RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 VPREB3Q9UKI3 123 aa8.7□□□□□ -1.02
UBR4-207ENST00000425413 ASIPP42127 132 aa8.7□□□□□ -1.02
UBR4-207ENST00000425413 NMUP48645 174 aa8.7□□□□□ -1.02
UBR4-207ENST00000425413 PPP1R14DQ9NXH3 145 aa8.7□□□□□ -1.02
UBR4-207ENST00000425413 IGHV4OR15-8A0A075B7B6 117 aa8.7□□□□□ -1.02
UBR4-207ENST00000425413 A0A087WW49 117 aa8.7□□□□□ -1.02
UBR4-207ENST00000425413 C21orf62-AS1Q17RA5 79 aa8.7□□□□□ -1.02
UBR4-207ENST00000425413 DEFB113Q30KQ7 82 aa8.69□□□□□ -1.02
UBR4-207ENST00000425413 AMMECR1LQ6DCA0 310 aa8.69□□□□□ -1.02
UBR4-207ENST00000425413 RNASE8Q8TDE3 154 aaKnown RBP8.69□□□□□ -1.02
UBR4-207ENST00000425413 DCANP1Q8TF63 244 aa8.69□□□□□ -1.02
UBR4-207ENST00000425413 RPL39LQ96EH5 51 aaKnown RBP8.69□□□□□ -1.02
UBR4-207ENST00000425413 JPT2Q9H910 190 aa8.69□□□□□ -1.02
UBR4-207ENST00000425413 C2orf91Q6ZV80 131 aa8.68□□□□□ -1.02
UBR4-207ENST00000425413 NRACQ8N912 160 aa8.68□□□□□ -1.02
UBR4-207ENST00000425413 NXT2Q9NPJ8 142 aaKnown RBP8.68□□□□□ -1.02
UBR4-207ENST00000425413 HELZ2Q9BYK8 2649 aaKnown RBP8.68□□□□□ -1.02
UBR4-207ENST00000425413 J3QLI3 93 aa8.68□□□□□ -1.02
UBR4-207ENST00000425413 BRI3O95415 125 aa8.68□□□□□ -1.02
UBR4-207ENST00000425413 ID1P41134 155 aa8.68□□□□□ -1.02
UBR4-207ENST00000425413 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
UBR4-207ENST00000425413 DEFB125Q8N687 156 aa8.68□□□□□ -1.02
UBR4-207ENST00000425413 FOXC2Q99958 501 aa8.68□□□□□ -1.02
UBR4-207ENST00000425413 NAA38Q9BRA0 125 aaKnown RBP8.68□□□□□ -1.02
UBR4-207ENST00000425413 ZNF702PQ9H963 129 aa8.68□□□□□ -1.02
UBR4-207ENST00000425413 LENEPQ9Y5L5 61 aa8.68□□□□□ -1.02
UBR4-207ENST00000425413 ITPR2Q14571 2701 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 HOXD3P31249 432 aaPredicted RBP8.67□□□□□ -1.02
UBR4-207ENST00000425413 RNF151Q2KHN1 245 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 C11orf44Q8N8P7 122 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 TTTY13Q9BZ97 58 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 C7orf71A4D174 169 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 CD7P09564 240 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 HTN1P15515 57 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 FCER1GP30273 86 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 TMEM97Q5BJF2 176 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 Q6YL49 198 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 CD5LO43866 347 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 SMIM17P0DL12 118 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 RNASE3P12724 160 aaKnown RBP8.67□□□□□ -1.02
UBR4-207ENST00000425413 SLURP1P55000 103 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 LGALS9BQ3B8N2 356 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 LGALS9CQ6DKI2 356 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 PCP2Q8IVA1 136 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 Q8N8P6 123 aa8.67□□□□□ -1.02
UBR4-207ENST00000425413 CR1P17927 2039 aa8.66□□□□□ -1.02
UBR4-207ENST00000425413 NIPBLQ6KC79 2804 aaeCLIP8.66□□□□□ -1.02
UBR4-207ENST00000425413 A0A087WWL8 130 aa8.66□□□□□ -1.02
UBR4-207ENST00000425413 SPINK13Q1W4C9 94 aa8.66□□□□□ -1.02
UBR4-207ENST00000425413 FAM159AQ6UWV7 190 aa8.66□□□□□ -1.02
UBR4-207ENST00000425413 CBY1Q9Y3M2 126 aa8.66□□□□□ -1.02
UBR4-207ENST00000425413 K7EMT4 169 aa8.66□□□□□ -1.02
UBR4-207ENST00000425413 IGLV2-18A0A075B6J9 118 aa8.65□□□□□ -1.02
UBR4-207ENST00000425413 FAM74A4Q5TZK3 123 aa8.65□□□□□ -1.02
UBR4-207ENST00000425413 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.02
UBR4-207ENST00000425413 RAB37Q96AX2 223 aa8.65□□□□□ -1.02
UBR4-207ENST00000425413 MUC4Q99102 2169 aa8.65□□□□□ -1.02
UBR4-207ENST00000425413 TRAV8-6A0A0B4J262 113 aa8.65□□□□□ -1.02
UBR4-207ENST00000425413 LGALS1P09382 135 aaKnown RBP8.65□□□□□ -1.02
UBR4-207ENST00000425413 LAGE3Q14657 143 aa8.65□□□□□ -1.02
UBR4-207ENST00000425413 RASL10AQ92737 203 aa8.65□□□□□ -1.02
UBR4-207ENST00000425413 FAM19A4Q96LR4 140 aa8.65□□□□□ -1.02
UBR4-207ENST00000425413 F5H697 171 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 FGF6P10767 208 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 SNRPD3P62318 126 aaKnown RBP8.64□□□□□ -1.03
UBR4-207ENST00000425413 DPF1Q92782 380 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 TMEM160Q9NX00 188 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 AP1S3Q96PC3 154 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 DPH3P1Q9H4G8 78 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 JMJD1CQ15652 2540 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 IGHV4-4A0A075B6R2 117 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 ODF1Q14990 250 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 TCTEX1D4Q5JR98 221 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 GTSCR1Q86UQ5 136 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 MDFICQ9P1T7 246 aa8.64□□□□□ -1.03
UBR4-207ENST00000425413 KNCNA6PVL3 124 aa8.63□□□□□ -1.03
UBR4-207ENST00000425413 FSHBP01225 129 aa8.63□□□□□ -1.03
UBR4-207ENST00000425413 SMIM2Q9BVW6 85 aa8.63□□□□□ -1.03
UBR4-207ENST00000425413 IGKV2D-26A0A0A0MRZ7 120 aa8.63□□□□□ -1.03
UBR4-207ENST00000425413 KLLNB2CW77 178 aa8.63□□□□□ -1.03
UBR4-207ENST00000425413 PRM2P04554 102 aa8.63□□□□□ -1.03
UBR4-207ENST00000425413 SUMO2P61956 95 aaKnown RBP8.63□□□□□ -1.03
UBR4-207ENST00000425413 MYOZ3Q8TDC0 251 aa8.63□□□□□ -1.03
UBR4-207ENST00000425413 BOD1L2Q8IYS8 172 aa8.62□□□□□ -1.03
UBR4-207ENST00000425413 OR1N2Q8NGR9 330 aa8.62□□□□□ -1.03
UBR4-207ENST00000425413 MRPL35Q9NZE8 188 aaKnown RBP8.62□□□□□ -1.03
UBR4-207ENST00000425413 A0A0J9YX75 114 aa8.62□□□□□ -1.03
UBR4-207ENST00000425413 A0A1W2PRX2 142 aa8.62□□□□□ -1.03
UBR4-207ENST00000425413 K7EQG2 157 aa8.62□□□□□ -1.03
UBR4-207ENST00000425413 ELANEP08246 267 aa8.62□□□□□ -1.03
UBR4-207ENST00000425413 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
UBR4-207ENST00000425413 OR11H1Q8NG94 326 aa8.62□□□□□ -1.03
UBR4-207ENST00000425413 MRAP2Q96G30 205 aa8.62□□□□□ -1.03
UBR4-207ENST00000425413 HECTD1Q9ULT8 2610 aa8.62□□□□□ -1.03
UBR4-207ENST00000425413 H3BUT2 72 aa8.61□□□□□ -1.03
UBR4-207ENST00000425413 UBE2E2Q96LR5 201 aa8.61□□□□□ -1.03
UBR4-207ENST00000425413 ZNF580Q9UK33 172 aa8.61□□□□□ -1.03
UBR4-207ENST00000425413 PCP4P48539 62 aa8.61□□□□□ -1.03
UBR4-207ENST00000425413 CSTL1Q9H114 145 aa8.61□□□□□ -1.03
UBR4-207ENST00000425413 FASNP49327 2511 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms