RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 F8W1H4 67 aa10.93□□□□□ -0.66
MSH5-206ENST00000423982 IGHV3OR16-10A0A075B7F0 116 aa10.92□□□□□ -0.66
MSH5-206ENST00000423982 CCDC144NLQ6NUI1 221 aa10.92□□□□□ -0.66
MSH5-206ENST00000423982 CIDEAO60543 219 aa10.92□□□□□ -0.66
MSH5-206ENST00000423982 Q8N6K4 173 aa10.92□□□□□ -0.66
MSH5-206ENST00000423982 ZNF502Q8TBZ5 544 aa10.92□□□□□ -0.66
MSH5-206ENST00000423982 RPL39LQ96EH5 51 aaKnown RBP10.92□□□□□ -0.66
MSH5-206ENST00000423982 PRO0461Q9UI25 63 aa10.92□□□□□ -0.66
MSH5-206ENST00000423982 AKAP9Q99996 3911 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 PRTN3P24158 256 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 RRN3P1Q2M238 152 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 GAGE13Q4V321 117 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 TMEM78Q5T7P6 136 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 CCDC140Q96MF4 163 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 RNF223E7ERA6 249 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 M0R381 172 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 DEFB113Q30KQ7 82 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 Q8N9W7 124 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 WFDC12Q8WWY7 111 aa10.91□□□□□ -0.66
MSH5-206ENST00000423982 CHTOPQ9Y3Y2 248 aaKnown RBP10.91□□□□□ -0.66
MSH5-206ENST00000423982 ATP6V0E1O15342 81 aa10.9□□□□□ -0.66
MSH5-206ENST00000423982 Q5PR19 223 aa10.9□□□□□ -0.66
MSH5-206ENST00000423982 MORN3Q6PF18 240 aaPredicted RBP10.9□□□□□ -0.66
MSH5-206ENST00000423982 C8orf86Q6ZUL3 223 aa10.9□□□□□ -0.66
MSH5-206ENST00000423982 C20orf78Q9BR46 151 aa10.9□□□□□ -0.66
MSH5-206ENST00000423982 F8VRH5 84 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 SCGB3A1Q96QR1 104 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 MXRA5Q9NR99 2828 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 MYMXA0A1B0GTQ4 84 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 A0A1B0GWB2 263 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 OR11H12B2RN74 326 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 LGALS1P09382 135 aaKnown RBP10.89□□□□□ -0.67
MSH5-206ENST00000423982 HLA-DRB4P13762 266 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 PSMG4Q5JS54 123 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 OR11H1Q8NG94 326 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 OR11H2Q8NH07 326 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 PLEKHB2Q96CS7 222 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 HLA-DRB4X5D2U9 266 aa10.89□□□□□ -0.67
MSH5-206ENST00000423982 PRSS29PA6NIE9 313 aa10.88□□□□□ -0.67
MSH5-206ENST00000423982 H7C1H1 209 aa10.88□□□□□ -0.67
MSH5-206ENST00000423982 PLNP26678 52 aa10.88□□□□□ -0.67
MSH5-206ENST00000423982 EMP1P54849 157 aa10.88□□□□□ -0.67
MSH5-206ENST00000423982 C14orf178Q8N769 122 aaPredicted RBP10.88□□□□□ -0.67
MSH5-206ENST00000423982 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
MSH5-206ENST00000423982 RBAKDNA6NC62 111 aa10.88□□□□□ -0.67
MSH5-206ENST00000423982 KLHL30-AS1Q8NEE0 82 aa10.88□□□□□ -0.67
MSH5-206ENST00000423982 RASL10AQ92737 203 aa10.88□□□□□ -0.67
MSH5-206ENST00000423982 Q96MF0 132 aa10.88□□□□□ -0.67
MSH5-206ENST00000423982 LINC00527Q9UJ94 153 aa10.88□□□□□ -0.67
MSH5-206ENST00000423982 SETXQ7Z333 2677 aaKnown RBP10.88□□□□□ -0.67
MSH5-206ENST00000423982 TAL2Q16559 108 aa10.87□□□□□ -0.67
MSH5-206ENST00000423982 C20orf173Q96LM9 149 aa10.87□□□□□ -0.67
MSH5-206ENST00000423982 SPATA25Q9BR10 227 aa10.87□□□□□ -0.67
MSH5-206ENST00000423982 SLC50A1Q9BRV3 221 aa10.87□□□□□ -0.67
MSH5-206ENST00000423982 NDUFS8O00217 210 aa10.87□□□□□ -0.67
MSH5-206ENST00000423982 PRSS47A8MTI9 375 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 M0R1W7 72 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 SCGB2A1O75556 95 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 SMCPP49901 116 aaPredicted RBP10.86□□□□□ -0.67
MSH5-206ENST00000423982 PRADC1Q9BSG0 188 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 HIF1ANQ9NWT6 349 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 ZFP2Q6ZN57 461 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 NEXN-AS1Q8NBZ9 246 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 WFDC11Q8NEX6 87 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 PTH2Q96A98 100 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 LINC01549A6NIU2 74 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
MSH5-206ENST00000423982 MGPP08493 103 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 SUMO2P61956 95 aaKnown RBP10.86□□□□□ -0.67
MSH5-206ENST00000423982 FAM110DQ8TAY7 271 aaPredicted RBP10.86□□□□□ -0.67
MSH5-206ENST00000423982 BAALCQ8WXS3 180 aa10.86□□□□□ -0.67
MSH5-206ENST00000423982 MRPL16Q9NX20 251 aaKnown RBP10.86□□□□□ -0.67
MSH5-206ENST00000423982 J3QR89 54 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 SLC25A16P16260 332 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 SCGB2A2Q13296 93 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 BRD3OSQ6XYD6 125 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 CLUHP3Q96NS8 147 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 MTORP42345 2549 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 OTOGQ6ZRI0 2925 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 ZNF815PA8K554 130 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 APOMO95445 188 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 NFE4Q86UQ8 179 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 C16orf92Q96LL3 132 aa10.85□□□□□ -0.67
MSH5-206ENST00000423982 LOC107984156A0A0G2JMH3 177 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 TGFAP01135 160 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 EBI3Q14213 229 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 C2orf66Q6UXQ4 117 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 C9orf47Q6ZRZ4 202 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 ARL17AQ8IVW1 177 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 GLMPQ8WWB7 406 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 TOMM6Q96B49 74 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 ATP6V0BQ99437 205 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 CUBNO60494 3623 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 IGKV3-7A0A075B6H7 116 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 TRAV12-1A0A0B4J245 112 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 FHL3Q13643 280 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 SCGB1D4Q6XE38 83 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 ZNF418Q8TF45 676 aaPredicted RBP10.84□□□□□ -0.67
MSH5-206ENST00000423982 METTL26Q96S19 204 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms