RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 FAM74A3Q4VXF1 159 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 SAMD13Q5VXD3 122 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 AMTNQ6UX39 209 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 FOXI2Q6ZQN5 318 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 C9orf47Q6ZRZ4 202 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 COX8CQ7Z4L0 72 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 TMEM183AQ8IXX5 376 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 ZFAND2AQ8N6M9 145 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 FRZBQ92765 325 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 ISOC2Q96AB3 205 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 ZC2HC1AQ96GY0 325 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 NIPSNAP3BQ9BS92 247 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 SAV1Q9H4B6 383 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-206ENST00000441089 PPP1R14DQ9NXH3 145 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 ZNF492Q9P255 531 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 NAT8Q9UHE5 227 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 LY96Q9Y6Y9 160 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 C7orf77A4D0Y5 90 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 C19orf71A6NCJ1 209 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 OR11H12B2RN74 326 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 M0R2N4 97 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 IGKV3-20P01619 116 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 S100A9P06702 114 aaKnown RBP3.42□□□□□ -1.86
PTPN4-206ENST00000441089 HLA-DRB4P13762 266 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 CRISP2P16562 243 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 GNG4P50150 75 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 FXYD7P58549 80 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 BTN1A1Q13410 526 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 ADIRFQ15847 76 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 ACTL10Q5JWF8 245 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 DEFB125Q8N687 156 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 OR10J6PQ8NGY7 276 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 LINC00477Q96M19 166 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 RNASE7Q9H1E1 156 aaKnown RBP3.42□□□□□ -1.86
PTPN4-206ENST00000441089 APLNQ9ULZ1 77 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 ZFP30Q9Y2G7 519 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 HLA-DRB4X5D2U9 266 aa3.42□□□□□ -1.86
PTPN4-206ENST00000441089 LOC102724200A0A096LPH7 203 aaPredicted RBP3.41□□□□□ -1.86
PTPN4-206ENST00000441089 FBLL1A6NHQ2 334 aaKnown RBP3.41□□□□□ -1.86
PTPN4-206ENST00000441089 KLLNB2CW77 178 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 IGLL5B9A064 214 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 J3KRW8 73 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 K7EQM0 130 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 M0R036 132 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 M0R2Z0 102 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 CRXO43186 299 aaPredicted RBP3.41□□□□□ -1.86
PTPN4-206ENST00000441089 SPRY2O43597 315 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 SH2D1AO60880 128 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 IGKV2-30P06310 120 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 GIG44P09565 113 aaPredicted RBP3.41□□□□□ -1.86
PTPN4-206ENST00000441089 P0DMU3 169 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 FAM231AP0DMU4 169 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 FAM231CP0DMU5 169 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 MGST1P10620 155 aaKnown RBP3.41□□□□□ -1.86
PTPN4-206ENST00000441089 PNRC1Q12796 327 aaPredicted RBP3.41□□□□□ -1.86
PTPN4-206ENST00000441089 SPINK13Q1W4C9 94 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 RNF212Q495C1 297 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 TMEM78Q5T7P6 136 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 PRR27Q6MZM9 219 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 EBLN2Q6P2I7 272 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 FAM231DQ6ZW35 169 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 TRPT1Q86TN4 253 aaKnown RBP3.41□□□□□ -1.86
PTPN4-206ENST00000441089 SVBPQ8N300 66 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 POM121L12Q8N7R1 296 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 OR4B1Q8NGF8 309 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 C11orf45Q8TAV5 145 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 SMIM12Q96EX1 92 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 SFRP2Q96HF1 295 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 ODF3Q96PU9 254 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 LENEPQ9Y5L5 61 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 V9GYV3 84 aa3.41□□□□□ -1.86
PTPN4-206ENST00000441089 FAT1Q14517 4588 aa3.4□□□□□ -1.86
PTPN4-206ENST00000441089 TRAV12-2A0A075B6T6 113 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 TRBV7-9A0A0J9YWB2 115 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 UBE2CO00762 179 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 DUSP14O95147 198 aaKnown RBP3.4□□□□□ -1.87
PTPN4-206ENST00000441089 SNAPINO95295 136 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 CA1P00915 261 aaPredicted RBP3.4□□□□□ -1.87
PTPN4-206ENST00000441089 RPL35AP18077 110 aaKnown RBP3.4□□□□□ -1.87
PTPN4-206ENST00000441089 LEPP41159 167 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 APOC4P55056 127 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 CMC4P56277 68 aaPredicted RBP3.4□□□□□ -1.87
PTPN4-206ENST00000441089 RPL19P84098 196 aaKnown RBP3.4□□□□□ -1.87
PTPN4-206ENST00000441089 RHEBQ15382 184 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 SMUG1Q53HV7 270 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 SAPCD1Q5SSQ6 148 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 C1orf134Q5TEV5 83 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 Q5VSD8 79 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 GFI1BQ5VTD9 330 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 Q6AWC8 147 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 CBLN2Q8IUK8 224 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 OR10G8Q8NGN5 311 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 YPEL4Q96NS1 127 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 NDFIP1Q9BT67 221 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 RPS10P5Q9NQ39 176 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 OSTCQ9NRP0 149 aa3.4□□□□□ -1.87
PTPN4-206ENST00000441089 NACAE9PAV3 2078 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 A0A087WWC5 75 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 C7orf71A4D174 169 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms