RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 IGHV4-30-4P0DP06 118 aa11.05□□□□□ -0.64
TMEM39A-203ENST00000461654 CAMPP49913 170 aa11.05□□□□□ -0.64
TMEM39A-203ENST00000461654 HBBP68871 147 aa11.05□□□□□ -0.64
TMEM39A-203ENST00000461654 RBMY1FQ15415 496 aaKnown RBP11.05□□□□□ -0.64
TMEM39A-203ENST00000461654 SPANXN1Q5VSR9 72 aa11.05□□□□□ -0.64
TMEM39A-203ENST00000461654 PHLDA3Q9Y5J5 127 aa11.05□□□□□ -0.64
TMEM39A-203ENST00000461654 IGHV3-16A0A0C4DH30 117 aa11.04□□□□□ -0.64
TMEM39A-203ENST00000461654 UBE2CO00762 179 aa11.04□□□□□ -0.64
TMEM39A-203ENST00000461654 SNAI2O43623 268 aa11.04□□□□□ -0.64
TMEM39A-203ENST00000461654 MT-ND6P03923 174 aa11.04□□□□□ -0.64
TMEM39A-203ENST00000461654 ZNF415Q09FC8 603 aa11.04□□□□□ -0.64
TMEM39A-203ENST00000461654 TWIST1Q15672 202 aa11.04□□□□□ -0.64
TMEM39A-203ENST00000461654 SMIM15Q7Z3B0 74 aa11.04□□□□□ -0.64
TMEM39A-203ENST00000461654 C1orf158Q8N1D5 194 aa11.04□□□□□ -0.64
TMEM39A-203ENST00000461654 SSBP4Q9BWG4 385 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-203ENST00000461654 GIG44P09565 113 aaPredicted RBP11.03□□□□□ -0.64
TMEM39A-203ENST00000461654 SSTP61278 116 aa11.03□□□□□ -0.64
TMEM39A-203ENST00000461654 SYT8Q8NBV8 401 aa11.03□□□□□ -0.64
TMEM39A-203ENST00000461654 RCHY1Q96PM5 261 aa11.03□□□□□ -0.64
TMEM39A-203ENST00000461654 TM2D3Q9BRN9 247 aa11.03□□□□□ -0.64
TMEM39A-203ENST00000461654 GNB1LQ9BYB4 327 aa11.03□□□□□ -0.64
TMEM39A-203ENST00000461654 ZMAT4Q9H898 229 aa11.03□□□□□ -0.64
TMEM39A-203ENST00000461654 TP53TG3Q9ULZ0 132 aa11.03□□□□□ -0.64
TMEM39A-203ENST00000461654 AGRNO00468 2067 aa11.03□□□□□ -0.64
TMEM39A-203ENST00000461654 MUC21A0A0G2JKD1 596 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 MUC21A0A140T8X8 626 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 A0A1B0GXF2 115 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 SNURFLB1AK76 121 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 C3orf84H3BNL1 204 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 HLA-DQA1P01909 254 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 ZNF575Q86XF7 245 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 ZFP82Q8N141 532 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 FRZBQ92765 325 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 CNFNQ9BYD5 112 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 TRAPPC1Q9Y5R8 145 aa11.02□□□□□ -0.65
TMEM39A-203ENST00000461654 C1orf196B1AJZ1 125 aa11.01□□□□□ -0.65
TMEM39A-203ENST00000461654 RNASE3P12724 160 aaKnown RBP11.01□□□□□ -0.65
TMEM39A-203ENST00000461654 NTF3P20783 257 aa11.01□□□□□ -0.65
TMEM39A-203ENST00000461654 CSNK1G2-AS1Q8NCQ2 148 aa11.01□□□□□ -0.65
TMEM39A-203ENST00000461654 OR10AG1Q8NH19 301 aa11.01□□□□□ -0.65
TMEM39A-203ENST00000461654 SCRT2Q9NQ03 307 aa11.01□□□□□ -0.65
TMEM39A-203ENST00000461654 MDFICQ9P1T7 246 aa11.01□□□□□ -0.65
TMEM39A-203ENST00000461654 IGHV4-4A0A075B6R2 117 aa11□□□□□ -0.65
TMEM39A-203ENST00000461654 M0R381 172 aa11□□□□□ -0.65
TMEM39A-203ENST00000461654 TRGC1P0CF51 173 aa11□□□□□ -0.65
TMEM39A-203ENST00000461654 RRN3P1Q2M238 152 aa11□□□□□ -0.65
TMEM39A-203ENST00000461654 ZNF705AQ6ZN79 300 aaPredicted RBP11□□□□□ -0.65
TMEM39A-203ENST00000461654 ZNF493Q6ZR52 646 aa11□□□□□ -0.65
TMEM39A-203ENST00000461654 C9orf85Q96MD7 179 aa11□□□□□ -0.65
TMEM39A-203ENST00000461654 SPXQ9BT56 116 aa11□□□□□ -0.65
TMEM39A-203ENST00000461654 TENM3Q9P273 2699 aa10.99□□□□□ -0.65
TMEM39A-203ENST00000461654 TMEM136Q6ZRR5 245 aa10.99□□□□□ -0.65
TMEM39A-203ENST00000461654 TMEM263Q8WUH6 116 aaKnown RBP10.99□□□□□ -0.65
TMEM39A-203ENST00000461654 C16orf74Q96GX8 76 aa10.99□□□□□ -0.65
TMEM39A-203ENST00000461654 MRPL18Q9H0U6 180 aaKnown RBP10.99□□□□□ -0.65
TMEM39A-203ENST00000461654 SMIM9A6NGZ8 99 aa10.98□□□□□ -0.65
TMEM39A-203ENST00000461654 APCSP02743 223 aa10.98□□□□□ -0.65
TMEM39A-203ENST00000461654 TRGC2P03986 189 aa10.98□□□□□ -0.65
TMEM39A-203ENST00000461654 RAB5BP61020 215 aa10.98□□□□□ -0.65
TMEM39A-203ENST00000461654 FABP9Q0Z7S8 132 aa10.98□□□□□ -0.65
TMEM39A-203ENST00000461654 Q6ZWC4 215 aa10.98□□□□□ -0.65
TMEM39A-203ENST00000461654 GSN-AS1Q9NRJ2 163 aa10.98□□□□□ -0.65
TMEM39A-203ENST00000461654 GATD1Q8NB37 220 aa10.97□□□□□ -0.65
TMEM39A-203ENST00000461654 MUC7Q8TAX7 377 aa10.97□□□□□ -0.65
TMEM39A-203ENST00000461654 AP1S3Q96PC3 154 aa10.97□□□□□ -0.65
TMEM39A-203ENST00000461654 TMEM191AQ9H0A3 160 aa10.97□□□□□ -0.65
TMEM39A-203ENST00000461654 KMT2CQ8NEZ4 4911 aaKnown RBP10.97□□□□□ -0.65
TMEM39A-203ENST00000461654 M0R2P5 195 aa10.96□□□□□ -0.65
TMEM39A-203ENST00000461654 NXPH4O95158 308 aa10.96□□□□□ -0.65
TMEM39A-203ENST00000461654 SMIM17P0DL12 118 aa10.96□□□□□ -0.65
TMEM39A-203ENST00000461654 AZU1P20160 251 aa10.96□□□□□ -0.65
TMEM39A-203ENST00000461654 DEFB135Q30KP9 77 aa10.96□□□□□ -0.65
TMEM39A-203ENST00000461654 ZNF876PQ49A33 203 aa10.96□□□□□ -0.65
TMEM39A-203ENST00000461654 SPATA25Q9BR10 227 aa10.96□□□□□ -0.65
TMEM39A-203ENST00000461654 MSRB1Q9NZV6 116 aa10.96□□□□□ -0.65
TMEM39A-203ENST00000461654 HUWE1Q7Z6Z7 4374 aaKnown RBP10.96□□□□□ -0.66
TMEM39A-203ENST00000461654 PRM2P04554 102 aa10.95□□□□□ -0.66
TMEM39A-203ENST00000461654 C11orf72Q8NBR9 251 aa10.95□□□□□ -0.66
TMEM39A-203ENST00000461654 RNASE8Q8TDE3 154 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-203ENST00000461654 PTH2Q96A98 100 aa10.95□□□□□ -0.66
TMEM39A-203ENST00000461654 EDA2RQ9HAV5 297 aa10.95□□□□□ -0.66
TMEM39A-203ENST00000461654 SPRY2O43597 315 aa10.94□□□□□ -0.66
TMEM39A-203ENST00000461654 PIK3CD-AS1Q5SR53 167 aa10.94□□□□□ -0.66
TMEM39A-203ENST00000461654 DMRTA1Q5VZB9 504 aa10.94□□□□□ -0.66
TMEM39A-203ENST00000461654 RNF183Q96D59 192 aa10.94□□□□□ -0.66
TMEM39A-203ENST00000461654 NDUFAF3Q9BU61 184 aa10.94□□□□□ -0.66
TMEM39A-203ENST00000461654 TMA7Q9Y2S6 64 aaKnown RBP10.94□□□□□ -0.66
TMEM39A-203ENST00000461654 STAB2Q8WWQ8 2551 aa10.94□□□□□ -0.66
TMEM39A-203ENST00000461654 EVI2AP22794 236 aa10.93□□□□□ -0.66
TMEM39A-203ENST00000461654 SLAQ13239 276 aa10.93□□□□□ -0.66
TMEM39A-203ENST00000461654 CASC10Q5T4H9 136 aa10.93□□□□□ -0.66
TMEM39A-203ENST00000461654 FAM104BQ5XKR9 115 aa10.93□□□□□ -0.66
TMEM39A-203ENST00000461654 OR11H2Q8NH07 326 aa10.93□□□□□ -0.66
TMEM39A-203ENST00000461654 DPH3P1Q9H4G8 78 aa10.93□□□□□ -0.66
TMEM39A-203ENST00000461654 TP53TG1Q9Y2A0 90 aa10.93□□□□□ -0.66
TMEM39A-203ENST00000461654 A8MWV9 139 aa10.92□□□□□ -0.66
TMEM39A-203ENST00000461654 DAZ2Q13117 558 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-203ENST00000461654 AMN1Q8IY45 258 aa10.92□□□□□ -0.66
TMEM39A-203ENST00000461654 C14orf178Q8N769 122 aaPredicted RBP10.92□□□□□ -0.66
TMEM39A-203ENST00000461654 X6R8D5 127 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms