RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TMEM208Q9BTX3 173 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 GFRA4Q9GZZ7 299 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 RNASE7Q9H1E1 156 aaKnown RBP9.64□□□□□ -0.87
HMGN1-211ENST00000471260 TP53TG3Q9ULZ0 132 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 EPDR1Q9UM22 224 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 MRPS12O15235 138 aaKnown RBP9.63□□□□□ -0.87
HMGN1-211ENST00000471260 SCGB1D1O95968 90 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 INSP01308 110 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 LINC00310P59036 64 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 PSG3Q16557 428 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 BPIFA4PQ86YQ2 179 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 RNF182Q8N6D2 247 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 OR8A1Q8NGG7 326 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 SLC50A1Q9BRV3 221 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 SAMD10Q9BYL1 202 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 PRO1933Q9H354 126 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 OTORQ9NRC9 128 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
HMGN1-211ENST00000471260 GRIFINA4D1Z8 144 aa9.62□□□□□ -0.87
HMGN1-211ENST00000471260 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
HMGN1-211ENST00000471260 PYYP10082 97 aa9.62□□□□□ -0.87
HMGN1-211ENST00000471260 MORN5Q5VZ52 161 aa9.62□□□□□ -0.87
HMGN1-211ENST00000471260 IGFL4Q6B9Z1 124 aa9.62□□□□□ -0.87
HMGN1-211ENST00000471260 LYPD1Q8N2G4 141 aa9.62□□□□□ -0.87
HMGN1-211ENST00000471260 MLST8Q9BVC4 326 aa9.62□□□□□ -0.87
HMGN1-211ENST00000471260 TRAV5A0A0B4J249 113 aa9.61□□□□□ -0.87
HMGN1-211ENST00000471260 APCSP02743 223 aa9.61□□□□□ -0.87
HMGN1-211ENST00000471260 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
HMGN1-211ENST00000471260 NBEAP1P0C6P0 100 aa9.61□□□□□ -0.87
HMGN1-211ENST00000471260 TSPOP30536 169 aa9.61□□□□□ -0.87
HMGN1-211ENST00000471260 SPINK13Q1W4C9 94 aa9.61□□□□□ -0.87
HMGN1-211ENST00000471260 ARL6IP6Q8N6S5 226 aa9.61□□□□□ -0.87
HMGN1-211ENST00000471260 PPP1R14DQ9NXH3 145 aa9.61□□□□□ -0.87
HMGN1-211ENST00000471260 DNAH6Q9C0G6 4158 aa9.6□□□□□ -0.87
HMGN1-211ENST00000471260 SERTM2A0A1B0GWG4 89 aa9.6□□□□□ -0.87
HMGN1-211ENST00000471260 A0A1B0GXF2 115 aa9.6□□□□□ -0.87
HMGN1-211ENST00000471260 LYRM9A8MSI8 78 aa9.6□□□□□ -0.87
HMGN1-211ENST00000471260 A8MWL6 223 aa9.6□□□□□ -0.87
HMGN1-211ENST00000471260 M0R2Z0 102 aa9.6□□□□□ -0.87
HMGN1-211ENST00000471260 ZNF324O75467 553 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-211ENST00000471260 LTAP01374 205 aa9.6□□□□□ -0.87
HMGN1-211ENST00000471260 GPX1P07203 203 aa9.6□□□□□ -0.87
HMGN1-211ENST00000471260 HIST1H1AQ02539 215 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-211ENST00000471260 POM121L12Q8N7R1 296 aa9.6□□□□□ -0.87
HMGN1-211ENST00000471260 RPP21Q9H633 154 aaKnown RBP9.6□□□□□ -0.87
HMGN1-211ENST00000471260 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 FBLL1A6NHQ2 334 aaKnown RBP9.59□□□□□ -0.87
HMGN1-211ENST00000471260 NPIPB6E9PJ23 425 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 ZNF253O75346 499 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 TCRAP04437 139 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 DAD1P61803 113 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 Q86TA4 180 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 NUDT10Q8NFP7 164 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 NUDT11Q96G61 164 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 VAMP8Q9BV40 100 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 Q9H3A6 140 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 VPS13DQ5THJ4 4388 aa9.59□□□□□ -0.87
HMGN1-211ENST00000471260 A0A1B0GW15 77 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 K7EQM0 130 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 M0R143 59 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 NUPR1O60356 82 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 IGLC2P0DOY2 106 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 SRIP30626 198 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 CDKN1BP46527 198 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 AMTP48728 403 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 HBBP68871 147 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 PDE6HQ13956 83 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 Q6AWC8 147 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 MRPL54Q6P161 138 aaKnown RBP9.58□□□□□ -0.88
HMGN1-211ENST00000471260 LINC00336Q6ZUF6 198 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 TMEM75Q8N9X5 138 aa9.58□□□□□ -0.88
HMGN1-211ENST00000471260 TRAV12-2A0A075B6T6 113 aa9.57□□□□□ -0.88
HMGN1-211ENST00000471260 C20orf202A1L168 122 aa9.57□□□□□ -0.88
HMGN1-211ENST00000471260 PGPA6NDG6 321 aa9.57□□□□□ -0.88
HMGN1-211ENST00000471260 TCL1AP56279 114 aa9.57□□□□□ -0.88
HMGN1-211ENST00000471260 PMCHL1Q16048 86 aa9.57□□□□□ -0.88
HMGN1-211ENST00000471260 NUP35Q8NFH5 326 aa9.57□□□□□ -0.88
HMGN1-211ENST00000471260 OR10J6PQ8NGY7 276 aa9.57□□□□□ -0.88
HMGN1-211ENST00000471260 C18orf32Q8TCD1 76 aa9.57□□□□□ -0.88
HMGN1-211ENST00000471260 LINC01587Q99440 93 aa9.57□□□□□ -0.88
HMGN1-211ENST00000471260 HIGD1CA8MV81 97 aa9.56□□□□□ -0.88
HMGN1-211ENST00000471260 P01737 135 aa9.56□□□□□ -0.88
HMGN1-211ENST00000471260 ZNF493Q6ZR52 646 aa9.56□□□□□ -0.88
HMGN1-211ENST00000471260 C15orf53Q8NAA6 179 aa9.56□□□□□ -0.88
HMGN1-211ENST00000471260 GATD1Q8NB37 220 aa9.56□□□□□ -0.88
HMGN1-211ENST00000471260 C16orf74Q96GX8 76 aa9.56□□□□□ -0.88
HMGN1-211ENST00000471260 MIEN1Q9BRT3 115 aa9.56□□□□□ -0.88
HMGN1-211ENST00000471260 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
HMGN1-211ENST00000471260 HTN3P15516 51 aa9.55□□□□□ -0.88
HMGN1-211ENST00000471260 PMCHP20382 165 aa9.55□□□□□ -0.88
HMGN1-211ENST00000471260 SLAQ13239 276 aa9.55□□□□□ -0.88
HMGN1-211ENST00000471260 LGALS9BQ3B8N2 356 aa9.55□□□□□ -0.88
HMGN1-211ENST00000471260 NHLRC2Q8NBF2 726 aa9.55□□□□□ -0.88
HMGN1-211ENST00000471260 BORCS7Q96B45 105 aa9.55□□□□□ -0.88
HMGN1-211ENST00000471260 CHCHD1Q96BP2 118 aaKnown RBP9.55□□□□□ -0.88
HMGN1-211ENST00000471260 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
HMGN1-211ENST00000471260 DNAH10Q8IVF4 4471 aa9.54□□□□□ -0.88
HMGN1-211ENST00000471260 PLAC8L1A1L4L8 177 aa9.54□□□□□ -0.88
HMGN1-211ENST00000471260 DIRC3C9JPN6 131 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms