RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 PLNP26678 52 aa11.15□□□□□ -0.62
PRPF38B-204ENST00000467302 LINC00477Q96M19 166 aa11.15□□□□□ -0.62
PRPF38B-204ENST00000467302 TRAV12-1A0A0B4J245 112 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 SOCS3O14543 225 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 TGFAP01135 160 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 FBN2P35556 2912 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 H3BUA1 57 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 BRI3O95415 125 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 ARL3P36405 182 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 Q5PR19 223 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 MAPK1IP1LQ8NDC0 245 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 RASL10AQ92737 203 aa11.14□□□□□ -0.63
PRPF38B-204ENST00000467302 CELSR1Q9NYQ6 3014 aa11.13□□□□□ -0.63
PRPF38B-204ENST00000467302 BLCAPP62952 87 aa11.13□□□□□ -0.63
PRPF38B-204ENST00000467302 H7C1H1 209 aa11.13□□□□□ -0.63
PRPF38B-204ENST00000467302 TRBV12-3P01733 135 aa11.13□□□□□ -0.63
PRPF38B-204ENST00000467302 TAL2Q16559 108 aa11.13□□□□□ -0.63
PRPF38B-204ENST00000467302 TOMM6Q96B49 74 aa11.13□□□□□ -0.63
PRPF38B-204ENST00000467302 FAM19A4Q96LR4 140 aa11.13□□□□□ -0.63
PRPF38B-204ENST00000467302 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
PRPF38B-204ENST00000467302 TRAV21A0A0B4J279 112 aa11.12□□□□□ -0.63
PRPF38B-204ENST00000467302 F8VRH5 84 aa11.12□□□□□ -0.63
PRPF38B-204ENST00000467302 NDUFA4O00483 81 aa11.12□□□□□ -0.63
PRPF38B-204ENST00000467302 OVOL1O14753 267 aa11.12□□□□□ -0.63
PRPF38B-204ENST00000467302 IGHV4-31P0DP07 118 aa11.12□□□□□ -0.63
PRPF38B-204ENST00000467302 SUMO2P61956 95 aaKnown RBP11.12□□□□□ -0.63
PRPF38B-204ENST00000467302 ORMDL2Q53FV1 153 aa11.12□□□□□ -0.63
PRPF38B-204ENST00000467302 NHP2Q9NX24 153 aaKnown RBP11.12□□□□□ -0.63
PRPF38B-204ENST00000467302 DEFB112Q30KQ8 113 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 OR10J6PQ8NGY7 276 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 E9PLD3 99 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 J3KRW8 73 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 K7EMI3 77 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 M0R381 172 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 SPRY2O43597 315 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 Q6ZS46 218 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 USMG5Q96IX5 58 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 DPH3P1Q9H4G8 78 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 ZNF580Q9UK33 172 aa11.11□□□□□ -0.63
PRPF38B-204ENST00000467302 CR1P17927 2039 aa11.1□□□□□ -0.63
PRPF38B-204ENST00000467302 FSHBP01225 129 aa11.1□□□□□ -0.63
PRPF38B-204ENST00000467302 MED14OSP0DP75 135 aa11.1□□□□□ -0.63
PRPF38B-204ENST00000467302 ASIPP42127 132 aa11.1□□□□□ -0.63
PRPF38B-204ENST00000467302 APRG1Q8IVJ8 170 aa11.1□□□□□ -0.63
PRPF38B-204ENST00000467302 NEXN-AS1Q8NBZ9 246 aa11.1□□□□□ -0.63
PRPF38B-204ENST00000467302 SCGB3A1Q96QR1 104 aa11.1□□□□□ -0.63
PRPF38B-204ENST00000467302 DEFB1P60022 68 aa11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 ANXA2RQ3ZCQ2 193 aa11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 RPL39LQ96EH5 51 aaKnown RBP11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 PTPN13Q12923 2485 aa11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 USP9YO00507 2555 aaPredicted RBP11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 POLQO75417 2590 aa11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 CENPEQ02224 2701 aa11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 IGLL5B9A064 214 aa11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 LINC01619G3V211 115 aa11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 IGHV4-59P01825 116 aa11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 PF4V1P10720 104 aa11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 S100A4P26447 101 aaKnown RBP11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 RIPPLY3P57055 190 aa11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 C14orf178Q8N769 122 aaPredicted RBP11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 CHTOPQ9Y3Y2 248 aaKnown RBP11.09□□□□□ -0.63
PRPF38B-204ENST00000467302 TRBV7-3A0A075B6L6 115 aa11.08□□□□□ -0.64
PRPF38B-204ENST00000467302 C12orf74Q32Q52 190 aa11.08□□□□□ -0.64
PRPF38B-204ENST00000467302 PHLDA3Q9Y5J5 127 aa11.08□□□□□ -0.64
PRPF38B-204ENST00000467302 TRBV7-9A0A0J9YWB2 115 aa11.08□□□□□ -0.64
PRPF38B-204ENST00000467302 RNASE3P12724 160 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-204ENST00000467302 PLA2G2AP14555 144 aa11.08□□□□□ -0.64
PRPF38B-204ENST00000467302 POM121L12Q8N7R1 296 aa11.08□□□□□ -0.64
PRPF38B-204ENST00000467302 Q96MF0 132 aa11.08□□□□□ -0.64
PRPF38B-204ENST00000467302 KLK15Q9H2R5 256 aa11.08□□□□□ -0.64
PRPF38B-204ENST00000467302 CSMD2Q7Z408 3487 aa11.07□□□□□ -0.64
PRPF38B-204ENST00000467302 MYMXA0A1B0GTQ4 84 aa11.07□□□□□ -0.64
PRPF38B-204ENST00000467302 IGLV1-40P01703 118 aa11.07□□□□□ -0.64
PRPF38B-204ENST00000467302 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
PRPF38B-204ENST00000467302 FOXI2Q6ZQN5 318 aa11.07□□□□□ -0.64
PRPF38B-204ENST00000467302 BAALCQ8WXS3 180 aa11.07□□□□□ -0.64
PRPF38B-204ENST00000467302 HIST1H4GQ99525 98 aa11.07□□□□□ -0.64
PRPF38B-204ENST00000467302 CSPG4Q6UVK1 2322 aa11.07□□□□□ -0.64
PRPF38B-204ENST00000467302 A0A1B0GWB2 263 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 OR11H12B2RN74 326 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 J3QKU1 62 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 GNRH2O43555 120 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 NXPH4O95158 308 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 CFHR3Q02985 330 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 C2orf66Q6UXQ4 117 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 KRTAP1-3Q8IUG1 177 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 OR11H1Q8NG94 326 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 OR11H2Q8NH07 326 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 PRRC2AP48634 2157 aaKnown RBP11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 AGRNO00468 2067 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 NAV2Q8IVL1 2488 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 F6UB75 175 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 IGHV3-11P01762 117 aa11.06□□□□□ -0.64
PRPF38B-204ENST00000467302 KMT2BQ9UMN6 2715 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-204ENST00000467302 ZNF479Q96JC4 524 aa11.05□□□□□ -0.64
PRPF38B-204ENST00000467302 VPREB3Q9UKI3 123 aa11.05□□□□□ -0.64
PRPF38B-204ENST00000467302 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms