RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 PKIAP61925 76 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 ZNF415Q09FC8 603 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 SMAGPQ0VAQ4 97 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 DAZ2Q13117 558 aaKnown RBP2.09□□□□□ -2.07
LINC00393-201ENST00000443621 ERCC8Q13216 396 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 CD300EQ496F6 205 aaPredicted RBP2.09□□□□□ -2.07
LINC00393-201ENST00000443621 MRPL51Q4U2R6 128 aaKnown RBP2.09□□□□□ -2.07
LINC00393-201ENST00000443621 PYY3Q5JQD4 70 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 GDF5OSQ5U4N7 250 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 SPANXN1Q5VSR9 72 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 GFI1BQ5VTD9 330 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 LGALS9CQ6DKI2 356 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 C10orf99Q6UWK7 81 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 TEX43Q6ZNM6 134 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 TRPT1Q86TN4 253 aaKnown RBP2.09□□□□□ -2.07
LINC00393-201ENST00000443621 NIT1Q86X76 327 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 BOD1L2Q8IYS8 172 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 KIR2DL5AQ8N109 375 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 LINC00482Q8N8I6 264 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 Q8N8P6 123 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 OR10D4PQ8NGN7 298 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 KIR2DL5BQ8NHK3 375 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 PRSS3P2Q8NHM4 247 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 Q8TAT8 98 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 TMEM158Q8WZ71 300 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 RASL10AQ92737 203 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 RNF185Q96GF1 192 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 DNAJC30Q96LL9 226 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 PRELID3AQ96N28 172 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 TMEM70Q9BUB7 260 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 MAP1LC3CQ9BXW4 147 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 SAMD10Q9BYL1 202 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 ZMAT4Q9H898 229 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 MAP6D1Q9H9H5 199 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 PGPEP1Q9NXJ5 209 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 KIF25-AS1Q9Y6Z4 181 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 NF1P21359 2839 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 MYO9AB2RTY4 2548 aa2.09□□□□□ -2.08
LINC00393-201ENST00000443621 ANK3Q12955 4377 aaKnown RBP2.08□□□□□ -2.08
LINC00393-201ENST00000443621 NSD1Q96L73 2696 aaPredicted RBP2.08□□□□□ -2.08
LINC00393-201ENST00000443621 IGLV2-18A0A075B6J9 118 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 IGHV3OR16-13A0A075B7E8 117 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 IGHV3OR16-8A0A075B7F1 116 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 IGHV3-49A0A0A0MS15 119 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 IGHV3-74A0A0B4J1X5 117 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 IGHV3-16A0A0C4DH30 117 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 IGHV3-66A0A0C4DH42 116 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 TRBV27A0A0K0K1C4 114 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 GRIFINA4D1Z8 144 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 GAGE10A6NGK3 116 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 D6R8Y8 96 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 F8WDY8 70 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 M0R2P5 195 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 M0R2Z0 102 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 VCYO14598 125 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 EIF4EBP3O60516 100 aaPredicted RBP2.08□□□□□ -2.08
LINC00393-201ENST00000443621 NCR2O95944 276 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 HBDP02042 147 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 SNRPCP09234 159 aaKnown RBP2.08□□□□□ -2.08
LINC00393-201ENST00000443621 CD7P09564 240 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF688P0C7X2 276 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 FCER1GP30273 86 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 RNASE4P34096 147 aaKnown RBP2.08□□□□□ -2.08
LINC00393-201ENST00000443621 POLR2KP53803 58 aaKnown RBP2.08□□□□□ -2.08
LINC00393-201ENST00000443621 LINC00310P59036 64 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 LINC00315P59091 139 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 DEFB131AP59861 70 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 SUMO2P61956 95 aaKnown RBP2.08□□□□□ -2.08
LINC00393-201ENST00000443621 LAGE3Q14657 143 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 ODF3L2Q3SX64 289 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 TMEM97Q5BJF2 176 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 PAPPA-AS1Q5QFB9 102 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 IGFL4Q6B9Z1 124 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF705AQ6ZN79 300 aaPredicted RBP2.08□□□□□ -2.08
LINC00393-201ENST00000443621 FA2HQ7L5A8 372 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 STHQ8IWL8 128 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 NRACQ8N912 160 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 IL17DQ8TAD2 202 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 TMEM263Q8WUH6 116 aaKnown RBP2.08□□□□□ -2.08
LINC00393-201ENST00000443621 C16orf74Q96GX8 76 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 DUX5Q96PT3 197 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 KIR2DL4Q99706 377 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 OVOL2Q9BRP0 275 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF747Q9BV97 191 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 NIT2Q9NQR4 276 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 C11orf21Q9P2W6 132 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 GOLT1BQ9Y3E0 138 aa2.08□□□□□ -2.08
LINC00393-201ENST00000443621 AGRNO00468 2067 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 TRAV12-1A0A0B4J245 112 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 TRAV12-3A0A0B4J271 114 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 IGHV1-24A0A0C4DH33 117 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 TEX48A0A1B0GUV7 120 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 TRBV6-4A0A1B0GX49 114 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 INAFM1C9JVW0 142 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 F6UB75 175 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 SYS1-DBNDD2H3BUS1 97 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 H3BVH4 76 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 H7C423 109 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 SIVA1O15304 175 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 DLEU1O43261 78 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms