RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 NPIPB6E9PJ23 425 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 PRTN3P24158 256 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 CR1LQ2VPA4 569 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 TRAV2A0A0B4J234 112 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 OVOL3O00110 214 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 CRXO43186 299 aaPredicted RBP8.33□□□□□ -1.08
CHD3-208ENST00000470531 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 IGHV4-39P01824 125 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 ASIPP42127 132 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 PAX8Q06710 450 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 LAGE3Q14657 143 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 DGAT2L7PQ6IED9 249 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 CEACAM4O75871 244 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 CDSNQ15517 529 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 H3BUX3 64 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 IGLV1-47P01700 117 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 HLA-DRB4P13762 266 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 NXT2Q9NPJ8 142 aaKnown RBP8.32□□□□□ -1.08
CHD3-208ENST00000470531 HLA-DRB4X5D2U9 266 aa8.32□□□□□ -1.08
CHD3-208ENST00000470531 CTSGP08311 255 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 SLC25A16P16260 332 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 HOXB4P17483 251 aaPredicted RBP8.31□□□□□ -1.08
CHD3-208ENST00000470531 JPT2Q9H910 190 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 ATP5LO75964 103 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 SRSF1Q07955 248 aaKnown RBP eCLIP8.31□□□□□ -1.08
CHD3-208ENST00000470531 PSMG4Q5JS54 123 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 LINC01545Q5VT33 79 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 C10orf126Q8N4M7 172 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 OR4X2Q8NGF9 303 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 PRSS22Q9GZN4 317 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 GFRA4Q9GZZ7 299 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 KLK9Q9UKQ9 250 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 ZFP36P26651 326 aaKnown RBP8.31□□□□□ -1.08
CHD3-208ENST00000470531 IGF2-ASQ6U949 168 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 ZNF625Q96I27 306 aaPredicted RBP8.31□□□□□ -1.08
CHD3-208ENST00000470531 KLF12Q9Y4X4 402 aa8.31□□□□□ -1.08
CHD3-208ENST00000470531 RAI1Q7Z5J4 1906 aaPredicted RBP8.31□□□□□ -1.08
CHD3-208ENST00000470531 TRBV25-1A0A075B6N4 114 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 NRGNQ92686 78 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 FANCD2OSQ96PS1 177 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 TRAV8-2A0A0B4J237 113 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 LINC01549A6NIU2 74 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 TRBV12-3P01733 135 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 CT83Q5H943 113 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 INSL3P51460 131 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 IGFL2Q6UWQ7 119 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 Q8NA96 180 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 KIR2DL4Q99706 377 aa8.3□□□□□ -1.08
CHD3-208ENST00000470531 A0A1W2PRX2 142 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 BRI3O95415 125 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 FSTL3O95633 263 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
CHD3-208ENST00000470531 PIP4P1Q86T03 277 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 PTH2Q96A98 100 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 CCDC179H3BU77 68 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 IGLV2-11P01706 119 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 MYCNOSP40205 109 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 HERVK_113P61574 105 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 OR9G4Q8NGQ1 327 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 TRAV41A0A0B4J266 112 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 HOXA3O43365 443 aaPredicted RBP8.29□□□□□ -1.08
CHD3-208ENST00000470531 TSPAN13O95857 204 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 LINC00311Q8N616 119 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 DUX3Q96PT4 197 aa8.29□□□□□ -1.08
CHD3-208ENST00000470531 IGHV7-81A0A0B4J1V7 117 aa8.28□□□□□ -1.08
CHD3-208ENST00000470531 BLCAPP62952 87 aa8.28□□□□□ -1.08
CHD3-208ENST00000470531 PIP4P2Q8N4L2 257 aa8.28□□□□□ -1.08
CHD3-208ENST00000470531 OR13C6PQ8NH95 151 aa8.28□□□□□ -1.08
CHD3-208ENST00000470531 C2orf66Q6UXQ4 117 aa8.28□□□□□ -1.08
CHD3-208ENST00000470531 C1orf43Q9BWL3 253 aa8.28□□□□□ -1.08
CHD3-208ENST00000470531 FASNP49327 2511 aaKnown RBP8.28□□□□□ -1.08
CHD3-208ENST00000470531 SRSF2Q01130 221 aaKnown RBP8.28□□□□□ -1.08
CHD3-208ENST00000470531 SPINK13Q1W4C9 94 aa8.28□□□□□ -1.08
CHD3-208ENST00000470531 FGF6P10767 208 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 RPL39P62891 51 aaKnown RBP8.27□□□□□ -1.09
CHD3-208ENST00000470531 LYRM7Q5U5X0 104 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 OPRPNQ99935 248 aaPredicted RBP8.27□□□□□ -1.09
CHD3-208ENST00000470531 RHPN1-AS1Q9BWJ2 59 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 A0A096LNJ9 63 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 F8W1H4 67 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 LGALS9BQ3B8N2 356 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 LGALS9CQ6DKI2 356 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 PHLDA1Q8WV24 401 aaPredicted RBP8.27□□□□□ -1.09
CHD3-208ENST00000470531 PRADC1Q9BSG0 188 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 ITPR1Q14643 2758 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 IGHV3-16A0A0C4DH30 117 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 UFSP1Q6NVU6 142 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 IGFL3Q6UXB1 125 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 UNQ9165/PRO28630Q6UXU0 137 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 TP53TG1Q9Y2A0 90 aa8.27□□□□□ -1.09
CHD3-208ENST00000470531 IFITM1P13164 125 aa8.26□□□□□ -1.09
CHD3-208ENST00000470531 TMEM14CQ9P0S9 112 aa8.26□□□□□ -1.09
CHD3-208ENST00000470531 IGHV3-38A0A0C4DH36 116 aa8.26□□□□□ -1.09
CHD3-208ENST00000470531 Q6ZUT4 128 aa8.26□□□□□ -1.09
CHD3-208ENST00000470531 MAPKAPK5-AS1Q8N8E1 139 aa8.26□□□□□ -1.09
CHD3-208ENST00000470531 LYPD1Q8N2G4 141 aa8.26□□□□□ -1.09
CHD3-208ENST00000470531 PRO3102Q9H379 93 aa8.26□□□□□ -1.09
CHD3-208ENST00000470531 SPANXB1Q9NS25 103 aaPredicted RBP8.26□□□□□ -1.09
CHD3-208ENST00000470531 IGHV3-53P01767 116 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms