RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 RNF5Q99942 180 aa10.62□□□□□ -0.71
TGFBR3-204ENST00000465892 CRYGDP07320 174 aa10.61□□□□□ -0.71
TGFBR3-204ENST00000465892 NHLRC4P0CG21 123 aaPredicted RBP10.61□□□□□ -0.71
TGFBR3-204ENST00000465892 BEX4Q9NWD9 120 aaPredicted RBP10.61□□□□□ -0.71
TGFBR3-204ENST00000465892 SPTA1P02549 2419 aa10.61□□□□□ -0.71
TGFBR3-204ENST00000465892 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
TGFBR3-204ENST00000465892 LINC01619G3V211 115 aa10.61□□□□□ -0.71
TGFBR3-204ENST00000465892 RPL39P62891 51 aaKnown RBP10.61□□□□□ -0.71
TGFBR3-204ENST00000465892 SLC25A20O43772 301 aa10.61□□□□□ -0.71
TGFBR3-204ENST00000465892 DEFB124Q8NES8 71 aa10.61□□□□□ -0.71
TGFBR3-204ENST00000465892 ANKHD1Q8IWZ3 2542 aaKnown RBP10.6□□□□□ -0.71
TGFBR3-204ENST00000465892 CCDC179H3BU77 68 aa10.6□□□□□ -0.71
TGFBR3-204ENST00000465892 Q6ZS92 163 aa10.6□□□□□ -0.71
TGFBR3-204ENST00000465892 SLC50A1Q9BRV3 221 aa10.6□□□□□ -0.71
TGFBR3-204ENST00000465892 RIF1Q5UIP0 2472 aaKnown RBP10.6□□□□□ -0.71
TGFBR3-204ENST00000465892 IGKV3-7A0A075B6H7 116 aa10.6□□□□□ -0.71
TGFBR3-204ENST00000465892 NPBQ8NG41 125 aa10.6□□□□□ -0.71
TGFBR3-204ENST00000465892 PHLDA3Q9Y5J5 127 aa10.6□□□□□ -0.71
TGFBR3-204ENST00000465892 C10orf126Q8N4M7 172 aa10.59□□□□□ -0.71
TGFBR3-204ENST00000465892 FAM57AQ8TBR7 257 aa10.59□□□□□ -0.71
TGFBR3-204ENST00000465892 PLA2G2CQ5R387 149 aa10.59□□□□□ -0.71
TGFBR3-204ENST00000465892 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
TGFBR3-204ENST00000465892 CUBNO60494 3623 aa10.58□□□□□ -0.71
TGFBR3-204ENST00000465892 GNRH2O43555 120 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 TSHBP01222 138 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 IGHV3-30P01768 117 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 IGHV4-39P01824 125 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 ELANEP08246 267 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 IGHV3-30-5P0DP03 117 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 GAGE2BQ13066 116 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 GAGE2EQ4V326 116 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 GAGE2DQ9UEU5 116 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 CLPSL1A2RUU4 121 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 LYRM7Q5U5X0 104 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 NTN5Q8WTR8 489 aaPredicted RBP10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 C16orf92Q96LL3 132 aa10.58□□□□□ -0.72
TGFBR3-204ENST00000465892 IGLV4-69A0A075B6H9 119 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 RNF223E7ERA6 249 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 G3V318 75 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 SNCGO76070 127 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 IGHV7-81A0A0B4J1V7 117 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 A4D1N5 150 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 SHISA2Q6UWI4 295 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 JPT2Q9H910 190 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 HRNRQ86YZ3 2850 aaPredicted RBP10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 VPS13CQ709C8 3753 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 TRAV2A0A0B4J234 112 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 TEX49A0A1B0GTD5 131 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 Q1RN00 199 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 SMIM20Q8N5G0 67 aa10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 OPRPNQ99935 248 aaPredicted RBP10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 TLN1Q9Y490 2541 aaKnown RBP10.57□□□□□ -0.72
TGFBR3-204ENST00000465892 RBAKDNA6NC62 111 aa10.56□□□□□ -0.72
TGFBR3-204ENST00000465892 C3orf56Q8N813 242 aa10.56□□□□□ -0.72
TGFBR3-204ENST00000465892 CITED1Q99966 193 aa10.56□□□□□ -0.72
TGFBR3-204ENST00000465892 DPH3P1Q9H4G8 78 aa10.56□□□□□ -0.72
TGFBR3-204ENST00000465892 PTPRZ1P23471 2315 aaPredicted RBP10.56□□□□□ -0.72
TGFBR3-204ENST00000465892 F6UB75 175 aa10.56□□□□□ -0.72
TGFBR3-204ENST00000465892 SCGB2A1O75556 95 aa10.56□□□□□ -0.72
TGFBR3-204ENST00000465892 NDUFV3P56181 108 aaKnown RBP10.56□□□□□ -0.72
TGFBR3-204ENST00000465892 TTC32Q5I0X7 151 aa10.56□□□□□ -0.72
TGFBR3-204ENST00000465892 C20orf173Q96LM9 149 aa10.56□□□□□ -0.72
TGFBR3-204ENST00000465892 EIF4EBP3O60516 100 aaPredicted RBP10.55□□□□□ -0.72
TGFBR3-204ENST00000465892 ZNRF2Q8NHG8 242 aa10.55□□□□□ -0.72
TGFBR3-204ENST00000465892 LINC01560Q8TB33 94 aa10.55□□□□□ -0.72
TGFBR3-204ENST00000465892 LINC00527Q9UJ94 153 aa10.55□□□□□ -0.72
TGFBR3-204ENST00000465892 IGHV4-4A0A075B6R2 117 aa10.55□□□□□ -0.72
TGFBR3-204ENST00000465892 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
TGFBR3-204ENST00000465892 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 TMEM262E9PQX1 116 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 HERVK_113P61574 105 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 HERV-K104P63124 156 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 SLC25A29Q8N8R3 303 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 MUC4Q99102 2169 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 A0A087WWL8 130 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 TCF15Q12870 199 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 SBSPONQ8IVN8 264 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 Q8N1Y9 231 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 CCDC140Q96MF4 163 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 OTOGLQ3ZCN5 2332 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 F5H697 171 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 RHODO00212 210 aa10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
TGFBR3-204ENST00000465892 COL6A6A6NMZ7 2263 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 ADARB2-AS1A8MUL3 147 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 ATP6V0E1O15342 81 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 ZNF580Q9UK33 172 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 GAGE7O76087 117 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 GAGE4Q13068 117 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 C9orf47Q6ZRZ4 202 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 GPHB5Q86YW7 130 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 TIMD4Q96H15 378 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 METTL26Q96S19 204 aa10.53□□□□□ -0.72
TGFBR3-204ENST00000465892 VCX2Q9H322 139 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms