RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CHTF8P0CG12 524 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 RPL29P47914 159 aaKnown RBP4.4□□□□□ -1.71
HDAC1-204ENST00000471488 TAS2R30P59541 319 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 UBE2L3P68036 154 aaKnown RBP4.4□□□□□ -1.71
HDAC1-204ENST00000471488 ZNF506Q5JVG8 444 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 CLPSL2Q6UWE3 100 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 GOLT1AQ6ZVE7 132 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 OR2G3Q8NGZ4 309 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 THAP6Q8TBB0 222 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 ENKURQ8TC29 256 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 C7orf33Q8WU49 177 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 KCNS1Q96KK3 526 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 FLVCR2Q9UPI3 526 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 TRBV7-9A0A0J9YWB2 115 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 EIF3GO75821 320 aaKnown RBP eCLIP4.39□□□□□ -1.71
HDAC1-204ENST00000471488 PVALBP20472 110 aaPredicted RBP4.39□□□□□ -1.71
HDAC1-204ENST00000471488 S100A4P26447 101 aaKnown RBP4.39□□□□□ -1.71
HDAC1-204ENST00000471488 Q0VG73 95 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 SPANXN2Q5MJ10 180 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 FAM74A4Q5TZK3 123 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 CFAP161Q6P656 301 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 STX12Q86Y82 276 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 C14orf178Q8N769 122 aaPredicted RBP4.39□□□□□ -1.71
HDAC1-204ENST00000471488 TMEM75Q8N9X5 138 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 LYPD6BQ8NI32 183 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 FXYD5Q96DB9 178 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 Q9UF83 564 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 KIF25-AS1Q9Y6Z4 181 aa4.39□□□□□ -1.71
HDAC1-204ENST00000471488 A0A087WWL8 130 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 A0A087WYN8 130 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 hDV102S1A0JD36 115 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 RBAKDNA6NC62 111 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 CIDEAO60543 219 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 FGF8P55075 233 aaPredicted RBP4.38□□□□□ -1.71
HDAC1-204ENST00000471488 HBG1P69891 147 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 HBG2P69892 147 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 AKAP14Q86UN6 197 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 C9orf163Q8N9P6 203 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 FAM167A-AS1Q96KT0 104 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 LINC01600Q96MT4 127 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 NDFIP1Q9BT67 221 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 NPCDR1Q9BY65 106 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 JPT2Q9H910 190 aa4.38□□□□□ -1.71
HDAC1-204ENST00000471488 IGHV3-64A0A075B6Q5 118 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 IGSF23A1L1A6 192 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 S100A11P31949 105 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 SULT1A1P50225 295 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 GNG5P63218 68 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 FAM74A1Q5RGS3 127 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 DGAT2L7PQ6IED9 249 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 WDR73Q6P4I2 378 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 REG3GQ6UW15 175 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 ENHOQ6UWT2 76 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 OR10G9Q8NGN4 311 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 CHCHD5Q9BSY4 110 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 PARLQ9H300 379 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 LENEPQ9Y5L5 61 aa4.37□□□□□ -1.71
HDAC1-204ENST00000471488 IGLV10-54A0A075B6I4 117 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 IGKV2-24A0A0C4DH68 120 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 A0A0J9YXV3 536 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 A8MWV9 139 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 NOL3O60936 208 aaKnown RBP4.36□□□□□ -1.71
HDAC1-204ENST00000471488 GCGP01275 180 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 RAB5CP51148 216 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 RPL19P84098 196 aaKnown RBP4.36□□□□□ -1.71
HDAC1-204ENST00000471488 MAJINQ3KP22 176 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 ZFP69Q49AA0 526 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 MPV17L2Q567V2 206 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 SDIM1Q6ZPB5 146 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 TRIM63Q969Q1 353 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 AP5S1Q9NUS5 200 aa4.36□□□□□ -1.71
HDAC1-204ENST00000471488 A0A0U1RQV1 116 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 TAAR5O14804 337 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 SNAPINO95295 136 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 SMIM18P0DKX4 95 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 ZNF80P51504 273 aaPredicted RBP4.35□□□□□ -1.71
HDAC1-204ENST00000471488 KHDC3LQ587J8 217 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 TRIQKQ629K1 86 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 LINC00518Q8N0U6 118 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 TMEM252Q8N6L7 170 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 TVP23CQ96ET8 276 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 C9orf85Q96MD7 179 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 C11orf21Q9P2W6 132 aa4.35□□□□□ -1.71
HDAC1-204ENST00000471488 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.34□□□□□ -1.71
HDAC1-204ENST00000471488 C17orf112F2Z3M2 114 aa4.34□□□□□ -1.71
HDAC1-204ENST00000471488 HMGB3O15347 200 aaKnown RBP4.34□□□□□ -1.71
HDAC1-204ENST00000471488 NDUFB6O95139 128 aa4.34□□□□□ -1.71
HDAC1-204ENST00000471488 PTTG1O95997 202 aa4.34□□□□□ -1.71
HDAC1-204ENST00000471488 LINC00694P0DN24 101 aa4.34□□□□□ -1.71
HDAC1-204ENST00000471488 RNASE3P12724 160 aaKnown RBP4.34□□□□□ -1.71
HDAC1-204ENST00000471488 TAS2R45P59539 299 aa4.34□□□□□ -1.71
HDAC1-204ENST00000471488 PRR3P79522 188 aaKnown RBP4.34□□□□□ -1.71
HDAC1-204ENST00000471488 RPL36AP83881 106 aaKnown RBP4.34□□□□□ -1.71
HDAC1-204ENST00000471488 IFITM2Q01629 132 aa4.34□□□□□ -1.71
HDAC1-204ENST00000471488 NHLH2Q02577 135 aa4.34□□□□□ -1.71
HDAC1-204ENST00000471488 ATP6V1FQ16864 119 aa4.34□□□□□ -1.71
HDAC1-204ENST00000471488 ATRAIDQ6UW56 229 aa4.34□□□□□ -1.71
HDAC1-204ENST00000471488 ZFP2Q6ZN57 461 aa4.34□□□□□ -1.71
HDAC1-204ENST00000471488 PRNTQ86SH4 94 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms