RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SBSPONQ8IVN8 264 aa12.91□□□□□ -0.34
PMS1-213ENST00000441310 ERCC8Q13216 396 aa12.91□□□□□ -0.34
PMS1-213ENST00000441310 TRPT1Q86TN4 253 aaKnown RBP12.91□□□□□ -0.34
PMS1-213ENST00000441310 NRACQ8N912 160 aa12.9□□□□□ -0.34
PMS1-213ENST00000441310 MYO18BQ8IUG5 2567 aa12.9□□□□□ -0.34
PMS1-213ENST00000441310 H7C2G1 150 aa12.9□□□□□ -0.34
PMS1-213ENST00000441310 MEIG1Q5JSS6 88 aa12.9□□□□□ -0.34
PMS1-213ENST00000441310 RAX2Q96IS3 184 aa12.9□□□□□ -0.34
PMS1-213ENST00000441310 FLNCQ14315 2725 aa12.9□□□□□ -0.34
PMS1-213ENST00000441310 K7EIM0 57 aa12.89□□□□□ -0.35
PMS1-213ENST00000441310 NTN5Q8WTR8 489 aaPredicted RBP12.89□□□□□ -0.35
PMS1-213ENST00000441310 CNFNQ9BYD5 112 aa12.89□□□□□ -0.35
PMS1-213ENST00000441310 ID1P41134 155 aa12.89□□□□□ -0.35
PMS1-213ENST00000441310 EMP1P54849 157 aa12.88□□□□□ -0.35
PMS1-213ENST00000441310 PDE6HQ13956 83 aa12.88□□□□□ -0.35
PMS1-213ENST00000441310 CFHR4Q92496 578 aa12.88□□□□□ -0.35
PMS1-213ENST00000441310 IGHV3OR16-8A0A075B7F1 116 aa12.88□□□□□ -0.35
PMS1-213ENST00000441310 TRAV12-1A0A0B4J245 112 aa12.88□□□□□ -0.35
PMS1-213ENST00000441310 A0A1W2PPR1 153 aa12.88□□□□□ -0.35
PMS1-213ENST00000441310 CFC1BP0CG36 223 aa12.88□□□□□ -0.35
PMS1-213ENST00000441310 CFC1P0CG37 223 aa12.88□□□□□ -0.35
PMS1-213ENST00000441310 FBXL19-AS1Q494R0 122 aa12.88□□□□□ -0.35
PMS1-213ENST00000441310 ASIPP42127 132 aa12.88□□□□□ -0.35
PMS1-213ENST00000441310 C15orf53Q8NAA6 179 aa12.87□□□□□ -0.35
PMS1-213ENST00000441310 RASL10AQ92737 203 aa12.87□□□□□ -0.35
PMS1-213ENST00000441310 CENPVL3A0A0U1RRI6 287 aa12.87□□□□□ -0.35
PMS1-213ENST00000441310 Q6ZS46 218 aa12.86□□□□□ -0.35
PMS1-213ENST00000441310 C10orf126Q8N4M7 172 aa12.86□□□□□ -0.35
PMS1-213ENST00000441310 LINC00311Q8N616 119 aa12.86□□□□□ -0.35
PMS1-213ENST00000441310 NEXN-AS1Q8NBZ9 246 aa12.86□□□□□ -0.35
PMS1-213ENST00000441310 CENPEQ02224 2701 aa12.86□□□□□ -0.35
PMS1-213ENST00000441310 Q8N1Y9 231 aa12.86□□□□□ -0.35
PMS1-213ENST00000441310 RAB1BQ9H0U4 201 aa12.86□□□□□ -0.35
PMS1-213ENST00000441310 FAM208BQ5VWN6 2430 aa12.86□□□□□ -0.35
PMS1-213ENST00000441310 COX8CQ7Z4L0 72 aa12.86□□□□□ -0.35
PMS1-213ENST00000441310 PPDPFQ9H3Y8 114 aa12.86□□□□□ -0.35
PMS1-213ENST00000441310 CRYGBP07316 175 aa12.85□□□□□ -0.35
PMS1-213ENST00000441310 TMEM190Q8WZ59 177 aa12.85□□□□□ -0.35
PMS1-213ENST00000441310 IGHV1-3A0A0C4DH29 117 aa12.85□□□□□ -0.35
PMS1-213ENST00000441310 BUB1B-PAK6H3BSN5 160 aa12.85□□□□□ -0.35
PMS1-213ENST00000441310 IGLV1-47P01700 117 aa12.85□□□□□ -0.35
PMS1-213ENST00000441310 IGHV3-23P01764 117 aa12.85□□□□□ -0.35
PMS1-213ENST00000441310 IL17RELQ6ZVW7 336 aa12.85□□□□□ -0.35
PMS1-213ENST00000441310 DYNAPQ8N1N2 210 aa12.85□□□□□ -0.35
PMS1-213ENST00000441310 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 COX6B1P14854 86 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 BAALCQ8WXS3 180 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 SMIM2Q9BVW6 85 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 YAE1D1Q9NRH1 226 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.84□□□□□ -0.352e-12■■■■■ 45.1
PMS1-213ENST00000441310 USP9XQ93008 2570 aaPredicted RBP12.84□□□□□ -0.35
PMS1-213ENST00000441310 IGKV3D-20A0A0C4DH25 116 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 A0A0J9YY99 117 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 DEFB104AQ8WTQ1 72 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 C11orf21Q9P2W6 132 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 PRO1854Q9UHT4 67 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 TEX49A0A1B0GTD5 131 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 SPANXN1Q5VSR9 72 aa12.84□□□□□ -0.35
PMS1-213ENST00000441310 TRAV8-4A0A0B4J246 113 aa12.83□□□□□ -0.36
PMS1-213ENST00000441310 IGHV3-35A0A0C4DH35 117 aa12.83□□□□□ -0.36
PMS1-213ENST00000441310 SPRY2O43597 315 aa12.83□□□□□ -0.36
PMS1-213ENST00000441310 ODF3Q96PU9 254 aa12.83□□□□□ -0.36
PMS1-213ENST00000441310 VPREB3Q9UKI3 123 aa12.83□□□□□ -0.36
PMS1-213ENST00000441310 CELSR1Q9NYQ6 3014 aa12.83□□□□□ -0.36
PMS1-213ENST00000441310 IGSF10Q6WRI0 2623 aa12.83□□□□□ -0.36
PMS1-213ENST00000441310 IGHG4P01861 327 aa12.83□□□□□ -0.36
PMS1-213ENST00000441310 PSMG3-AS1Q96PY0 264 aa12.83□□□□□ -0.36
PMS1-213ENST00000441310 UBTD1Q9HAC8 227 aa12.83□□□□□ -0.36
PMS1-213ENST00000441310 TIMD4Q96H15 378 aa12.82□□□□□ -0.36
PMS1-213ENST00000441310 CRYBG3Q68DQ2 2970 aa12.82□□□□□ -0.36
PMS1-213ENST00000441310 TIMM23O14925 209 aa12.82□□□□□ -0.36
PMS1-213ENST00000441310 IGHV4-39P01824 125 aa12.82□□□□□ -0.36
PMS1-213ENST00000441310 RPL7P18124 248 aaKnown RBP12.82□□□□□ -0.36
PMS1-213ENST00000441310 RNF182Q8N6D2 247 aa12.82□□□□□ -0.36
PMS1-213ENST00000441310 BEX4Q9NWD9 120 aaPredicted RBP12.82□□□□□ -0.36
PMS1-213ENST00000441310 UTP20O75691 2785 aaKnown RBP12.82□□□□□ -0.36
PMS1-213ENST00000441310 GNLYP22749 145 aa12.81□□□□□ -0.36
PMS1-213ENST00000441310 C2orf66Q6UXQ4 117 aa12.81□□□□□ -0.36
PMS1-213ENST00000441310 TOMM6Q96B49 74 aa12.81□□□□□ -0.36
PMS1-213ENST00000441310 IGHV3-30P01768 117 aa12.81□□□□□ -0.36
PMS1-213ENST00000441310 IGHV3-30-5P0DP03 117 aa12.81□□□□□ -0.36
PMS1-213ENST00000441310 CHCHD5Q9BSY4 110 aa12.81□□□□□ -0.36
PMS1-213ENST00000441310 HES1Q14469 280 aa12.81□□□□□ -0.36
PMS1-213ENST00000441310 C8orf31Q8N9H6 132 aa12.81□□□□□ -0.36
PMS1-213ENST00000441310 ORMDL2Q53FV1 153 aa12.8□□□□□ -0.36
PMS1-213ENST00000441310 OR10J6PQ8NGY7 276 aa12.8□□□□□ -0.36
PMS1-213ENST00000441310 SMAD5-AS1Q9Y6J3 95 aa12.8□□□□□ -0.36
PMS1-213ENST00000441310 SRSF2Q01130 221 aaKnown RBP12.8□□□□□ -0.36
PMS1-213ENST00000441310 Q1RN00 199 aa12.8□□□□□ -0.36
PMS1-213ENST00000441310 Q6Q795 121 aa12.8□□□□□ -0.36
PMS1-213ENST00000441310 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
PMS1-213ENST00000441310 C19orf84I3L1E1 186 aa12.79□□□□□ -0.36
PMS1-213ENST00000441310 M0QXV9 152 aa12.79□□□□□ -0.36
PMS1-213ENST00000441310 RPL39LQ96EH5 51 aaKnown RBP12.79□□□□□ -0.36
PMS1-213ENST00000441310 POLQO75417 2590 aa12.79□□□□□ -0.36
PMS1-213ENST00000441310 ELANEP08246 267 aa12.79□□□□□ -0.36
PMS1-213ENST00000441310 TRAV2A0A0B4J234 112 aa12.79□□□□□ -0.36
PMS1-213ENST00000441310 C11orf71Q6IPW1 123 aa12.78□□□□□ -0.36
PMS1-213ENST00000441310 A4D1N5 150 aa12.78□□□□□ -0.36
PMS1-213ENST00000441310 TSPEAR-AS2P59090 65 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms