RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 OCC1Q8TAD7 63 aa13.45□□□□□ -0.26
USP11-205ENST00000467378 RASL10AQ92737 203 aa13.45□□□□□ -0.26
USP11-205ENST00000467378 PKHD1P08F94 4074 aa13.45□□□□□ -0.26
USP11-205ENST00000467378 C19orf71A6NCJ1 209 aa13.44□□□□□ -0.26
USP11-205ENST00000467378 M0R2P5 195 aa13.44□□□□□ -0.26
USP11-205ENST00000467378 CEBPGP53567 150 aa13.44□□□□□ -0.26
USP11-205ENST00000467378 PEA15Q15121 130 aa13.44□□□□□ -0.26
USP11-205ENST00000467378 SMDT1Q9H4I9 107 aa13.44□□□□□ -0.26
USP11-205ENST00000467378 TMSB15BA0A087X1C1 80 aa13.43□□□□□ -0.26
USP11-205ENST00000467378 GRIFINA4D1Z8 144 aa13.43□□□□□ -0.26
USP11-205ENST00000467378 IGLL5B9A064 214 aa13.43□□□□□ -0.26
USP11-205ENST00000467378 ASIPP42127 132 aa13.43□□□□□ -0.26
USP11-205ENST00000467378 TRGV2A0A075B6R0 118 aa13.42□□□□□ -0.26
USP11-205ENST00000467378 K7EN84 100 aa13.42□□□□□ -0.26
USP11-205ENST00000467378 S100A4P26447 101 aaKnown RBP13.42□□□□□ -0.26
USP11-205ENST00000467378 RPL19P84098 196 aaKnown RBP13.42□□□□□ -0.26
USP11-205ENST00000467378 OR5I1Q13606 314 aa13.42□□□□□ -0.26
USP11-205ENST00000467378 PTH2Q96A98 100 aa13.42□□□□□ -0.26
USP11-205ENST00000467378 BIN3Q9NQY0 253 aa13.42□□□□□ -0.26
USP11-205ENST00000467378 IL36BQ9NZH7 164 aa13.42□□□□□ -0.26
USP11-205ENST00000467378 NACAE9PAV3 2078 aa13.42□□□□□ -0.26
USP11-205ENST00000467378 IGHV4-4A0A075B6R2 117 aa13.41□□□□□ -0.26
USP11-205ENST00000467378 F5H768 121 aa13.41□□□□□ -0.26
USP11-205ENST00000467378 CXCL1P09341 107 aa13.41□□□□□ -0.26
USP11-205ENST00000467378 ARMS2P0C7Q2 107 aa13.41□□□□□ -0.26
USP11-205ENST00000467378 TCTAP57738 103 aa13.41□□□□□ -0.26
USP11-205ENST00000467378 SMIM7Q9BQ49 75 aa13.41□□□□□ -0.26
USP11-205ENST00000467378 APLNQ9ULZ1 77 aa13.41□□□□□ -0.26
USP11-205ENST00000467378 LY96Q9Y6Y9 160 aa13.41□□□□□ -0.26
USP11-205ENST00000467378 PRSS29PA6NIE9 313 aa13.4□□□□□ -0.26
USP11-205ENST00000467378 ZNF727A8MUV8 499 aa13.4□□□□□ -0.26
USP11-205ENST00000467378 HOXA5P20719 270 aa13.4□□□□□ -0.26
USP11-205ENST00000467378 POM121L12Q8N7R1 296 aa13.4□□□□□ -0.26
USP11-205ENST00000467378 DAZAP1Q96EP5 407 aaKnown RBP13.4□□□□□ -0.26
USP11-205ENST00000467378 FAM210BQ96KR6 192 aa13.4□□□□□ -0.26
USP11-205ENST00000467378 FAT2Q9NYQ8 4349 aa13.39□□□□□ -0.27
USP11-205ENST00000467378 H3BVH4 76 aa13.39□□□□□ -0.27
USP11-205ENST00000467378 ZNF876PQ49A33 203 aa13.39□□□□□ -0.27
USP11-205ENST00000467378 NUDT10Q8NFP7 164 aa13.39□□□□□ -0.27
USP11-205ENST00000467378 NUDT11Q96G61 164 aa13.39□□□□□ -0.27
USP11-205ENST00000467378 SCRT2Q9NQ03 307 aa13.39□□□□□ -0.27
USP11-205ENST00000467378 FAM74A3Q4VXF1 159 aa13.38□□□□□ -0.27
USP11-205ENST00000467378 DNAH17Q9UFH2 4485 aa13.37□□□□□ -0.27
USP11-205ENST00000467378 P01737 135 aa13.37□□□□□ -0.27
USP11-205ENST00000467378 IGHV3-53P01767 116 aa13.37□□□□□ -0.27
USP11-205ENST00000467378 TMEM88Q6PEY1 159 aa13.37□□□□□ -0.27
USP11-205ENST00000467378 OR2D3Q8NGH3 330 aa13.37□□□□□ -0.27
USP11-205ENST00000467378 NDUFAF3Q9BU61 184 aa13.37□□□□□ -0.27
USP11-205ENST00000467378 DNAH2Q9P225 4427 aa13.37□□□□□ -0.27
USP11-205ENST00000467378 DYNC1H1Q14204 4646 aaKnown RBP13.36□□□□□ -0.27
USP11-205ENST00000467378 TRAV4A0A0B4J268 109 aa13.36□□□□□ -0.27
USP11-205ENST00000467378 FHL2Q14192 279 aa13.36□□□□□ -0.27
USP11-205ENST00000467378 PIK3CD-AS1Q5SR53 167 aa13.36□□□□□ -0.27
USP11-205ENST00000467378 LINC01551Q86U37 167 aa13.36□□□□□ -0.27
USP11-205ENST00000467378 ZNF479Q96JC4 524 aa13.36□□□□□ -0.27
USP11-205ENST00000467378 SSBP4Q9BWG4 385 aaPredicted RBP13.36□□□□□ -0.27
USP11-205ENST00000467378 RNASE7Q9H1E1 156 aaKnown RBP13.36□□□□□ -0.27
USP11-205ENST00000467378 DNAH11Q96DT5 4516 aa13.36□□□□□ -0.27
USP11-205ENST00000467378 RS1O15537 224 aa13.35□□□□□ -0.27
USP11-205ENST00000467378 SNAI2O43623 268 aa13.35□□□□□ -0.27
USP11-205ENST00000467378 SFTA3P0C7M3 94 aa13.35□□□□□ -0.27
USP11-205ENST00000467378 RPS20P60866 119 aaKnown RBP13.35□□□□□ -0.27
USP11-205ENST00000467378 TMEM241Q24JQ0 296 aa13.35□□□□□ -0.27
USP11-205ENST00000467378 DMRTA1Q5VZB9 504 aa13.35□□□□□ -0.27
USP11-205ENST00000467378 FAM231DQ6ZW35 169 aa13.35□□□□□ -0.27
USP11-205ENST00000467378 OR4C5Q8NGB2 326 aa13.35□□□□□ -0.27
USP11-205ENST00000467378 GZMBP10144 247 aa13.34□□□□□ -0.27
USP11-205ENST00000467378 PHLDA3Q9Y5J5 127 aa13.34□□□□□ -0.27
USP11-205ENST00000467378 TRAV26-1A0A087WT03 109 aa13.33□□□□□ -0.28
USP11-205ENST00000467378 OR5AL1P0C617 328 aa13.33□□□□□ -0.28
USP11-205ENST00000467378 IGLC6P0CF74 106 aa13.33□□□□□ -0.28
USP11-205ENST00000467378 SOHLH1Q5JUK2 328 aa13.33□□□□□ -0.28
USP11-205ENST00000467378 CFAP126Q5VTH2 177 aa13.33□□□□□ -0.28
USP11-205ENST00000467378 VSIG2Q96IQ7 327 aa13.33□□□□□ -0.28
USP11-205ENST00000467378 RPP21Q9H633 154 aaKnown RBP13.33□□□□□ -0.28
USP11-205ENST00000467378 A0A0J9YY99 117 aa13.32□□□□□ -0.28
USP11-205ENST00000467378 RTL8CO15255 209 aa13.32□□□□□ -0.28
USP11-205ENST00000467378 RPL23P62829 140 aaKnown RBP13.32□□□□□ -0.28
USP11-205ENST00000467378 C15orf53Q8NAA6 179 aa13.32□□□□□ -0.28
USP11-205ENST00000467378 SYT8Q8NBV8 401 aa13.32□□□□□ -0.28
USP11-205ENST00000467378 JPT2Q9H910 190 aa13.32□□□□□ -0.28
USP11-205ENST00000467378 NAT8Q9UHE5 227 aa13.32□□□□□ -0.28
USP11-205ENST00000467378 PKD1P98161 4303 aa13.31□□□□□ -0.28
USP11-205ENST00000467378 TRGV4A0A0C4DH28 118 aa13.31□□□□□ -0.28
USP11-205ENST00000467378 XKRY2A2RUG3 117 aa13.31□□□□□ -0.28
USP11-205ENST00000467378 H3BNG1 76 aa13.31□□□□□ -0.28
USP11-205ENST00000467378 GATCO43716 136 aaKnown RBP13.31□□□□□ -0.28
USP11-205ENST00000467378 CIDEAO60543 219 aa13.31□□□□□ -0.28
USP11-205ENST00000467378 SLAQ13239 276 aa13.31□□□□□ -0.28
USP11-205ENST00000467378 ZFP82Q8N141 532 aa13.31□□□□□ -0.28
USP11-205ENST00000467378 OR10AG1Q8NH19 301 aa13.31□□□□□ -0.28
USP11-205ENST00000467378 PRO0255Q9UI72 69 aa13.31□□□□□ -0.28
USP11-205ENST00000467378 HHLA3Q9XRX5 114 aa13.31□□□□□ -0.28
USP11-205ENST00000467378 A8MWV9 139 aa13.3□□□□□ -0.28
USP11-205ENST00000467378 M0R381 172 aa13.3□□□□□ -0.28
USP11-205ENST00000467378 CRYBA4P53673 196 aa13.3□□□□□ -0.28
USP11-205ENST00000467378 ERVFC1-1P60608 527 aa13.3□□□□□ -0.28
USP11-205ENST00000467378 FER1L6-AS1Q8NA97 138 aa13.3□□□□□ -0.28
USP11-205ENST00000467378 ISOC2Q96AB3 205 aa13.3□□□□□ -0.28
USP11-205ENST00000467378 SFRP2Q96HF1 295 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms