RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 IGHV1-69DA0A0B4J2H0 117 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 LEPROTO15243 131 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 INAFM2P0DMQ5 153 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 CGB3P0DN86 165 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 CGB7P0DN87 165 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 Q6JHZ5 121 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 ZNF491Q8N8L2 437 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 TMEM243Q9BU79 118 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 CXXC4Q9H2H0 198 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 USP34Q70CQ2 3546 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 TRAV8-3A0A0A6YYJ7 113 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 TRGV5A0A0B4J1U4 118 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 A0A0U1RRA0 63 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 USP17L23D6RBM5 183 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 H3BRN7 92 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 CCL3P10147 92 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 TNFRSF4P43489 277 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 ZNF80P51504 273 aaPredicted RBP8.14□□□□□ -1.11
LINC00342-202ENST00000448494 CDSNQ15517 529 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 WFDC11Q8NEX6 87 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 COPS9Q8WXC6 57 aa8.14□□□□□ -1.11
LINC00342-202ENST00000448494 TRGV3P03979 118 aa8.13□□□□□ -1.11
LINC00342-202ENST00000448494 WT1P19544 449 aaPredicted RBP8.13□□□□□ -1.11
LINC00342-202ENST00000448494 RUSC1-AS1Q66K80 236 aa8.13□□□□□ -1.11
LINC00342-202ENST00000448494 LEAP2Q969E1 77 aa8.13□□□□□ -1.11
LINC00342-202ENST00000448494 SLC50A1Q9BRV3 221 aa8.13□□□□□ -1.11
LINC00342-202ENST00000448494 FER1L5A0AVI2 2057 aa8.13□□□□□ -1.11
LINC00342-202ENST00000448494 TRAV26-2A0A0B4J265 109 aa8.13□□□□□ -1.11
LINC00342-202ENST00000448494 SUMO2P61956 95 aaKnown RBP8.13□□□□□ -1.11
LINC00342-202ENST00000448494 C17orf58Q2M2W7 97 aa8.13□□□□□ -1.11
LINC00342-202ENST00000448494 FAM19A1Q7Z5A9 133 aa8.13□□□□□ -1.11
LINC00342-202ENST00000448494 APRG1Q8IVJ8 170 aa8.13□□□□□ -1.11
LINC00342-202ENST00000448494 IGHV4-4A0A075B6R2 117 aa8.12□□□□□ -1.11
LINC00342-202ENST00000448494 I3L3M4 83 aa8.12□□□□□ -1.11
LINC00342-202ENST00000448494 CXorf67Q86X51 503 aaPredicted RBP8.12□□□□□ -1.11
LINC00342-202ENST00000448494 BRK1Q8WUW1 75 aa8.12□□□□□ -1.11
LINC00342-202ENST00000448494 TNCP24821 2201 aa8.12□□□□□ -1.11
LINC00342-202ENST00000448494 DOCK7Q96N67 2140 aa8.12□□□□□ -1.11
LINC00342-202ENST00000448494 A0A0U1RQV1 116 aa8.12□□□□□ -1.11
LINC00342-202ENST00000448494 TMEM30BQ3MIR4 351 aa8.12□□□□□ -1.11
LINC00342-202ENST00000448494 SLC25A15Q9Y619 301 aa8.12□□□□□ -1.11
LINC00342-202ENST00000448494 WDFY4Q6ZS81 3184 aa8.11□□□□□ -1.11
LINC00342-202ENST00000448494 KNCNA6PVL3 124 aa8.11□□□□□ -1.11
LINC00342-202ENST00000448494 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
LINC00342-202ENST00000448494 TMEM141Q96I45 108 aa8.11□□□□□ -1.11
LINC00342-202ENST00000448494 FAM222AQ5U5X8 452 aa8.11□□□□□ -1.11
LINC00342-202ENST00000448494 IGHG2P01859 326 aa8.1□□□□□ -1.11
LINC00342-202ENST00000448494 IGHV4-34P06331 123 aa8.1□□□□□ -1.11
LINC00342-202ENST00000448494 PRSS2P07478 247 aa8.1□□□□□ -1.11
LINC00342-202ENST00000448494 IL17DQ8TAD2 202 aa8.1□□□□□ -1.11
LINC00342-202ENST00000448494 ASCC3Q8N3C0 2202 aaKnown RBP8.1□□□□□ -1.11
LINC00342-202ENST00000448494 IGHV3OR16-10A0A075B7F0 116 aa8.1□□□□□ -1.11
LINC00342-202ENST00000448494 IGKV2-40A0A087WW87 121 aaPredicted RBP8.1□□□□□ -1.11
LINC00342-202ENST00000448494 IGKV2D-40P01614 121 aaPredicted RBP8.1□□□□□ -1.11
LINC00342-202ENST00000448494 TIRAPP58753 221 aa8.1□□□□□ -1.11
LINC00342-202ENST00000448494 DAZ2Q13117 558 aaKnown RBP8.1□□□□□ -1.11
LINC00342-202ENST00000448494 C10orf55Q5SWW7 151 aa8.1□□□□□ -1.11
LINC00342-202ENST00000448494 ZNF833PQ6ZTB9 187 aa8.1□□□□□ -1.11
LINC00342-202ENST00000448494 DAZ4Q86SG3 579 aaKnown RBP8.1□□□□□ -1.11
LINC00342-202ENST00000448494 RPP25Q9BUL9 199 aaKnown RBP8.1□□□□□ -1.11
LINC00342-202ENST00000448494 DAZ1Q9NQZ3 744 aaKnown RBP8.1□□□□□ -1.11
LINC00342-202ENST00000448494 DAZ3Q9NR90 486 aaKnown RBP8.1□□□□□ -1.11
LINC00342-202ENST00000448494 LINC01565O15544 149 aa8.09□□□□□ -1.11
LINC00342-202ENST00000448494 DYNAPQ8N1N2 210 aa8.09□□□□□ -1.11
LINC00342-202ENST00000448494 PCNX2A6NKB5 2137 aa8.09□□□□□ -1.11
LINC00342-202ENST00000448494 IGKV1D-17A0A075B6S4 117 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 IGIPA6NJ69 53 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 LYZL6O75951 148 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 TSHBP01222 138 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 ZNF876PQ49A33 203 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 PMS2CLQ68D20 193 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 FAM223AQ8IWN6 122 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 RNF182Q8N6D2 247 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 A0A0J9YXY3 114 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 FAM223BA6NKX1 122 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 M0R381 172 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 SCRG1O75711 98 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 TIMM17AQ99595 171 aa8.08□□□□□ -1.12
LINC00342-202ENST00000448494 PPP1R17O96001 155 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 LINC00482Q8N8I6 264 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 CACNA1AO00555 2505 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 ZDBF2Q9HCK1 2354 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 C10orf142B7Z368 130 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 PRB4P10163 310 aaPredicted RBP8.07□□□□□ -1.12
LINC00342-202ENST00000448494 CD59P13987 128 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 PMAIP1Q13794 54 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 HCP5Q6MZN7 132 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 C1orf158Q8N1D5 194 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 Q8TAT8 98 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 LINC00574Q9H8X3 128 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 DSCAML1Q8TD84 2053 aa8.07□□□□□ -1.12
LINC00342-202ENST00000448494 RBMY1BA6NDE4 496 aaKnown RBP8.06□□□□□ -1.12
LINC00342-202ENST00000448494 RBMY1EA6NEQ0 496 aaKnown RBP8.06□□□□□ -1.12
LINC00342-202ENST00000448494 RBMY1DP0C7P1 496 aaKnown RBP8.06□□□□□ -1.12
LINC00342-202ENST00000448494 RBMY1A1P0DJD3 496 aaKnown RBP8.06□□□□□ -1.12
LINC00342-202ENST00000448494 RBMY1CP0DJD4 496 aa8.06□□□□□ -1.12
LINC00342-202ENST00000448494 RBMY1FQ15415 496 aaKnown RBP8.06□□□□□ -1.12
LINC00342-202ENST00000448494 GFRALQ6UXV0 394 aa8.06□□□□□ -1.12
LINC00342-202ENST00000448494 TMEM61Q8N0U2 210 aa8.06□□□□□ -1.12
LINC00342-202ENST00000448494 NUP37Q8NFH4 326 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms