RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 ZNF471Q9BX82 626 aaPredicted RBP13.7□□□□□ -0.22
LRCH3-208ENST00000443727 IGKV3D-20A0A0C4DH25 116 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 B4DEV8 164 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 SEC11BP0C7V7 166 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 RHOHQ15669 191 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 DPPA3Q6W0C5 159 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 SLC25A29Q8N8R3 303 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 OR11H4Q8NGC9 324 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 SFT2D1Q8WV19 159 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 PTH2Q96A98 100 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 TCEAL7Q9BRU2 100 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 ZFP30Q9Y2G7 519 aa13.69□□□□□ -0.22
LRCH3-208ENST00000443727 UMAD1C9J7I0 102 aa13.68□□□□□ -0.22
LRCH3-208ENST00000443727 LGALSLQ3ZCW2 172 aaPredicted RBP13.68□□□□□ -0.22
LRCH3-208ENST00000443727 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
LRCH3-208ENST00000443727 A0A1B0GV50 99 aa13.67□□□□□ -0.22
LRCH3-208ENST00000443727 TRBV6-4A0A1B0GX49 114 aa13.67□□□□□ -0.22
LRCH3-208ENST00000443727 BCL2L11O43521 198 aa13.67□□□□□ -0.22
LRCH3-208ENST00000443727 PFDN1O60925 122 aa13.67□□□□□ -0.22
LRCH3-208ENST00000443727 EIF5AP63241 154 aaKnown RBP13.67□□□□□ -0.22
LRCH3-208ENST00000443727 FAM162BQ5T6X4 162 aa13.67□□□□□ -0.22
LRCH3-208ENST00000443727 ZC2HC1AQ96GY0 325 aa13.67□□□□□ -0.22
LRCH3-208ENST00000443727 TNFRSF18Q9Y5U5 241 aa13.67□□□□□ -0.22
LRCH3-208ENST00000443727 K7EP13 123 aa13.66□□□□□ -0.22
LRCH3-208ENST00000443727 M0R036 132 aa13.66□□□□□ -0.22
LRCH3-208ENST00000443727 EREGO14944 169 aa13.66□□□□□ -0.22
LRCH3-208ENST00000443727 PAGE4O60829 102 aa13.66□□□□□ -0.22
LRCH3-208ENST00000443727 MGST1P10620 155 aaKnown RBP13.66□□□□□ -0.22
LRCH3-208ENST00000443727 AKR1C3P42330 323 aa13.66□□□□□ -0.22
LRCH3-208ENST00000443727 A8MWV9 139 aa13.65□□□□□ -0.22
LRCH3-208ENST00000443727 H3BVH4 76 aa13.65□□□□□ -0.22
LRCH3-208ENST00000443727 SH2D1AO60880 128 aa13.65□□□□□ -0.22
LRCH3-208ENST00000443727 DNAH10OSP0CZ25 163 aa13.65□□□□□ -0.22
LRCH3-208ENST00000443727 TIRAPP58753 221 aa13.65□□□□□ -0.22
LRCH3-208ENST00000443727 Q6ZRN7 208 aaPredicted RBP13.65□□□□□ -0.22
LRCH3-208ENST00000443727 MSRB1Q9NZV6 116 aa13.65□□□□□ -0.22
LRCH3-208ENST00000443727 TRAV8-6A0A0B4J262 113 aa13.64□□□□□ -0.23
LRCH3-208ENST00000443727 KRBOX1C9JBD0 128 aa13.64□□□□□ -0.23
LRCH3-208ENST00000443727 CRYGDP07320 174 aa13.64□□□□□ -0.23
LRCH3-208ENST00000443727 CRIP1P50238 77 aa13.64□□□□□ -0.23
LRCH3-208ENST00000443727 ERVFC1-1P60608 527 aa13.64□□□□□ -0.23
LRCH3-208ENST00000443727 C10orf126Q8N4M7 172 aa13.64□□□□□ -0.23
LRCH3-208ENST00000443727 SYT8Q8NBV8 401 aa13.64□□□□□ -0.23
LRCH3-208ENST00000443727 MBD3L1Q8WWY6 194 aa13.64□□□□□ -0.23
LRCH3-208ENST00000443727 IL36BQ9NZH7 164 aa13.64□□□□□ -0.23
LRCH3-208ENST00000443727 TRBV6-1A0A0K0K1D8 114 aa13.63□□□□□ -0.23
LRCH3-208ENST00000443727 GRIFINA4D1Z8 144 aa13.63□□□□□ -0.23
LRCH3-208ENST00000443727 KRTAP10-2P60368 255 aa13.63□□□□□ -0.23
LRCH3-208ENST00000443727 OR10J3Q5JRS4 329 aa13.63□□□□□ -0.23
LRCH3-208ENST00000443727 PIK3CD-AS1Q5SR53 167 aa13.63□□□□□ -0.23
LRCH3-208ENST00000443727 ZFP2Q6ZN57 461 aa13.63□□□□□ -0.23
LRCH3-208ENST00000443727 COX8CQ7Z4L0 72 aa13.63□□□□□ -0.23
LRCH3-208ENST00000443727 PARLQ9H300 379 aa13.63□□□□□ -0.23
LRCH3-208ENST00000443727 TMSB15BA0A087X1C1 80 aa13.62□□□□□ -0.23
LRCH3-208ENST00000443727 IGHV3-38A0A0C4DH36 116 aa13.62□□□□□ -0.23
LRCH3-208ENST00000443727 LTAP01374 205 aa13.62□□□□□ -0.23
LRCH3-208ENST00000443727 H2AFB1P0C5Y9 115 aa13.62□□□□□ -0.23
LRCH3-208ENST00000443727 TPT1P13693 172 aaKnown RBP13.62□□□□□ -0.23
LRCH3-208ENST00000443727 TMUB2Q71RG4 321 aa13.62□□□□□ -0.23
LRCH3-208ENST00000443727 KRTAP17-1Q9BYP8 105 aa13.62□□□□□ -0.23
LRCH3-208ENST00000443727 CDK2AP2O75956 126 aa13.61□□□□□ -0.23
LRCH3-208ENST00000443727 S100A9P06702 114 aaKnown RBP13.61□□□□□ -0.23
LRCH3-208ENST00000443727 ARMS2P0C7Q2 107 aa13.61□□□□□ -0.23
LRCH3-208ENST00000443727 ZNF674Q2M3X9 581 aa13.61□□□□□ -0.23
LRCH3-208ENST00000443727 ATP6V0E2Q8NHE4 81 aa13.61□□□□□ -0.23
LRCH3-208ENST00000443727 PHLDA3Q9Y5J5 127 aa13.61□□□□□ -0.23
LRCH3-208ENST00000443727 DMRTA1Q5VZB9 504 aa13.6□□□□□ -0.23
LRCH3-208ENST00000443727 Q6ZSN1 163 aa13.6□□□□□ -0.23
LRCH3-208ENST00000443727 GTSF1LQ9H1H1 148 aa13.6□□□□□ -0.23
LRCH3-208ENST00000443727 JPT2Q9H910 190 aa13.6□□□□□ -0.23
LRCH3-208ENST00000443727 BOLA1Q9Y3E2 137 aa13.6□□□□□ -0.23
LRCH3-208ENST00000443727 LINC01559Q495D7 138 aa13.59□□□□□ -0.23
LRCH3-208ENST00000443727 DNLZQ5SXM8 178 aa13.59□□□□□ -0.23
LRCH3-208ENST00000443727 SCO2A0A1W2PP80 73 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 GAGE12JA6NER3 117 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 M0R381 172 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 RHODO00212 210 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 GAGE1Q13065 139 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 GAGE4Q13068 117 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 GAGE5Q13069 117 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 GAGE13Q4V321 117 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 LELP1Q5T871 98 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 FAM74A4Q5TZK3 123 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 SAMD10Q9BYL1 202 aa13.58□□□□□ -0.24
LRCH3-208ENST00000443727 LINC01556Q5JQF7 62 aa13.57□□□□□ -0.24
LRCH3-208ENST00000443727 PGPEP1Q9NXJ5 209 aa13.57□□□□□ -0.24
LRCH3-208ENST00000443727 PSCAO43653 123 aa13.56□□□□□ -0.24
LRCH3-208ENST00000443727 IGHV3-30P01768 117 aa13.56□□□□□ -0.24
LRCH3-208ENST00000443727 IGHV3-33P01772 117 aa13.56□□□□□ -0.24
LRCH3-208ENST00000443727 IGHV3-30-3P0DP02 117 aa13.56□□□□□ -0.24
LRCH3-208ENST00000443727 IGHV3-30-5P0DP03 117 aa13.56□□□□□ -0.24
LRCH3-208ENST00000443727 EIF5AL1Q6IS14 154 aaKnown RBP13.56□□□□□ -0.24
LRCH3-208ENST00000443727 BAGE2Q86Y30 109 aa13.56□□□□□ -0.24
LRCH3-208ENST00000443727 ZFP82Q8N141 532 aa13.56□□□□□ -0.24
LRCH3-208ENST00000443727 A0A087WTM6 91 aa13.55□□□□□ -0.24
LRCH3-208ENST00000443727 A0A087WWL8 130 aa13.55□□□□□ -0.24
LRCH3-208ENST00000443727 UFSP1Q6NVU6 142 aa13.55□□□□□ -0.24
LRCH3-208ENST00000443727 C14orf178Q8N769 122 aaPredicted RBP13.55□□□□□ -0.24
LRCH3-208ENST00000443727 GNG13Q9P2W3 67 aa13.55□□□□□ -0.24
LRCH3-208ENST00000443727 LRP1BQ9NZR2 4599 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms