RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 RBAKDNA6NC62 111 aa15.46■□□□□ 0.07
SHOX2-203ENST00000441443 IGF1P05019 195 aa15.46■□□□□ 0.07
SHOX2-203ENST00000441443 CLEC3BP05452 202 aa15.46■□□□□ 0.07
SHOX2-203ENST00000441443 ERG28Q9UKR5 140 aa15.46■□□□□ 0.07
SHOX2-203ENST00000441443 SLC50A1Q9BRV3 221 aa15.46■□□□□ 0.07
SHOX2-203ENST00000441443 PKD1L2Q7Z442 2459 aa15.46■□□□□ 0.07
SHOX2-203ENST00000441443 SCGB2A1O75556 95 aa15.46■□□□□ 0.06
SHOX2-203ENST00000441443 COX6B1P14854 86 aa15.46■□□□□ 0.06
SHOX2-203ENST00000441443 C15orf32Q32M92 178 aa15.46■□□□□ 0.06
SHOX2-203ENST00000441443 PRR9Q5T870 116 aa15.46■□□□□ 0.06
SHOX2-203ENST00000441443 NDUFA11Q86Y39 141 aa15.46■□□□□ 0.06
SHOX2-203ENST00000441443 C14orf178Q8N769 122 aaPredicted RBP15.46■□□□□ 0.06
SHOX2-203ENST00000441443 SS18L2Q9UHA2 77 aa15.46■□□□□ 0.06
SHOX2-203ENST00000441443 TRAV8-2A0A0B4J237 113 aa15.45■□□□□ 0.06
SHOX2-203ENST00000441443 KLRB1Q12918 225 aa15.45■□□□□ 0.06
SHOX2-203ENST00000441443 OR11H6Q8NGC7 330 aa15.45■□□□□ 0.06
SHOX2-203ENST00000441443 ANAPC13Q9BS18 74 aa15.45■□□□□ 0.06
SHOX2-203ENST00000441443 ZFAND3Q9H8U3 227 aa15.45■□□□□ 0.06
SHOX2-203ENST00000441443 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.45■□□□□ 0.06
SHOX2-203ENST00000441443 MGPP08493 103 aa15.44■□□□□ 0.06
SHOX2-203ENST00000441443 Q6ZS46 218 aa15.43■□□□□ 0.06
SHOX2-203ENST00000441443 ANKRD29Q8N6D5 301 aa15.43■□□□□ 0.06
SHOX2-203ENST00000441443 CELSR1Q9NYQ6 3014 aa15.43■□□□□ 0.06
SHOX2-203ENST00000441443 IGHV4-4A0A075B6R2 117 aa15.43■□□□□ 0.06
SHOX2-203ENST00000441443 A8MWV9 139 aa15.43■□□□□ 0.06
SHOX2-203ENST00000441443 TIMD4Q96H15 378 aa15.43■□□□□ 0.06
SHOX2-203ENST00000441443 SCGB1C2P0DMR2 95 aa15.43■□□□□ 0.06
SHOX2-203ENST00000441443 ECSCRQ19T08 205 aa15.43■□□□□ 0.06
SHOX2-203ENST00000441443 CLPSL1A2RUU4 121 aa15.42■□□□□ 0.06
SHOX2-203ENST00000441443 ZNF688P0C7X2 276 aa15.42■□□□□ 0.06
SHOX2-203ENST00000441443 C11orf86A6NJI1 115 aa15.42■□□□□ 0.06
SHOX2-203ENST00000441443 DUSP14O95147 198 aaKnown RBP15.42■□□□□ 0.06
SHOX2-203ENST00000441443 A0A0J9YY99 117 aa15.41■□□□□ 0.06
SHOX2-203ENST00000441443 CFC1BP0CG36 223 aa15.41■□□□□ 0.06
SHOX2-203ENST00000441443 CFC1P0CG37 223 aa15.41■□□□□ 0.06
SHOX2-203ENST00000441443 CLEC19AQ6UXS0 136 aa15.41■□□□□ 0.06
SHOX2-203ENST00000441443 ZFYVE26Q68DK2 2539 aa15.41■□□□□ 0.06
SHOX2-203ENST00000441443 IGHV7-81A0A0B4J1V7 117 aa15.41■□□□□ 0.06
SHOX2-203ENST00000441443 CRYGDP07320 174 aa15.41■□□□□ 0.06
SHOX2-203ENST00000441443 CENPEQ02224 2701 aa15.4■□□□□ 0.06
SHOX2-203ENST00000441443 RNF223E7ERA6 249 aa15.4■□□□□ 0.06
SHOX2-203ENST00000441443 S100A4P26447 101 aaKnown RBP15.4■□□□□ 0.06
SHOX2-203ENST00000441443 LYRM7Q5U5X0 104 aa15.4■□□□□ 0.06
SHOX2-203ENST00000441443 MYO18BQ8IUG5 2567 aa15.39■□□□□ 0.05
SHOX2-203ENST00000441443 LY6G5BQ8NDX9 201 aa15.39■□□□□ 0.05
SHOX2-203ENST00000441443 PRTN3P24158 256 aa15.39■□□□□ 0.05
SHOX2-203ENST00000441443 DEFB1P60022 68 aa15.39■□□□□ 0.05
SHOX2-203ENST00000441443 ZFAND6Q6FIF0 208 aa15.39■□□□□ 0.05
SHOX2-203ENST00000441443 ACACBO00763 2458 aa15.39■□□□□ 0.05
SHOX2-203ENST00000441443 ANXA2RQ3ZCQ2 193 aa15.38■□□□□ 0.05
SHOX2-203ENST00000441443 TSPEAR-AS2P59090 65 aa15.38■□□□□ 0.05
SHOX2-203ENST00000441443 RAX2Q96IS3 184 aa15.38■□□□□ 0.05
SHOX2-203ENST00000441443 C9orf47Q6ZRZ4 202 aa15.38■□□□□ 0.05
SHOX2-203ENST00000441443 TEX29Q8N6K0 151 aa15.38■□□□□ 0.05
SHOX2-203ENST00000441443 DPH3P1Q9H4G8 78 aa15.38■□□□□ 0.05
SHOX2-203ENST00000441443 CRIP2P52943 208 aaPredicted RBP15.37■□□□□ 0.05
SHOX2-203ENST00000441443 UCNP55089 124 aa15.37■□□□□ 0.05
SHOX2-203ENST00000441443 PHLDA3Q9Y5J5 127 aa15.37■□□□□ 0.05
SHOX2-203ENST00000441443 IGLV4-69A0A075B6H9 119 aa15.37■□□□□ 0.05
SHOX2-203ENST00000441443 B5MCH6 92 aa15.37■□□□□ 0.05
SHOX2-203ENST00000441443 FLNCQ14315 2725 aa15.37■□□□□ 0.05
SHOX2-203ENST00000441443 TRBV20-1A0A075B6N2 111 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 A0A1W2PPR1 153 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 ODF3BA8MYP8 253 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 TSHBP01222 138 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 IGHV3-30P01768 117 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 IGHV3-30-5P0DP03 117 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 FBXL19-AS1Q494R0 122 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 C10orf126Q8N4M7 172 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 C16orf92Q96LL3 132 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 UBTD1Q9HAC8 227 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 H7C2G1 150 aa15.36■□□□□ 0.05
SHOX2-203ENST00000441443 ARL3P36405 182 aa15.35■□□□□ 0.05
SHOX2-203ENST00000441443 TRPT1Q86TN4 253 aaKnown RBP15.35■□□□□ 0.05
SHOX2-203ENST00000441443 SBSPONQ8IVN8 264 aa15.35■□□□□ 0.05
SHOX2-203ENST00000441443 CCDC140Q96MF4 163 aa15.35■□□□□ 0.05
SHOX2-203ENST00000441443 C9JAW5 83 aa15.35■□□□□ 0.05
SHOX2-203ENST00000441443 TMEM170BQ5T4T1 132 aa15.35■□□□□ 0.05
SHOX2-203ENST00000441443 VMO1Q7Z5L0 202 aa15.35■□□□□ 0.05
SHOX2-203ENST00000441443 TP53TG1Q9Y2A0 90 aa15.35■□□□□ 0.05
SHOX2-203ENST00000441443 CFAP46Q8IYW2 2715 aa15.35■□□□□ 0.05
SHOX2-203ENST00000441443 FAM208BQ5VWN6 2430 aa15.34■□□□□ 0.05
SHOX2-203ENST00000441443 CSPG4Q6UVK1 2322 aa15.34■□□□□ 0.05
SHOX2-203ENST00000441443 G3V318 75 aa15.34■□□□□ 0.05
SHOX2-203ENST00000441443 RPL39P62891 51 aaKnown RBP15.34■□□□□ 0.05
SHOX2-203ENST00000441443 Q8N6K4 173 aa15.34■□□□□ 0.05
SHOX2-203ENST00000441443 C20orf173Q96LM9 149 aa15.34■□□□□ 0.05
SHOX2-203ENST00000441443 PRO1854Q9UHT4 67 aa15.34■□□□□ 0.05
SHOX2-203ENST00000441443 SLC25A20O43772 301 aa15.34■□□□□ 0.05
SHOX2-203ENST00000441443 HERVK_113P61574 105 aa15.34■□□□□ 0.05
SHOX2-203ENST00000441443 METTL26Q96S19 204 aa15.34■□□□□ 0.05
SHOX2-203ENST00000441443 GAGE5Q13069 117 aa15.33■□□□□ 0.05
SHOX2-203ENST00000441443 GAGE6Q13070 117 aa15.33■□□□□ 0.05
SHOX2-203ENST00000441443 VCX2Q9H322 139 aa15.33■□□□□ 0.05
SHOX2-203ENST00000441443 Q8N9W7 124 aa15.33■□□□□ 0.04
SHOX2-203ENST00000441443 ATP6V0E1O15342 81 aa15.33■□□□□ 0.04
SHOX2-203ENST00000441443 GNRH2O43555 120 aa15.33■□□□□ 0.04
SHOX2-203ENST00000441443 AJUBAQ96IF1 538 aa15.33■□□□□ 0.04
SHOX2-203ENST00000441443 NHLRC4P0CG21 123 aaPredicted RBP15.32■□□□□ 0.04
SHOX2-203ENST00000441443 ZFP36P26651 326 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 439.3 ms