RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 IBA57-AS1B1ANH7 110 aa2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 E7EUB6 86 aa2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 CCKP06307 115 aa2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 KRTDAPP60985 99 aa2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 RHOHQ15669 191 aa2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 ADIRFQ15847 76 aa2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 RPL7L1Q6DKI1 246 aaKnown RBP2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 FAM213BQ8TBF2 198 aa2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 TMEM254Q8TBM7 123 aa2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 THOC2Q8NI27 1593 aaKnown RBP2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 MYH8P13535 1937 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 SLIT3O75094 1523 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 IGLV10-54A0A075B6I4 117 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 IGKV2-28A0A075B6P5 120 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 IGHV3OR16-8A0A075B7F1 116 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 A6NIN4 97 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 HMSDA8MTL9 139 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 NUPR1O60356 82 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 IGKV2D-28P01615 120 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 UBE2G1P62253 170 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 OR8B3Q8NGG8 313 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 MGST2Q99735 147 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 RABAC1Q9UI14 185 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 S4R3C0 116 aa2.64□□□□□ -1.99
PRPF40A-206ENST00000471167 PLIN4Q96Q06 1357 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 MALRD1Q5VYJ5 2156 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 MON2Q7Z3U7 1717 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 IGKV1D-17A0A075B6S4 117 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 A0A087WSZ3 146 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 TRAV2A0A0B4J234 112 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 TRAV17A0A0B4J275 112 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 HINT1P49773 126 aaPredicted RBP2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 GNG11P61952 73 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 CCL8P80075 99 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 Q1T7F1 81 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 KPRPQ5T749 579 aaPredicted RBP2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 S100ZQ8WXG8 99 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 ST20Q9HBF5 79 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 MRPL35Q9NZE8 188 aaKnown RBP2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 SPCS1Q9Y6A9 102 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 DOCK9Q9BZ29 2069 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 MYO9BQ13459 2157 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 TOPAZ1Q8N9V7 1692 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 SCN3AQ9NY46 2000 aa2.63□□□□□ -1.99
PRPF40A-206ENST00000471167 SHANK3Q9BYB0 1731 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 HIVEP2P31629 2446 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 LAMC3Q9Y6N6 1575 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 PPLO60437 1756 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 DAPK1P53355 1430 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 TRAV10A0A0B4J240 114 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 H3BRM9 83 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 ERC2-IT1O76042 136 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 PRB4P10163 310 aaPredicted RBP2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 MIFP14174 115 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 SEC11AP67812 179 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 DEFB113Q30KQ7 82 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 LINC00483Q53H64 154 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 SLC48A1Q6P1K1 146 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 ZCCHC23Q6ZST2 131 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 MYOZ3Q8TDC0 251 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 PPDPFLQ8WWR9 84 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 LINC00474Q9P2X8 69 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 SCN4AP35499 1836 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 SLX4Q8IY92 1834 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 FANCAO15360 1455 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 GOLGA3Q08378 1498 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 MGAMO43451 1857 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 PRDM15P57071 1507 aaPredicted RBP2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 ARHGEF12Q9NZN5 1544 aa2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.62□□□□□ -1.99
PRPF40A-206ENST00000471167 ANK1P16157 1881 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 ZC3H13Q5T200 1668 aaKnown RBP2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 IGLV2-18A0A075B6J9 118 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 IGKV3D-11A0A0A0MRZ8 115 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 TCRBV4S1A1TA0A5B7 111 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 NAP1L6A6NFF2 107 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 ASAH2BP0C7U1 165 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 RNASE2P10153 161 aaKnown RBP2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 MIR22HGQ0VDD5 57 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 C9orf116Q5BN46 136 aaPredicted RBP2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 SPTSSBQ8NFR3 76 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 OR10AG1Q8NH19 301 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 HIGD2AQ9BW72 106 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 EPRSP07814 1512 aaKnown RBP2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 KIAA1549Q9HCM3 1950 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 RGPD4Q7Z3J3 1758 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 CASZ1Q86V15 1759 aa2.61□□□□□ -1.99
PRPF40A-206ENST00000471167 COL27A1Q8IZC6 1860 aaPredicted RBP2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 NLRP1Q9C000 1473 aa2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 CCDC88CQ9P219 2028 aa2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 CRYM-AS1A6NIL9 109 aa2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 ODF3BA8MYP8 253 aa2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 PSCAO43653 123 aa2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 ERHP84090 104 aaKnown RBP2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 ZNF791Q3KP31 576 aaPredicted RBP2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 SPINT4Q6UDR6 99 aa2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 SERP2Q8N6R1 65 aa2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 Q8TAT8 98 aa2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 CACFD1Q9UGQ2 172 aa2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 DIP2BQ9P265 1576 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms