RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 GATA1P15976 413 aaPredicted RBP15.78■□□□□ 0.12
PTPN4-208ENST00000460289 ASIPP42127 132 aa15.78■□□□□ 0.12
PTPN4-208ENST00000460289 AKR1C3P42330 323 aa15.78■□□□□ 0.12
PTPN4-208ENST00000460289 CRIP1P50238 77 aa15.78■□□□□ 0.12
PTPN4-208ENST00000460289 FAM162BQ5T6X4 162 aa15.78■□□□□ 0.12
PTPN4-208ENST00000460289 CFAP126Q5VTH2 177 aa15.78■□□□□ 0.12
PTPN4-208ENST00000460289 SH2D6Q7Z4S9 175 aa15.78■□□□□ 0.12
PTPN4-208ENST00000460289 KRTAP1-5Q9BYS1 174 aa15.78■□□□□ 0.12
PTPN4-208ENST00000460289 PGPEP1LA6NFU8 196 aa15.77■□□□□ 0.12
PTPN4-208ENST00000460289 B4DEV8 164 aa15.77■□□□□ 0.12
PTPN4-208ENST00000460289 RAB5CP51148 216 aa15.77■□□□□ 0.12
PTPN4-208ENST00000460289 ZNF506Q5JVG8 444 aa15.77■□□□□ 0.12
PTPN4-208ENST00000460289 PIK3CD-AS1Q5SR53 167 aa15.77■□□□□ 0.12
PTPN4-208ENST00000460289 Q6ZNX1 250 aa15.77■□□□□ 0.12
PTPN4-208ENST00000460289 TNP2Q05952 138 aa15.76■□□□□ 0.11
PTPN4-208ENST00000460289 IL36BQ9NZH7 164 aa15.76■□□□□ 0.11
PTPN4-208ENST00000460289 KRBOX1C9JBD0 128 aa15.75■□□□□ 0.11
PTPN4-208ENST00000460289 SH2D1AO60880 128 aa15.75■□□□□ 0.11
PTPN4-208ENST00000460289 ZNF674Q2M3X9 581 aa15.75■□□□□ 0.11
PTPN4-208ENST00000460289 SLC25A29Q8N8R3 303 aa15.75■□□□□ 0.11
PTPN4-208ENST00000460289 PRADC1Q9BSG0 188 aa15.75■□□□□ 0.11
PTPN4-208ENST00000460289 TRBV6-4A0A1B0GX49 114 aa15.74■□□□□ 0.11
PTPN4-208ENST00000460289 DNLZQ5SXM8 178 aa15.74■□□□□ 0.11
PTPN4-208ENST00000460289 PKD1P98161 4303 aa15.74■□□□□ 0.11
PTPN4-208ENST00000460289 A8MWV9 139 aa15.73■□□□□ 0.11
PTPN4-208ENST00000460289 TEX46H3BTG2 121 aa15.73■□□□□ 0.11
PTPN4-208ENST00000460289 M0R036 132 aa15.73■□□□□ 0.11
PTPN4-208ENST00000460289 C1QBP02746 253 aa15.73■□□□□ 0.11
PTPN4-208ENST00000460289 RHOHQ15669 191 aa15.73■□□□□ 0.11
PTPN4-208ENST00000460289 NHLRC2Q8NBF2 726 aa15.73■□□□□ 0.11
PTPN4-208ENST00000460289 TRAV9-2A0A087WT02 112 aa15.72■□□□□ 0.11
PTPN4-208ENST00000460289 IGHV3-73A0A0B4J1V6 119 aa15.72■□□□□ 0.11
PTPN4-208ENST00000460289 TRAV1-1A0A0B4J248 108 aa15.72■□□□□ 0.11
PTPN4-208ENST00000460289 MGST1P10620 155 aaKnown RBP15.72■□□□□ 0.11
PTPN4-208ENST00000460289 LOC100131303A0A0U1RQF7 123 aa15.71■□□□□ 0.11
PTPN4-208ENST00000460289 SCO2A0A1W2PP80 73 aa15.71■□□□□ 0.11
PTPN4-208ENST00000460289 LINC01559Q495D7 138 aa15.71■□□□□ 0.11
PTPN4-208ENST00000460289 ZFP2Q6ZN57 461 aa15.71■□□□□ 0.11
PTPN4-208ENST00000460289 SYT8Q8NBV8 401 aa15.71■□□□□ 0.11
PTPN4-208ENST00000460289 MANBALQ9NQG1 85 aa15.71■□□□□ 0.11
PTPN4-208ENST00000460289 LY96Q9Y6Y9 160 aa15.71■□□□□ 0.11
PTPN4-208ENST00000460289 H3BVH4 76 aa15.7■□□□□ 0.1
PTPN4-208ENST00000460289 K7EP13 123 aa15.7■□□□□ 0.1
PTPN4-208ENST00000460289 ARMS2P0C7Q2 107 aa15.7■□□□□ 0.1
PTPN4-208ENST00000460289 TIRAPP58753 221 aa15.7■□□□□ 0.1
PTPN4-208ENST00000460289 SLC51BQ86UW2 128 aa15.7■□□□□ 0.1
PTPN4-208ENST00000460289 GRIFINA4D1Z8 144 aa15.69■□□□□ 0.1
PTPN4-208ENST00000460289 SULT1A2P50226 295 aa15.69■□□□□ 0.1
PTPN4-208ENST00000460289 CCL20P78556 96 aa15.69■□□□□ 0.1
PTPN4-208ENST00000460289 BAGE2Q86Y30 109 aa15.69■□□□□ 0.1
PTPN4-208ENST00000460289 PARLQ9H300 379 aa15.69■□□□□ 0.1
PTPN4-208ENST00000460289 GNG13Q9P2W3 67 aa15.69■□□□□ 0.1
PTPN4-208ENST00000460289 LINC00315P59091 139 aa15.68■□□□□ 0.1
PTPN4-208ENST00000460289 AKAP14Q86UN6 197 aa15.68■□□□□ 0.1
PTPN4-208ENST00000460289 PHLDA3Q9Y5J5 127 aa15.68■□□□□ 0.1
PTPN4-208ENST00000460289 PKHD1P08F94 4074 aa15.68■□□□□ 0.1
PTPN4-208ENST00000460289 TMSB15BA0A087X1C1 80 aa15.67■□□□□ 0.1
PTPN4-208ENST00000460289 MED14OSP0DP75 135 aa15.67■□□□□ 0.1
PTPN4-208ENST00000460289 EVI2AP22794 236 aa15.67■□□□□ 0.1
PTPN4-208ENST00000460289 DMRTA1Q5VZB9 504 aa15.67■□□□□ 0.1
PTPN4-208ENST00000460289 WFDC10BQ8IUB3 73 aa15.67■□□□□ 0.1
PTPN4-208ENST00000460289 MLST8Q9BVC4 326 aa15.67■□□□□ 0.1
PTPN4-208ENST00000460289 BOLA1Q9Y3E2 137 aa15.67■□□□□ 0.1
PTPN4-208ENST00000460289 ZNF575Q86XF7 245 aa15.66■□□□□ 0.1
PTPN4-208ENST00000460289 SCRT2Q9NQ03 307 aa15.66■□□□□ 0.1
PTPN4-208ENST00000460289 DNAH10OSP0CZ25 163 aa15.65■□□□□ 0.1
PTPN4-208ENST00000460289 NFE4Q86UQ8 179 aa15.65■□□□□ 0.1
PTPN4-208ENST00000460289 DNAH11Q96DT5 4516 aa15.64■□□□□ 0.09
PTPN4-208ENST00000460289 KIAA1109Q2LD37 5005 aa15.64■□□□□ 0.09
PTPN4-208ENST00000460289 RHODO00212 210 aa15.64■□□□□ 0.09
PTPN4-208ENST00000460289 RPL35P42766 123 aaKnown RBP15.64■□□□□ 0.09
PTPN4-208ENST00000460289 JPT2Q9H910 190 aa15.64■□□□□ 0.09
PTPN4-208ENST00000460289 hCG_2014768A0A024R1R8 64 aa15.63■□□□□ 0.09
PTPN4-208ENST00000460289 TRAV8-6A0A0B4J262 113 aa15.63■□□□□ 0.09
PTPN4-208ENST00000460289 IFNA1P01562 189 aa15.63■□□□□ 0.09
PTPN4-208ENST00000460289 UFSP1Q6NVU6 142 aa15.63■□□□□ 0.09
PTPN4-208ENST00000460289 Q6ZSN1 163 aa15.63■□□□□ 0.09
PTPN4-208ENST00000460289 ZFP82Q8N141 532 aa15.63■□□□□ 0.09
PTPN4-208ENST00000460289 ATP6V0E2Q8NHE4 81 aa15.63■□□□□ 0.09
PTPN4-208ENST00000460289 C11orf52Q96A22 123 aa15.63■□□□□ 0.09
PTPN4-208ENST00000460289 SFRP2Q96HF1 295 aa15.63■□□□□ 0.09
PTPN4-208ENST00000460289 SAMD10Q9BYL1 202 aa15.63■□□□□ 0.09
PTPN4-208ENST00000460289 CXCL1P09341 107 aa15.62■□□□□ 0.09
PTPN4-208ENST00000460289 C10orf126Q8N4M7 172 aa15.62■□□□□ 0.09
PTPN4-208ENST00000460289 GTSF1LQ9H1H1 148 aa15.62■□□□□ 0.09
PTPN4-208ENST00000460289 DYNC1H1Q14204 4646 aaKnown RBP15.62■□□□□ 0.09
PTPN4-208ENST00000460289 HERC2O95714 4834 aa15.62■□□□□ 0.09
PTPN4-208ENST00000460289 IGHV3-38A0A0C4DH36 116 aa15.61■□□□□ 0.09
PTPN4-208ENST00000460289 M0R381 172 aa15.61■□□□□ 0.09
PTPN4-208ENST00000460289 OR10J3Q5JRS4 329 aa15.61■□□□□ 0.09
PTPN4-208ENST00000460289 PRR27Q6MZM9 219 aa15.61■□□□□ 0.09
PTPN4-208ENST00000460289 Q6ZRN7 208 aaPredicted RBP15.61■□□□□ 0.09
PTPN4-208ENST00000460289 C16orf90A8MZG2 172 aa15.6■□□□□ 0.09
PTPN4-208ENST00000460289 PDE6DO43924 150 aa15.6■□□□□ 0.09
PTPN4-208ENST00000460289 CRYGDP07320 174 aa15.6■□□□□ 0.09
PTPN4-208ENST00000460289 MEF2BQ02080 365 aaPredicted RBP15.6■□□□□ 0.09
PTPN4-208ENST00000460289 LELP1Q5T871 98 aa15.6■□□□□ 0.09
PTPN4-208ENST00000460289 FAM74A4Q5TZK3 123 aa15.6■□□□□ 0.09
PTPN4-208ENST00000460289 C9orf62Q8N4C0 152 aa15.6■□□□□ 0.09
PTPN4-208ENST00000460289 MSRB1Q9NZV6 116 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms