RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 KRTAP10-9P60411 292 aa13.87□□□□□ -0.19
SEMA3B-209ENST00000456560 TMEM95Q3KNT9 176 aa13.87□□□□□ -0.19
SEMA3B-209ENST00000456560 TRAV26-2A0A0B4J265 109 aa13.86□□□□□ -0.19
SEMA3B-209ENST00000456560 F6UB75 175 aa13.86□□□□□ -0.19
SEMA3B-209ENST00000456560 PSMB8P28062 276 aa13.86□□□□□ -0.19
SEMA3B-209ENST00000456560 SPCS1Q9Y6A9 102 aa13.86□□□□□ -0.19
SEMA3B-209ENST00000456560 TMEM158Q8WZ71 300 aa13.86□□□□□ -0.19
SEMA3B-209ENST00000456560 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.85□□□□□ -0.199e-13■■■□□ 14.7
SEMA3B-209ENST00000456560 FASNP49327 2511 aaKnown RBP13.85□□□□□ -0.19
SEMA3B-209ENST00000456560 G3V4G9 280 aa13.85□□□□□ -0.19
SEMA3B-209ENST00000456560 EDN2P20800 178 aa13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 ANXA2RQ3ZCQ2 193 aa13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 OR5A1Q8NGJ0 315 aa13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 MRAP2Q96G30 205 aa13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 ZMAT4Q9H898 229 aa13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 IGKV3-7A0A075B6H7 116 aa13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 J3QLI3 93 aa13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 SMIM13P0DJ93 91 aa13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 MED14OSP0DP75 135 aa13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 GCSHP23434 173 aa13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 RNASE4P34096 147 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-209ENST00000456560 TMEM89A2RUT3 159 aa13.83□□□□□ -0.2
SEMA3B-209ENST00000456560 PRSS1P07477 247 aa13.83□□□□□ -0.2
SEMA3B-209ENST00000456560 FABP2P12104 132 aa13.83□□□□□ -0.2
SEMA3B-209ENST00000456560 ASIPP42127 132 aa13.83□□□□□ -0.2
SEMA3B-209ENST00000456560 ODF1Q14990 250 aa13.83□□□□□ -0.2
SEMA3B-209ENST00000456560 CELSR1Q9NYQ6 3014 aa13.83□□□□□ -0.2
SEMA3B-209ENST00000456560 IGKV2D-26A0A0A0MRZ7 120 aa13.83□□□□□ -0.2
SEMA3B-209ENST00000456560 LAGE3Q14657 143 aa13.82□□□□□ -0.2
SEMA3B-209ENST00000456560 SAMD5Q5TGI4 173 aa13.82□□□□□ -0.2
SEMA3B-209ENST00000456560 NEGR1Q7Z3B1 354 aa13.82□□□□□ -0.2
SEMA3B-209ENST00000456560 SRD5A1P18405 259 aa13.82□□□□□ -0.2
SEMA3B-209ENST00000456560 PSMG4Q5JS54 123 aa13.82□□□□□ -0.2
SEMA3B-209ENST00000456560 C10orf99Q6UWK7 81 aa13.82□□□□□ -0.2
SEMA3B-209ENST00000456560 DCANP1Q8TF63 244 aa13.82□□□□□ -0.2
SEMA3B-209ENST00000456560 TTTY13Q9BZ97 58 aa13.82□□□□□ -0.2
SEMA3B-209ENST00000456560 SPRY2O43597 315 aa13.81□□□□□ -0.2
SEMA3B-209ENST00000456560 SMIM17P0DL12 118 aa13.81□□□□□ -0.2
SEMA3B-209ENST00000456560 HHLA3Q9XRX5 114 aa13.81□□□□□ -0.2
SEMA3B-209ENST00000456560 M0R381 172 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 GNRH2O43555 120 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 IGKCP01834 107 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 S100A4P26447 101 aaKnown RBP13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 FXYD2P54710 66 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 FOXC2Q99958 501 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 HIGD1BQ9P298 99 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 KLLNB2CW77 178 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 ID1P41134 155 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 SAMD13Q5VXD3 122 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 CHAC1Q9BUX1 264 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 APCP25054 2843 aa13.8□□□□□ -0.2
SEMA3B-209ENST00000456560 ATP5LO75964 103 aa13.79□□□□□ -0.2
SEMA3B-209ENST00000456560 TGFAP01135 160 aa13.79□□□□□ -0.2
SEMA3B-209ENST00000456560 RNASE3P12724 160 aaKnown RBP13.79□□□□□ -0.2
SEMA3B-209ENST00000456560 DPH3P1Q9H4G8 78 aa13.79□□□□□ -0.2
SEMA3B-209ENST00000456560 PHLDA3Q9Y5J5 127 aa13.79□□□□□ -0.2
SEMA3B-209ENST00000456560 ANKRD17O75179 2603 aaKnown RBP13.79□□□□□ -0.2
SEMA3B-209ENST00000456560 GTSCR1Q86UQ5 136 aa13.79□□□□□ -0.2
SEMA3B-209ENST00000456560 RASL10AQ92737 203 aa13.79□□□□□ -0.2
SEMA3B-209ENST00000456560 SMIM2Q9BVW6 85 aa13.79□□□□□ -0.2
SEMA3B-209ENST00000456560 CSPG4Q6UVK1 2322 aa13.78□□□□□ -0.2
SEMA3B-209ENST00000456560 FSHBP01225 129 aa13.78□□□□□ -0.2
SEMA3B-209ENST00000456560 MAPK1IP1LQ8NDC0 245 aa13.78□□□□□ -0.2
SEMA3B-209ENST00000456560 DPM2O94777 84 aa13.77□□□□□ -0.21
SEMA3B-209ENST00000456560 NXPH4O95158 308 aa13.77□□□□□ -0.21
SEMA3B-209ENST00000456560 C14orf178Q8N769 122 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-209ENST00000456560 K7ERJ3 54 aa13.76□□□□□ -0.21
SEMA3B-209ENST00000456560 ZC2HC1BQ5TFG8 222 aa13.76□□□□□ -0.21
SEMA3B-209ENST00000456560 MYOZ3Q8TDC0 251 aa13.76□□□□□ -0.21
SEMA3B-209ENST00000456560 C20orf78Q9BR46 151 aa13.76□□□□□ -0.21
SEMA3B-209ENST00000456560 TRBV25-1A0A075B6N4 114 aa13.76□□□□□ -0.21
SEMA3B-209ENST00000456560 POM121L12Q8N7R1 296 aa13.76□□□□□ -0.21
SEMA3B-209ENST00000456560 NAV2Q8IVL1 2488 aa13.76□□□□□ -0.21
SEMA3B-209ENST00000456560 HECTD1Q9ULT8 2610 aa13.76□□□□□ -0.21
SEMA3B-209ENST00000456560 TMEM238C9JI98 176 aa13.75□□□□□ -0.21
SEMA3B-209ENST00000456560 TMEM160Q9NX00 188 aa13.75□□□□□ -0.21
SEMA3B-209ENST00000456560 VPREB3Q9UKI3 123 aa13.75□□□□□ -0.21
SEMA3B-209ENST00000456560 RNF223E7ERA6 249 aa13.75□□□□□ -0.21
SEMA3B-209ENST00000456560 SUMO2P61956 95 aaKnown RBP13.75□□□□□ -0.21
SEMA3B-209ENST00000456560 Q6YL49 198 aa13.75□□□□□ -0.21
SEMA3B-209ENST00000456560 RPL24P83731 157 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-209ENST00000456560 RPL39LQ96EH5 51 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-209ENST00000456560 NHP2Q9NX24 153 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-209ENST00000456560 KIF25-AS1Q9Y6Z4 181 aa13.74□□□□□ -0.21
SEMA3B-209ENST00000456560 IGHV4-31P0DP07 118 aa13.74□□□□□ -0.21
SEMA3B-209ENST00000456560 CEND1Q8N111 149 aa13.74□□□□□ -0.21
SEMA3B-209ENST00000456560 LINC00315P59091 139 aa13.73□□□□□ -0.21
SEMA3B-209ENST00000456560 ZNF702PQ9H963 129 aa13.73□□□□□ -0.21
SEMA3B-209ENST00000456560 K7EMI3 77 aa13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 LGALS1P09382 135 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 ORMDL2Q53FV1 153 aa13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 PHLDA1Q8WV24 401 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 ODF3Q96PU9 254 aa13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 MRPL35Q9NZE8 188 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 A0A087WX48 190 aa13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 K7EQG2 157 aa13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 ELANEP08246 267 aa13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 MGPP08493 103 aa13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 FAM159AQ6UWV7 190 aa13.72□□□□□ -0.21
SEMA3B-209ENST00000456560 TM2D2Q9BX73 214 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms