RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 NUDT11Q96G61 164 aa10.36□□□□□ -0.75
VPS16-205ENST00000453689 RNASE7Q9H1E1 156 aaKnown RBP10.36□□□□□ -0.75
VPS16-205ENST00000453689 GRIFINA4D1Z8 144 aa10.35□□□□□ -0.75
VPS16-205ENST00000453689 RPS20P60866 119 aaKnown RBP10.35□□□□□ -0.75
VPS16-205ENST00000453689 OR2D3Q8NGH3 330 aa10.35□□□□□ -0.75
VPS16-205ENST00000453689 ISOC2Q96AB3 205 aa10.35□□□□□ -0.75
VPS16-205ENST00000453689 SPXQ9BT56 116 aa10.35□□□□□ -0.75
VPS16-205ENST00000453689 XKRY2A2RUG3 117 aa10.34□□□□□ -0.75
VPS16-205ENST00000453689 SPINK4O60575 86 aa10.34□□□□□ -0.75
VPS16-205ENST00000453689 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
VPS16-205ENST00000453689 ERVFC1-1P60608 527 aa10.34□□□□□ -0.75
VPS16-205ENST00000453689 ZNF575Q86XF7 245 aa10.34□□□□□ -0.75
VPS16-205ENST00000453689 C9orf85Q96MD7 179 aa10.34□□□□□ -0.75
VPS16-205ENST00000453689 NDUFAF3Q9BU61 184 aa10.34□□□□□ -0.75
VPS16-205ENST00000453689 RPP21Q9H633 154 aaKnown RBP10.34□□□□□ -0.75
VPS16-205ENST00000453689 NACAE9PAV3 2078 aa10.34□□□□□ -0.75
VPS16-205ENST00000453689 KMT2AQ03164 3969 aa10.33□□□□□ -0.76
VPS16-205ENST00000453689 F8W036 122 aa10.33□□□□□ -0.76
VPS16-205ENST00000453689 H3BVH4 76 aa10.33□□□□□ -0.76
VPS16-205ENST00000453689 GATCO43716 136 aaKnown RBP10.33□□□□□ -0.76
VPS16-205ENST00000453689 MED14OSP0DP75 135 aa10.33□□□□□ -0.76
VPS16-205ENST00000453689 ADCYAP1P18509 176 aa10.33□□□□□ -0.76
VPS16-205ENST00000453689 PNRC1Q12796 327 aaPredicted RBP10.33□□□□□ -0.76
VPS16-205ENST00000453689 LGALS9BQ3B8N2 356 aa10.33□□□□□ -0.76
VPS16-205ENST00000453689 LINC00612Q8N6U2 182 aa10.33□□□□□ -0.76
VPS16-205ENST00000453689 FAM210BQ96KR6 192 aa10.33□□□□□ -0.76
VPS16-205ENST00000453689 OSTCQ9NRP0 149 aa10.33□□□□□ -0.76
VPS16-205ENST00000453689 IL36BQ9NZH7 164 aa10.33□□□□□ -0.76
VPS16-205ENST00000453689 TRGV1A0A0A0MS02 117 aa10.32□□□□□ -0.76
VPS16-205ENST00000453689 M0R2P5 195 aa10.32□□□□□ -0.76
VPS16-205ENST00000453689 ATP5G1P05496 136 aa10.32□□□□□ -0.76
VPS16-205ENST00000453689 ARMS2P0C7Q2 107 aa10.32□□□□□ -0.76
VPS16-205ENST00000453689 CT83Q5H943 113 aa10.32□□□□□ -0.76
VPS16-205ENST00000453689 C15orf54Q8N8G6 183 aa10.32□□□□□ -0.76
VPS16-205ENST00000453689 SFRP2Q96HF1 295 aa10.32□□□□□ -0.76
VPS16-205ENST00000453689 SEC11CQ9BY50 192 aa10.32□□□□□ -0.76
VPS16-205ENST00000453689 MRPL16Q9NX20 251 aaKnown RBP10.32□□□□□ -0.76
VPS16-205ENST00000453689 GAGE12BA1L429 117 aa10.31□□□□□ -0.76
VPS16-205ENST00000453689 GAGE7O76087 117 aa10.31□□□□□ -0.76
VPS16-205ENST00000453689 GAGE12FP0CL80 117 aa10.31□□□□□ -0.76
VPS16-205ENST00000453689 GAGE12GP0CL81 117 aa10.31□□□□□ -0.76
VPS16-205ENST00000453689 GAGE12IP0CL82 117 aa10.31□□□□□ -0.76
VPS16-205ENST00000453689 TMEM88Q6PEY1 159 aa10.31□□□□□ -0.76
VPS16-205ENST00000453689 Q6ZTI0 123 aa10.31□□□□□ -0.76
VPS16-205ENST00000453689 SCRT2Q9NQ03 307 aa10.31□□□□□ -0.76
VPS16-205ENST00000453689 MUC4Q99102 2169 aa10.31□□□□□ -0.76
VPS16-205ENST00000453689 F5H768 121 aa10.3□□□□□ -0.76
VPS16-205ENST00000453689 SNAI2O43623 268 aa10.3□□□□□ -0.76
VPS16-205ENST00000453689 GZMBP10144 247 aa10.3□□□□□ -0.76
VPS16-205ENST00000453689 NDUFA5Q16718 116 aa10.3□□□□□ -0.76
VPS16-205ENST00000453689 FER1L6-AS1Q8NA97 138 aa10.3□□□□□ -0.76
VPS16-205ENST00000453689 OR10G8Q8NGN5 311 aa10.3□□□□□ -0.76
VPS16-205ENST00000453689 RASL10AQ92737 203 aa10.3□□□□□ -0.76
VPS16-205ENST00000453689 PTH2Q96A98 100 aa10.3□□□□□ -0.76
VPS16-205ENST00000453689 TRGV2A0A075B6R0 118 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 A0A1W2PPQ1 181 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 A8MWL6 223 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 OR5AL1P0C617 328 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 IGLC6P0CF74 106 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 PIK3CD-AS1Q5SR53 167 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 SYT8Q8NBV8 401 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 C18orf15Q96N68 181 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 SSBP4Q9BWG4 385 aaPredicted RBP10.29□□□□□ -0.76
VPS16-205ENST00000453689 CARHSP1Q9Y2V2 147 aaKnown RBP10.29□□□□□ -0.76
VPS16-205ENST00000453689 PHLDA3Q9Y5J5 127 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 V9GYV3 84 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 DNAH6Q9C0G6 4158 aa10.29□□□□□ -0.76
VPS16-205ENST00000453689 VPS13DQ5THJ4 4388 aa10.28□□□□□ -0.76
VPS16-205ENST00000453689 P0DMU3 169 aa10.28□□□□□ -0.76
VPS16-205ENST00000453689 FAM231AP0DMU4 169 aa10.28□□□□□ -0.76
VPS16-205ENST00000453689 FAM231CP0DMU5 169 aa10.28□□□□□ -0.76
VPS16-205ENST00000453689 ZNF876PQ49A33 203 aa10.28□□□□□ -0.76
VPS16-205ENST00000453689 C10orf91Q5T1B1 145 aa10.28□□□□□ -0.76
VPS16-205ENST00000453689 ZFP82Q8N141 532 aa10.28□□□□□ -0.76
VPS16-205ENST00000453689 TPPP3Q9BW30 176 aa10.28□□□□□ -0.76
VPS16-205ENST00000453689 PPP1R2P9O14990 202 aa10.27□□□□□ -0.77
VPS16-205ENST00000453689 CTRLP40313 264 aa10.27□□□□□ -0.77
VPS16-205ENST00000453689 C15orf53Q8NAA6 179 aa10.27□□□□□ -0.77
VPS16-205ENST00000453689 TSKUQ8WUA8 353 aa10.27□□□□□ -0.77
VPS16-205ENST00000453689 FAM231BA6NCW3 169 aa10.26□□□□□ -0.77
VPS16-205ENST00000453689 F2Z2F3 143 aa10.26□□□□□ -0.77
VPS16-205ENST00000453689 M0R381 172 aa10.26□□□□□ -0.77
VPS16-205ENST00000453689 NXPH4O95158 308 aa10.26□□□□□ -0.77
VPS16-205ENST00000453689 DMRTA1Q5VZB9 504 aa10.26□□□□□ -0.77
VPS16-205ENST00000453689 SLC7A5P1Q8MH63 180 aa10.26□□□□□ -0.77
VPS16-205ENST00000453689 OR10AG1Q8NH19 301 aa10.26□□□□□ -0.77
VPS16-205ENST00000453689 GTSF1Q8WW33 167 aa10.26□□□□□ -0.77
VPS16-205ENST00000453689 GFRA4Q9GZZ7 299 aa10.26□□□□□ -0.77
VPS16-205ENST00000453689 TRAV4A0A0B4J268 109 aa10.25□□□□□ -0.77
VPS16-205ENST00000453689 MT-ND4LP03901 98 aa10.25□□□□□ -0.77
VPS16-205ENST00000453689 HOXA5P20719 270 aa10.25□□□□□ -0.77
VPS16-205ENST00000453689 CACNG7P62955 275 aa10.25□□□□□ -0.77
VPS16-205ENST00000453689 RNF212Q495C1 297 aa10.25□□□□□ -0.77
VPS16-205ENST00000453689 SPANXN1Q5VSR9 72 aa10.25□□□□□ -0.77
VPS16-205ENST00000453689 LYZL1Q6UWQ5 148 aa10.25□□□□□ -0.77
VPS16-205ENST00000453689 ANAPC16Q96DE5 110 aa10.25□□□□□ -0.77
VPS16-205ENST00000453689 A8MWV9 139 aa10.24□□□□□ -0.77
VPS16-205ENST00000453689 RS1O15537 224 aa10.24□□□□□ -0.77
VPS16-205ENST00000453689 FOXA3P55318 350 aaPredicted RBP10.24□□□□□ -0.77
VPS16-205ENST00000453689 WDR73Q6P4I2 378 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms