RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SNAI2O43623 268 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 GAGE7O76087 117 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 ARMS2P0C7Q2 107 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 GAGE12FP0CL80 117 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 GAGE12GP0CL81 117 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 GAGE12IP0CL82 117 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 ERVFC1-1P60608 527 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 CT83Q5H943 113 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 PHLDA1Q8WV24 401 aaPredicted RBP11.34□□□□□ -0.59
GPC1-207ENST00000466624 SSBP4Q9BWG4 385 aaPredicted RBP11.34□□□□□ -0.59
GPC1-207ENST00000466624 MRPL16Q9NX20 251 aaKnown RBP11.34□□□□□ -0.59
GPC1-207ENST00000466624 NUPR2A6NF83 97 aa11.33□□□□□ -0.6
GPC1-207ENST00000466624 GATCO43716 136 aaKnown RBP11.33□□□□□ -0.6
GPC1-207ENST00000466624 ATP5G1P05496 136 aa11.33□□□□□ -0.6
GPC1-207ENST00000466624 OR5AL1P0C617 328 aa11.33□□□□□ -0.6
GPC1-207ENST00000466624 PNRC1Q12796 327 aaPredicted RBP11.33□□□□□ -0.6
GPC1-207ENST00000466624 ADIRFQ15847 76 aa11.33□□□□□ -0.6
GPC1-207ENST00000466624 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
GPC1-207ENST00000466624 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
GPC1-207ENST00000466624 ZNF876PQ49A33 203 aa11.32□□□□□ -0.6
GPC1-207ENST00000466624 C15orf54Q8N8G6 183 aa11.32□□□□□ -0.6
GPC1-207ENST00000466624 SFRP2Q96HF1 295 aa11.32□□□□□ -0.6
GPC1-207ENST00000466624 DYNC2H1Q8NCM8 4307 aaKnown RBP11.32□□□□□ -0.6
GPC1-207ENST00000466624 DEFB131BA0A096LNP1 70 aa11.31□□□□□ -0.6
GPC1-207ENST00000466624 A0A1W2PPQ1 181 aa11.31□□□□□ -0.6
GPC1-207ENST00000466624 CEMP1Q6PRD7 247 aaPredicted RBP11.31□□□□□ -0.6
GPC1-207ENST00000466624 SYT8Q8NBV8 401 aa11.31□□□□□ -0.6
GPC1-207ENST00000466624 SEC11CQ9BY50 192 aa11.31□□□□□ -0.6
GPC1-207ENST00000466624 PHLDA3Q9Y5J5 127 aa11.31□□□□□ -0.6
GPC1-207ENST00000466624 NACAE9PAV3 2078 aa11.31□□□□□ -0.6
GPC1-207ENST00000466624 TRAV4A0A0B4J268 109 aa11.3□□□□□ -0.6
GPC1-207ENST00000466624 A8MWL6 223 aa11.3□□□□□ -0.6
GPC1-207ENST00000466624 CIDEAO60543 219 aa11.3□□□□□ -0.6
GPC1-207ENST00000466624 NXPH4O95158 308 aa11.3□□□□□ -0.6
GPC1-207ENST00000466624 ADCYAP1P18509 176 aa11.3□□□□□ -0.6
GPC1-207ENST00000466624 ZFP82Q8N141 532 aa11.3□□□□□ -0.6
GPC1-207ENST00000466624 FER1L6-AS1Q8NA97 138 aa11.3□□□□□ -0.6
GPC1-207ENST00000466624 CSMD3Q7Z407 3707 aa11.29□□□□□ -0.6
GPC1-207ENST00000466624 FAM231BA6NCW3 169 aa11.29□□□□□ -0.6
GPC1-207ENST00000466624 F2Z2F3 143 aa11.29□□□□□ -0.6
GPC1-207ENST00000466624 F8W036 122 aa11.29□□□□□ -0.6
GPC1-207ENST00000466624 GZMBP10144 247 aa11.29□□□□□ -0.6
GPC1-207ENST00000466624 OR10G8Q8NGN5 311 aa11.29□□□□□ -0.6
GPC1-207ENST00000466624 FAM210BQ96KR6 192 aa11.29□□□□□ -0.6
GPC1-207ENST00000466624 GFRA4Q9GZZ7 299 aa11.29□□□□□ -0.6
GPC1-207ENST00000466624 KLK5Q9Y337 293 aaPredicted RBP11.29□□□□□ -0.6
GPC1-207ENST00000466624 V9GYV3 84 aa11.29□□□□□ -0.6
GPC1-207ENST00000466624 STARD9Q9P2P6 4700 aa11.29□□□□□ -0.6
GPC1-207ENST00000466624 A8MWV9 139 aa11.28□□□□□ -0.6
GPC1-207ENST00000466624 RS1O15537 224 aa11.28□□□□□ -0.6
GPC1-207ENST00000466624 CTRLP40313 264 aa11.28□□□□□ -0.6
GPC1-207ENST00000466624 FOXA3P55318 350 aaPredicted RBP11.28□□□□□ -0.6
GPC1-207ENST00000466624 C10orf91Q5T1B1 145 aa11.28□□□□□ -0.6
GPC1-207ENST00000466624 CASC10Q5T4H9 136 aa11.28□□□□□ -0.6
GPC1-207ENST00000466624 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
GPC1-207ENST00000466624 TSKUQ8WUA8 353 aa11.28□□□□□ -0.6
GPC1-207ENST00000466624 CACNG7P62955 275 aa11.27□□□□□ -0.61
GPC1-207ENST00000466624 ZFAND6Q6FIF0 208 aa11.27□□□□□ -0.61
GPC1-207ENST00000466624 WDR73Q6P4I2 378 aa11.27□□□□□ -0.61
GPC1-207ENST00000466624 POM121L12Q8N7R1 296 aa11.27□□□□□ -0.61
GPC1-207ENST00000466624 OR4C5Q8NGB2 326 aa11.27□□□□□ -0.61
GPC1-207ENST00000466624 OR10AG1Q8NH19 301 aa11.27□□□□□ -0.61
GPC1-207ENST00000466624 CNFNQ9BYD5 112 aa11.27□□□□□ -0.61
GPC1-207ENST00000466624 IGHV4-4A0A075B6R2 117 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 F5H768 121 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 M0R381 172 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 PPP1R2P9O14990 202 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 HTN3P15516 51 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 HOXA5P20719 270 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 TCTAP57738 103 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 CFAP126Q5VTH2 177 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 LYZL1Q6UWQ5 148 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 ZFP2Q6ZN57 461 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 GTSF1Q8WW33 167 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 ZNF479Q96JC4 524 aa11.26□□□□□ -0.61
GPC1-207ENST00000466624 CARHSP1Q9Y2V2 147 aaKnown RBP11.26□□□□□ -0.61
GPC1-207ENST00000466624 SLAQ13239 276 aa11.25□□□□□ -0.61
GPC1-207ENST00000466624 TPPP3Q9BW30 176 aa11.25□□□□□ -0.61
GPC1-207ENST00000466624 RHODO00212 210 aa11.24□□□□□ -0.61
GPC1-207ENST00000466624 IGHV3-53P01767 116 aa11.24□□□□□ -0.61
GPC1-207ENST00000466624 FHL2Q14192 279 aa11.24□□□□□ -0.61
GPC1-207ENST00000466624 ANAPC16Q96DE5 110 aa11.24□□□□□ -0.61
GPC1-207ENST00000466624 PLECQ15149 4684 aaKnown RBP11.23□□□□□ -0.61
GPC1-207ENST00000466624 H3BNG1 76 aa11.23□□□□□ -0.61
GPC1-207ENST00000466624 MT-ND4LP03901 98 aa11.23□□□□□ -0.61
GPC1-207ENST00000466624 NDUFA5Q16718 116 aa11.23□□□□□ -0.61
GPC1-207ENST00000466624 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
GPC1-207ENST00000466624 PRO0255Q9UI72 69 aa11.23□□□□□ -0.61
GPC1-207ENST00000466624 TRGV4A0A0C4DH28 118 aa11.22□□□□□ -0.61
GPC1-207ENST00000466624 SMIM27A0A1W2PRY6 76 aa11.22□□□□□ -0.61
GPC1-207ENST00000466624 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
GPC1-207ENST00000466624 IGLL5B9A064 214 aa11.22□□□□□ -0.61
GPC1-207ENST00000466624 RNF212Q495C1 297 aa11.22□□□□□ -0.61
GPC1-207ENST00000466624 TMEM88Q6PEY1 159 aa11.22□□□□□ -0.61
GPC1-207ENST00000466624 C15orf53Q8NAA6 179 aa11.22□□□□□ -0.61
GPC1-207ENST00000466624 AP1S3Q96PC3 154 aa11.22□□□□□ -0.61
GPC1-207ENST00000466624 JPT2Q9H910 190 aa11.22□□□□□ -0.61
GPC1-207ENST00000466624 NAT8BQ9UHF3 227 aa11.22□□□□□ -0.61
GPC1-207ENST00000466624 MUC21A0A0G2JKD1 596 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms