RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 NHP2Q9NX24 153 aaKnown RBP2.22□□□□□ -2.05
HMGB1P15-201ENST00000453854 FAM215AQ9Y5M1 114 aa2.22□□□□□ -2.05
HMGB1P15-201ENST00000453854 RYR3Q15413 4870 aa2.22□□□□□ -2.05
HMGB1P15-201ENST00000453854 PLIN4Q96Q06 1357 aa2.22□□□□□ -2.05
HMGB1P15-201ENST00000453854 TACC2O95359 2948 aa2.21□□□□□ -2.05
HMGB1P15-201ENST00000453854 TCHHQ07283 1943 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 MYO18AQ92614 2054 aaKnown RBP2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 KNTC1P50748 2209 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 IGLV3-12A0A075B6K2 115 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 ODAMA1E959 279 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 OR2T8A6NH00 312 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 H3BMG7 143 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 SDCBPO00560 298 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 MT-ND4LP03901 98 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 IGLC6P0CF74 106 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZNF728P0DKX0 622 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 FXYD2P54710 66 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 LSM3P62310 102 aaKnown RBP2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 HSD17B12Q53GQ0 312 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 PABPC1L2AQ5JQF8 200 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 TMEM244Q5VVB8 128 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZNF660Q6AZW8 331 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 C7orf65Q6ZTY9 151 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 C3orf62Q6ZUJ4 267 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 DEFB119Q8N690 84 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 Q8NAQ8 132 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 C14orf144Q96I85 54 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 PPP3R2Q96LZ3 170 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 TMEM191AQ9H0A3 160 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 COA4Q9NYJ1 87 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 POLEQ07864 2286 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZNF469Q96JG9 3925 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 DCHS2Q6V1P9 2916 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 ANAPC1Q9H1A4 1944 aa2.21□□□□□ -2.06
HMGB1P15-201ENST00000453854 STAB1Q9NY15 2570 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 ESPL1Q14674 2120 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 IGLV4-60A0A075B6I1 120 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 TRAV7A0A075B6U4 112 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 TRGV5A0A0B4J1U4 118 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 C7orf66A4D0T2 115 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 LRCOL1A6NCL2 159 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 A8MWV9 139 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 F6UZH7 168 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 K7EM74 188 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 UQCRQO14949 82 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 NPFFO15130 113 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 PRB2P02812 416 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 GUCA1AP43080 201 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 RPL28P46779 137 aaKnown RBP2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 RBP2P50120 134 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 KISS1Q15726 138 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 KHDC3LQ587J8 217 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 LYZL1Q6UWQ5 148 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 DPPA3Q6W0C5 159 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 MORN4Q8NDC4 146 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 Q8NDZ9 215 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 OR4B1Q8NGF8 309 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 OR5H6Q8NGV6 325 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 PRELID3AQ96N28 172 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZNF714Q96N38 554 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 IMMP2LQ96T52 175 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 BANF2Q9H503 90 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 CCDC167Q9P0B6 97 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 TNFSF18Q9UNG2 199 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 TIMM9Q9Y5J7 89 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 MYOFQ9NZM1 2061 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 CITO14578 2027 aa2.2□□□□□ -2.06
HMGB1P15-201ENST00000453854 TNRC6AQ8NDV7 1962 aaKnown RBP2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 SHANK1Q9Y566 2161 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 NCKAP5O14513 1909 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 HEATR5AQ86XA9 2040 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 TRBV10-2A0A0K0K1G8 114 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZNF670-ZNF695F2Z2N8 137 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 H3BT86 120 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 CORTO00230 105 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 PSCAO43653 123 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 LINC00694P0DN24 101 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 FGF7P21781 194 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 EIF2B2P49770 351 aaKnown RBP2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 SUPT4H1P63272 117 aaKnown RBP2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 FAM229BQ4G0N7 80 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 TEX29Q8N6K0 151 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 C1orf64Q8NEQ6 169 aa2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 PSMG3Q9BT73 122 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 MARCOQ9UEW3 520 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 SOX21Q9Y651 276 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 NSD1Q96L73 2696 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P15-201ENST00000453854 CSPG4Q6UVK1 2322 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 TRAV40A0A0B4J280 105 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 C20orf202A1L168 122 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZNF727A8MUV8 499 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 RER1O15258 196 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 IGKV3-11P04433 115 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZNF14P17017 642 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 AKR1D1P51857 326 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 LINC00315P59091 139 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 DYNLT1P63172 113 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 PLGLB1Q02325 96 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 KLRD1Q13241 179 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 454.8 ms