RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 BCL2L15Q5TBC7 163 aa1.74□□□□□ -2.13
VPS13A-210ENST00000471439 ZFP82Q8N141 532 aa1.74□□□□□ -2.13
VPS13A-210ENST00000471439 GDPD1Q8N9F7 314 aa1.74□□□□□ -2.13
VPS13A-210ENST00000471439 OR8D4Q8NGM9 314 aa1.74□□□□□ -2.13
VPS13A-210ENST00000471439 LGALS14Q8TCE9 139 aa1.74□□□□□ -2.13
VPS13A-210ENST00000471439 PP6455Q8WZ26 134 aa1.74□□□□□ -2.13
VPS13A-210ENST00000471439 ADAT3Q96EY9 351 aaPredicted RBP1.74□□□□□ -2.13
VPS13A-210ENST00000471439 VAPAQ9P0L0 249 aa1.74□□□□□ -2.13
VPS13A-210ENST00000471439 OR52A1Q9UKL2 312 aa1.74□□□□□ -2.13
VPS13A-210ENST00000471439 A8MWP4 228 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 H7BYZ3 331 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 CYB5BO43169 146 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 GNG7O60262 68 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 BPGMP07738 259 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 SFTA3P0C7M3 94 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 ALOX5APP20292 161 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 PSMB3P49720 205 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 RBM11P57052 281 aaKnown RBP1.73□□□□□ -2.13
VPS13A-210ENST00000471439 TSPAN5P62079 268 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 PSG3Q16557 428 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 ACSM3Q53FZ2 586 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 PYDC2Q56P42 97 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 AMMECR1LQ6DCA0 310 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 SFXN4Q6P4A7 337 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 ERICH5Q6P6B1 374 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 AMN1Q8IY45 258 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 MRPL30Q8TCC3 161 aaKnown RBP1.73□□□□□ -2.13
VPS13A-210ENST00000471439 TMEM203Q969S6 136 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 MROQ9BYG7 248 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 TTTY10Q9BZA0 68 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 VCX3AQ9NNX9 186 aa1.73□□□□□ -2.13
VPS13A-210ENST00000471439 MCRIP1C9JLW8 97 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 H3BP45 60 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 PGRMC1O00264 195 aaKnown RBP1.72□□□□□ -2.13
VPS13A-210ENST00000471439 RGS5O15539 181 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 COX7A2P2O60397 106 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 SPINK4O60575 86 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 OCM2P0CE71 109 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 OCMP0CE72 109 aaPredicted RBP1.72□□□□□ -2.13
VPS13A-210ENST00000471439 OR13C7P0DN81 318 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 RANBP1P43487 201 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 OR10A3P58181 314 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 DR1Q01658 176 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 WT1-ASQ06250 92 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 OR2F1Q13607 317 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 HMGN3Q15651 99 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 UBE2NLQ5JXB2 153 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 Q6ZQT7 251 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 NIT1Q86X76 327 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 DAND5Q8N907 189 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 GPR146Q96CH1 333 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 TSSK6Q9BXA6 273 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 DUSP21Q9H596 190 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 RPRMQ9NS64 109 aa1.72□□□□□ -2.13
VPS13A-210ENST00000471439 A0A0B4J2C4 111 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 A0A1B0GW15 77 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 I3L2K1 104 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 TPM3P06753 285 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 HTR2BP41595 481 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 EIF5AP63241 154 aaKnown RBP1.71□□□□□ -2.14
VPS13A-210ENST00000471439 TPBGQ13641 420 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 SAMD13Q5VXD3 122 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 GLYATQ6IB77 296 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 IQCF2Q8IXL9 164 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 C10orf67Q8IYJ2 551 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.71□□□□□ -2.14
VPS13A-210ENST00000471439 PXT1Q8NFP0 134 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 OR9I1Q8NGQ6 314 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 DYDC1Q8WWB3 177 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 YPEL4Q96NS1 127 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 CIB1Q99828 191 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 SIKE1Q9BRV8 207 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 DCUN1D5Q9BTE7 237 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 MRPL16Q9NX20 251 aaKnown RBP1.71□□□□□ -2.14
VPS13A-210ENST00000471439 ABRACLQ9P1F3 81 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 R4GMQ9 66 aa1.71□□□□□ -2.14
VPS13A-210ENST00000471439 RAB19A4D1S5 217 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 EVPLLA8MZ36 301 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 UPK2O00526 184 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 S100A2P29034 98 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 NUDT2P50583 147 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 POLR2JP52435 117 aaKnown RBP1.7□□□□□ -2.14
VPS13A-210ENST00000471439 PSME3P61289 254 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 SNRPGP62308 76 aaKnown RBP1.7□□□□□ -2.14
VPS13A-210ENST00000471439 CTAG1AP78358 180 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 MRPS25P82663 173 aaKnown RBP1.7□□□□□ -2.14
VPS13A-210ENST00000471439 VAMP3Q15836 100 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 MPV17LQ2QL34 196 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 CCDC153Q494R4 210 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 LAIR2Q6ISS4 152 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 ENHOQ6UWT2 76 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 OR10J5Q8NHC4 309 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 LRRC20Q8TCA0 184 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 APOL4Q9BPW4 351 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 ANAPC13Q9BS18 74 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 GABARAPL1Q9H0R8 117 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 GTSF1LQ9H1H1 148 aa1.7□□□□□ -2.14
VPS13A-210ENST00000471439 IGLV10-54A0A075B6I4 117 aa1.69□□□□□ -2.14
VPS13A-210ENST00000471439 M0QXV9 152 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms