RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 ALX1Q15699 326 aa0.54□□□□□ -2.32
GARNL3-213ENST00000464616 DSCR8Q96T75 97 aa0.54□□□□□ -2.32
GARNL3-213ENST00000464616 DLEC1Q9Y238 1755 aa0.54□□□□□ -2.32
GARNL3-213ENST00000464616 DISP2A7MBM2 1401 aa0.54□□□□□ -2.32
GARNL3-213ENST00000464616 CDK12Q9NYV4 1490 aaPredicted RBP0.54□□□□□ -2.32
GARNL3-213ENST00000464616 TRBV20-1A0A075B6N2 111 aa0.53□□□□□ -2.32
GARNL3-213ENST00000464616 CXorf51AA0A1B0GTR3 108 aa0.53□□□□□ -2.32
GARNL3-213ENST00000464616 A0A1B0GW64 132 aa0.53□□□□□ -2.32
GARNL3-213ENST00000464616 RBAKDNA6NC62 111 aa0.53□□□□□ -2.32
GARNL3-213ENST00000464616 SNX29P2Q8IUI4 249 aa0.53□□□□□ -2.32
GARNL3-213ENST00000464616 TMEM141Q96I45 108 aa0.53□□□□□ -2.32
GARNL3-213ENST00000464616 ZCCHC6Q5VYS8 1495 aaKnown RBP0.53□□□□□ -2.33
GARNL3-213ENST00000464616 LOC285556D6RIA3 1793 aa0.52□□□□□ -2.33
GARNL3-213ENST00000464616 A0A096LNT2 108 aa0.52□□□□□ -2.33
GARNL3-213ENST00000464616 TRAV17A0A0B4J275 112 aa0.52□□□□□ -2.33
GARNL3-213ENST00000464616 CKS1BP61024 79 aa0.52□□□□□ -2.33
GARNL3-213ENST00000464616 IQCJQ1A5X6 159 aa0.52□□□□□ -2.33
GARNL3-213ENST00000464616 PAIP2BQ9ULR5 123 aaKnown RBP0.52□□□□□ -2.33
GARNL3-213ENST00000464616 ZNF670-ZNF695F2Z2N8 137 aa0.51□□□□□ -2.33
GARNL3-213ENST00000464616 M0R2Z0 102 aa0.51□□□□□ -2.33
GARNL3-213ENST00000464616 PLXNA2O75051 1894 aa0.51□□□□□ -2.33
GARNL3-213ENST00000464616 TSPAN19P0C672 248 aa0.51□□□□□ -2.33
GARNL3-213ENST00000464616 PYYP10082 97 aa0.51□□□□□ -2.33
GARNL3-213ENST00000464616 CLLU1Q5K131 121 aa0.51□□□□□ -2.33
GARNL3-213ENST00000464616 CTAGE3PQ8IX95 158 aa0.51□□□□□ -2.33
GARNL3-213ENST00000464616 MAFIPQ8WZ33 124 aa0.51□□□□□ -2.33
GARNL3-213ENST00000464616 RREB1Q92766 1687 aa0.51□□□□□ -2.33
GARNL3-213ENST00000464616 COPZ2Q9P299 210 aa0.51□□□□□ -2.33
GARNL3-213ENST00000464616 CDK5RAP2Q96SN8 1893 aa0.5□□□□□ -2.33
GARNL3-213ENST00000464616 LRP5O75197 1615 aa0.5□□□□□ -2.33
GARNL3-213ENST00000464616 SSBP1Q04837 148 aaKnown RBP0.5□□□□□ -2.33
GARNL3-213ENST00000464616 FAM74A4Q5TZK3 123 aa0.5□□□□□ -2.33
GARNL3-213ENST00000464616 SCIMPQ6UWF3 145 aa0.5□□□□□ -2.33
GARNL3-213ENST00000464616 TSKUQ8WUA8 353 aa0.5□□□□□ -2.33
GARNL3-213ENST00000464616 ZNF142P52746 1687 aaPredicted RBP0.49□□□□□ -2.33
GARNL3-213ENST00000464616 ARHGEF10O15013 1369 aa0.49□□□□□ -2.33
GARNL3-213ENST00000464616 TCRBV3S1A0A5B6 114 aa0.49□□□□□ -2.33
GARNL3-213ENST00000464616 IGLC6P0CF74 106 aa0.49□□□□□ -2.33
GARNL3-213ENST00000464616 MPC1LP0DKB6 136 aa0.49□□□□□ -2.33
GARNL3-213ENST00000464616 SLC25A6P12236 298 aa0.49□□□□□ -2.33
GARNL3-213ENST00000464616 SMCO1Q147U7 214 aa0.49□□□□□ -2.33
GARNL3-213ENST00000464616 CYP2G1PQ6ZSU1 146 aa0.49□□□□□ -2.33
GARNL3-213ENST00000464616 TCEAL4Q96EI5 215 aa0.49□□□□□ -2.33
GARNL3-213ENST00000464616 FAM103A1Q9BTL3 118 aaKnown RBP0.49□□□□□ -2.33
GARNL3-213ENST00000464616 CPDO75976 1380 aa0.48□□□□□ -2.33
GARNL3-213ENST00000464616 RBBP6Q7Z6E9 1792 aaKnown RBP0.48□□□□□ -2.33
GARNL3-213ENST00000464616 A6NIN4 97 aa0.48□□□□□ -2.33
GARNL3-213ENST00000464616 F2Z2F3 143 aa0.48□□□□□ -2.33
GARNL3-213ENST00000464616 LY6G6CO95867 125 aa0.48□□□□□ -2.33
GARNL3-213ENST00000464616 HIST1H1AQ02539 215 aaPredicted RBP0.48□□□□□ -2.33
GARNL3-213ENST00000464616 SPANXN1Q5VSR9 72 aa0.48□□□□□ -2.33
GARNL3-213ENST00000464616 OR2T2Q6IF00 324 aa0.48□□□□□ -2.33
GARNL3-213ENST00000464616 VSTM2AQ8TAG5 236 aa0.48□□□□□ -2.33
GARNL3-213ENST00000464616 MYH13Q9UKX3 1938 aa0.48□□□□□ -2.33
GARNL3-213ENST00000464616 MAP2P11137 1827 aaKnown RBP0.48□□□□□ -2.33
GARNL3-213ENST00000464616 ZNF469Q96JG9 3925 aaPredicted RBP0.47□□□□□ -2.33
GARNL3-213ENST00000464616 GUCA1AP43080 201 aaPredicted RBP0.47□□□□□ -2.33
GARNL3-213ENST00000464616 SPCS2Q15005 226 aa0.47□□□□□ -2.33
GARNL3-213ENST00000464616 SPINK6Q6UWN8 80 aa0.47□□□□□ -2.33
GARNL3-213ENST00000464616 PFDN5Q99471 154 aa0.47□□□□□ -2.33
GARNL3-213ENST00000464616 PSMG3Q9BT73 122 aaPredicted RBP0.47□□□□□ -2.33
GARNL3-213ENST00000464616 PRR15LQ9BU68 103 aa0.47□□□□□ -2.33
GARNL3-213ENST00000464616 SCP2D1Q9UJQ7 156 aa0.47□□□□□ -2.33
GARNL3-213ENST00000464616 LSM2Q9Y333 95 aaKnown RBP0.47□□□□□ -2.33
GARNL3-213ENST00000464616 KIF13AQ9H1H9 1805 aa0.47□□□□□ -2.33
GARNL3-213ENST00000464616 CASZ1Q86V15 1759 aa0.47□□□□□ -2.33
GARNL3-213ENST00000464616 CEP152O94986 1710 aa0.47□□□□□ -2.33
GARNL3-213ENST00000464616 FHAD1B1AJZ9 1412 aa0.47□□□□□ -2.33
GARNL3-213ENST00000464616 ARPC5O15511 151 aa0.46□□□□□ -2.34
GARNL3-213ENST00000464616 IFNA17P01571 189 aa0.46□□□□□ -2.34
GARNL3-213ENST00000464616 PIPP12273 146 aaPredicted RBP0.46□□□□□ -2.34
GARNL3-213ENST00000464616 COX4I1P13073 169 aa0.46□□□□□ -2.34
GARNL3-213ENST00000464616 RRAS2P62070 204 aaPredicted RBP0.46□□□□□ -2.34
GARNL3-213ENST00000464616 LINC01545Q5VT33 79 aa0.46□□□□□ -2.34
GARNL3-213ENST00000464616 SMR3AQ99954 134 aa0.46□□□□□ -2.34
GARNL3-213ENST00000464616 SMIM3Q9BZL3 60 aa0.46□□□□□ -2.34
GARNL3-213ENST00000464616 BPESC1Q9GZL8 116 aa0.46□□□□□ -2.34
GARNL3-213ENST00000464616 K7ERU9 68 aa0.45□□□□□ -2.34
GARNL3-213ENST00000464616 PRH1P02810 166 aa0.45□□□□□ -2.34
GARNL3-213ENST00000464616 ELOF1P60002 83 aaKnown RBP0.45□□□□□ -2.34
GARNL3-213ENST00000464616 EMX2Q04743 252 aa0.45□□□□□ -2.34
GARNL3-213ENST00000464616 SMIM21Q3B7S5 101 aa0.45□□□□□ -2.34
GARNL3-213ENST00000464616 RPL7L1Q6DKI1 246 aaKnown RBP0.45□□□□□ -2.34
GARNL3-213ENST00000464616 VMO1Q7Z5L0 202 aa0.45□□□□□ -2.34
GARNL3-213ENST00000464616 IFI27L1Q96BM0 104 aa0.45□□□□□ -2.34
GARNL3-213ENST00000464616 SPAG17Q6Q759 2223 aa0.45□□□□□ -2.34
GARNL3-213ENST00000464616 TANC1Q9C0D5 1861 aa0.44□□□□□ -2.34
GARNL3-213ENST00000464616 PIGBOS1A0A0B4J2F0 54 aa0.44□□□□□ -2.34
GARNL3-213ENST00000464616 SLC48A1Q6P1K1 146 aa0.44□□□□□ -2.34
GARNL3-213ENST00000464616 RPRMQ9NS64 109 aa0.44□□□□□ -2.34
GARNL3-213ENST00000464616 V9GYV3 84 aa0.44□□□□□ -2.34
GARNL3-213ENST00000464616 KDM6BO15054 1643 aa0.44□□□□□ -2.34
GARNL3-213ENST00000464616 DAPK1P53355 1430 aa0.44□□□□□ -2.34
GARNL3-213ENST00000464616 TMEM2Q9UHN6 1383 aa0.44□□□□□ -2.34
GARNL3-213ENST00000464616 CDK13Q14004 1512 aaKnown RBP0.43□□□□□ -2.34
GARNL3-213ENST00000464616 ESPL1Q14674 2120 aa0.43□□□□□ -2.34
GARNL3-213ENST00000464616 LOC105371267A0A1B0GV96 52 aa0.43□□□□□ -2.34
GARNL3-213ENST00000464616 LINC00694P0DN24 101 aa0.43□□□□□ -2.34
GARNL3-213ENST00000464616 COPZ1P61923 177 aa0.43□□□□□ -2.34
GARNL3-213ENST00000464616 C4orf33Q8N1A6 199 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms