RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 MGST1P10620 155 aaKnown RBP12.47□□□□□ -0.41
AC004540.1-201ENST00000439120 UBE2G2P60604 165 aa12.47□□□□□ -0.41
AC004540.1-201ENST00000439120 AKR1C8PQ5T2L2 129 aa12.47□□□□□ -0.41
AC004540.1-201ENST00000439120 DPPA3Q6W0C5 159 aa12.47□□□□□ -0.41
AC004540.1-201ENST00000439120 OR2T35Q8NGX2 323 aa12.47□□□□□ -0.41
AC004540.1-201ENST00000439120 ARL2-SNX15V9GYD0 113 aa12.47□□□□□ -0.41
AC004540.1-201ENST00000439120 TRAV34A0A0B4J273 112 aa12.46□□□□□ -0.41
AC004540.1-201ENST00000439120 PTH2Q96A98 100 aa12.46□□□□□ -0.41
AC004540.1-201ENST00000439120 LINC00479Q96M42 142 aa12.46□□□□□ -0.41
AC004540.1-201ENST00000439120 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
AC004540.1-201ENST00000439120 RNASE3P12724 160 aaKnown RBP12.45□□□□□ -0.42
AC004540.1-201ENST00000439120 ASIPP42127 132 aa12.45□□□□□ -0.42
AC004540.1-201ENST00000439120 ZNF726P1Q15940 193 aa12.45□□□□□ -0.42
AC004540.1-201ENST00000439120 LINC01556Q5JQF7 62 aa12.45□□□□□ -0.42
AC004540.1-201ENST00000439120 NKX6-2Q9C056 277 aaPredicted RBP12.45□□□□□ -0.42
AC004540.1-201ENST00000439120 APOBP04114 4563 aaKnown RBP12.44□□□□□ -0.42
AC004540.1-201ENST00000439120 PEX7O00628 323 aa12.44□□□□□ -0.42
AC004540.1-201ENST00000439120 FGF8P55075 233 aaPredicted RBP12.44□□□□□ -0.42
AC004540.1-201ENST00000439120 LGALSLQ3ZCW2 172 aaPredicted RBP12.44□□□□□ -0.42
AC004540.1-201ENST00000439120 ATP6V0E2Q8NHE4 81 aa12.44□□□□□ -0.42
AC004540.1-201ENST00000439120 DNAH5Q8TE73 4624 aa12.43□□□□□ -0.42
AC004540.1-201ENST00000439120 A8MWV9 139 aa12.43□□□□□ -0.42
AC004540.1-201ENST00000439120 LELP1Q5T871 98 aa12.43□□□□□ -0.42
AC004540.1-201ENST00000439120 Q86TA4 180 aa12.43□□□□□ -0.42
AC004540.1-201ENST00000439120 HIST1H2BAQ96A08 127 aa12.43□□□□□ -0.42
AC004540.1-201ENST00000439120 GTSF1LQ9H1H1 148 aa12.43□□□□□ -0.42
AC004540.1-201ENST00000439120 Q9HAA7 133 aa12.43□□□□□ -0.42
AC004540.1-201ENST00000439120 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
AC004540.1-201ENST00000439120 FAM74A7A6NL05 159 aa12.42□□□□□ -0.42
AC004540.1-201ENST00000439120 EPM2AB3EWF7 344 aa12.42□□□□□ -0.42
AC004540.1-201ENST00000439120 B4DEV8 164 aa12.42□□□□□ -0.42
AC004540.1-201ENST00000439120 IGHV3-30P01768 117 aa12.42□□□□□ -0.42
AC004540.1-201ENST00000439120 IGHV3-33P01772 117 aa12.42□□□□□ -0.42
AC004540.1-201ENST00000439120 IGHV3-30-3P0DP02 117 aa12.42□□□□□ -0.42
AC004540.1-201ENST00000439120 IGHV3-30-5P0DP03 117 aa12.42□□□□□ -0.42
AC004540.1-201ENST00000439120 PARLQ9H300 379 aa12.42□□□□□ -0.42
AC004540.1-201ENST00000439120 MAP1LC3B2A6NCE7 125 aa12.41□□□□□ -0.42
AC004540.1-201ENST00000439120 IBA57-AS1B1ANH7 110 aa12.41□□□□□ -0.42
AC004540.1-201ENST00000439120 ARPC5O15511 151 aa12.41□□□□□ -0.42
AC004540.1-201ENST00000439120 GCSHP23434 173 aa12.41□□□□□ -0.42
AC004540.1-201ENST00000439120 UBE2G1P62253 170 aa12.41□□□□□ -0.42
AC004540.1-201ENST00000439120 PIK3CD-AS1Q5SR53 167 aa12.41□□□□□ -0.42
AC004540.1-201ENST00000439120 ZFP2Q6ZN57 461 aa12.41□□□□□ -0.42
AC004540.1-201ENST00000439120 SYT8Q8NBV8 401 aa12.41□□□□□ -0.42
AC004540.1-201ENST00000439120 MAP1LC3BQ9GZQ8 125 aa12.41□□□□□ -0.42
AC004540.1-201ENST00000439120 RGS21Q2M5E4 152 aa12.4□□□□□ -0.42
AC004540.1-201ENST00000439120 STOML3Q8TAV4 291 aa12.4□□□□□ -0.42
AC004540.1-201ENST00000439120 IL36BQ9NZH7 164 aa12.4□□□□□ -0.42
AC004540.1-201ENST00000439120 IGLV5-52A0A0A0MRZ9 124 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 GAGE12JA6NER3 117 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 H3BVH4 76 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 M0R036 132 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 KRTAP10-1P60331 282 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 GAGE1Q13065 139 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 GAGE4Q13068 117 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 GAGE5Q13069 117 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 GAGE13Q4V321 117 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 FMC1Q96HJ9 113 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 ZFP30Q9Y2G7 519 aa12.39□□□□□ -0.43
AC004540.1-201ENST00000439120 FAM162BQ5T6X4 162 aa12.38□□□□□ -0.43
AC004540.1-201ENST00000439120 CST9LP1Q5W188 147 aa12.38□□□□□ -0.43
AC004540.1-201ENST00000439120 ZC2HC1AQ96GY0 325 aa12.38□□□□□ -0.43
AC004540.1-201ENST00000439120 RHODO00212 210 aa12.37□□□□□ -0.43
AC004540.1-201ENST00000439120 SH2D1AO60880 128 aa12.37□□□□□ -0.43
AC004540.1-201ENST00000439120 LAGE3Q14657 143 aa12.37□□□□□ -0.43
AC004540.1-201ENST00000439120 Q6ZSN1 163 aa12.37□□□□□ -0.43
AC004540.1-201ENST00000439120 OR11H4Q8NGC9 324 aa12.37□□□□□ -0.43
AC004540.1-201ENST00000439120 NTN5Q8WTR8 489 aaPredicted RBP12.37□□□□□ -0.43
AC004540.1-201ENST00000439120 FRZBQ92765 325 aa12.37□□□□□ -0.43
AC004540.1-201ENST00000439120 TCEAL7Q9BRU2 100 aa12.37□□□□□ -0.43
AC004540.1-201ENST00000439120 TM2D2Q9BX73 214 aa12.37□□□□□ -0.43
AC004540.1-201ENST00000439120 GRIFINA4D1Z8 144 aa12.36□□□□□ -0.43
AC004540.1-201ENST00000439120 KRBOX1C9JBD0 128 aa12.36□□□□□ -0.43
AC004540.1-201ENST00000439120 ARMS2P0C7Q2 107 aa12.36□□□□□ -0.43
AC004540.1-201ENST00000439120 XGP55808 180 aa12.36□□□□□ -0.43
AC004540.1-201ENST00000439120 FAM74A4Q5TZK3 123 aa12.36□□□□□ -0.43
AC004540.1-201ENST00000439120 JPT2Q9H910 190 aa12.36□□□□□ -0.43
AC004540.1-201ENST00000439120 PHLDA3Q9Y5J5 127 aa12.36□□□□□ -0.43
AC004540.1-201ENST00000439120 A0A087WWC5 75 aa12.35□□□□□ -0.43
AC004540.1-201ENST00000439120 LRCOL1A6NCL2 159 aa12.35□□□□□ -0.43
AC004540.1-201ENST00000439120 G3V3Q6 166 aa12.35□□□□□ -0.43
AC004540.1-201ENST00000439120 TPT1P13693 172 aaKnown RBP12.35□□□□□ -0.43
AC004540.1-201ENST00000439120 DMRTA1Q5VZB9 504 aa12.35□□□□□ -0.43
AC004540.1-201ENST00000439120 SAMD10Q9BYL1 202 aa12.35□□□□□ -0.43
AC004540.1-201ENST00000439120 CYTL1Q9NRR1 136 aa12.35□□□□□ -0.43
AC004540.1-201ENST00000439120 TMSB15BA0A087X1C1 80 aa12.34□□□□□ -0.43
AC004540.1-201ENST00000439120 AKR1C3P42330 323 aa12.34□□□□□ -0.43
AC004540.1-201ENST00000439120 FHITP49789 147 aa12.34□□□□□ -0.43
AC004540.1-201ENST00000439120 CRIP1P50238 77 aa12.34□□□□□ -0.43
AC004540.1-201ENST00000439120 DNLZQ5SXM8 178 aa12.34□□□□□ -0.43
AC004540.1-201ENST00000439120 C14orf178Q8N769 122 aaPredicted RBP12.34□□□□□ -0.43
AC004540.1-201ENST00000439120 Q8N814 137 aa12.34□□□□□ -0.43
AC004540.1-201ENST00000439120 M0R381 172 aa12.33□□□□□ -0.44
AC004540.1-201ENST00000439120 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
AC004540.1-201ENST00000439120 Q5VSD8 79 aa12.33□□□□□ -0.44
AC004540.1-201ENST00000439120 UFSP1Q6NVU6 142 aa12.33□□□□□ -0.44
AC004540.1-201ENST00000439120 COX8CQ7Z4L0 72 aa12.33□□□□□ -0.44
AC004540.1-201ENST00000439120 URGCP-MRPS24S4R325 110 aa12.33□□□□□ -0.44
AC004540.1-201ENST00000439120 TRAV8-3A0A0A6YYJ7 113 aa12.32□□□□□ -0.44
AC004540.1-201ENST00000439120 SMLR1H3BR10 107 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms