RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 LRCOL1A6NCL2 159 aa12.39□□□□□ -0.43
SREBF1-206ENST00000423161 LELP1Q5T871 98 aa12.39□□□□□ -0.43
SREBF1-206ENST00000423161 TNFSF18Q9UNG2 199 aa12.39□□□□□ -0.43
SREBF1-206ENST00000423161 IGLV5-52A0A0A0MRZ9 124 aa12.38□□□□□ -0.43
SREBF1-206ENST00000423161 IGHV3-30P01768 117 aa12.38□□□□□ -0.43
SREBF1-206ENST00000423161 IGHV3-33P01772 117 aa12.38□□□□□ -0.43
SREBF1-206ENST00000423161 INAFM2P0DMQ5 153 aa12.38□□□□□ -0.43
SREBF1-206ENST00000423161 IGHV3-30-3P0DP02 117 aa12.38□□□□□ -0.43
SREBF1-206ENST00000423161 IGHV3-30-5P0DP03 117 aa12.38□□□□□ -0.43
SREBF1-206ENST00000423161 MGST1P10620 155 aaKnown RBP12.38□□□□□ -0.43
SREBF1-206ENST00000423161 SAPCD1Q5SSQ6 148 aa12.38□□□□□ -0.43
SREBF1-206ENST00000423161 ATP6V0E2Q8NHE4 81 aa12.38□□□□□ -0.43
SREBF1-206ENST00000423161 GTSF1LQ9H1H1 148 aa12.38□□□□□ -0.43
SREBF1-206ENST00000423161 PTTG1O95997 202 aa12.37□□□□□ -0.43
SREBF1-206ENST00000423161 Q5BKY6 102 aa12.37□□□□□ -0.43
SREBF1-206ENST00000423161 NTN5Q8WTR8 489 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-206ENST00000423161 TRAV34A0A0B4J273 112 aa12.36□□□□□ -0.43
SREBF1-206ENST00000423161 A0A1W2PRE2 83 aa12.36□□□□□ -0.43
SREBF1-206ENST00000423161 S100A4P26447 101 aaKnown RBP12.36□□□□□ -0.43
SREBF1-206ENST00000423161 LINC00479Q96M42 142 aa12.36□□□□□ -0.43
SREBF1-206ENST00000423161 PARLQ9H300 379 aa12.36□□□□□ -0.43
SREBF1-206ENST00000423161 ARL2-SNX15V9GYD0 113 aa12.36□□□□□ -0.43
SREBF1-206ENST00000423161 SMR3BP02814 79 aaPredicted RBP12.35□□□□□ -0.43
SREBF1-206ENST00000423161 RPL7L1Q6DKI1 246 aaKnown RBP12.35□□□□□ -0.43
SREBF1-206ENST00000423161 INO80EQ8NBZ0 244 aaPredicted RBP12.35□□□□□ -0.43
SREBF1-206ENST00000423161 DMBT1Q9UGM3 2413 aaPredicted RBP12.35□□□□□ -0.43
SREBF1-206ENST00000423161 BORCS7-ASMTA0A0B4J1R7 106 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 IGKV3D-20A0A0C4DH25 116 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 RNF222A6NCQ9 220 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 A8MWV9 139 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 IFNA7P01567 189 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 GIPP09681 153 aaPredicted RBP12.34□□□□□ -0.43
SREBF1-206ENST00000423161 ASIPP42127 132 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 UBE2G2P60604 165 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 HAMPP81172 84 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 ZNF726P1Q15940 193 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 LGALSLQ3ZCW2 172 aaPredicted RBP12.34□□□□□ -0.43
SREBF1-206ENST00000423161 ZFP2Q6ZN57 461 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 Q6ZSN1 163 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 Q8N814 137 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 VPS13BQ7Z7G8 4022 aa12.34□□□□□ -0.43
SREBF1-206ENST00000423161 FXYD6-FXYD2A0A087WZ82 144 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 CTXND1A0A1B0GTU2 59 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 FABP5P3A8MUU1 101 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 GAGE1Q13065 139 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 GAGE4Q13068 117 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 GAGE5Q13069 117 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 LAGE3Q14657 143 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 PIK3CD-AS1Q5SR53 167 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 Q86TA4 180 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 TMEM70Q9BUB7 260 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 BATF3Q9NR55 127 aa12.33□□□□□ -0.44
SREBF1-206ENST00000423161 PEX7O00628 323 aa12.32□□□□□ -0.44
SREBF1-206ENST00000423161 Q8N3U1 123 aa12.32□□□□□ -0.44
SREBF1-206ENST00000423161 FAT1Q14517 4588 aa12.32□□□□□ -0.44
SREBF1-206ENST00000423161 B4DEV8 164 aa12.31□□□□□ -0.44
SREBF1-206ENST00000423161 LINC00694P0DN24 101 aa12.31□□□□□ -0.44
SREBF1-206ENST00000423161 OR2T35Q8NGX2 323 aa12.31□□□□□ -0.44
SREBF1-206ENST00000423161 TM2D2Q9BX73 214 aa12.31□□□□□ -0.44
SREBF1-206ENST00000423161 JPT2Q9H910 190 aa12.31□□□□□ -0.44
SREBF1-206ENST00000423161 IL36BQ9NZH7 164 aa12.31□□□□□ -0.44
SREBF1-206ENST00000423161 FLG2Q5D862 2391 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-206ENST00000423161 SRRM2Q9UQ35 2752 aaKnown RBP12.3□□□□□ -0.44
SREBF1-206ENST00000423161 H3BVH4 76 aa12.3□□□□□ -0.44
SREBF1-206ENST00000423161 FGF8P55075 233 aaPredicted RBP12.3□□□□□ -0.44
SREBF1-206ENST00000423161 FAM74A7A6NL05 159 aa12.29□□□□□ -0.44
SREBF1-206ENST00000423161 FAM229AH3BQW9 127 aa12.29□□□□□ -0.44
SREBF1-206ENST00000423161 AKR1C8PQ5T2L2 129 aa12.29□□□□□ -0.44
SREBF1-206ENST00000423161 UFSP1Q6NVU6 142 aa12.29□□□□□ -0.44
SREBF1-206ENST00000423161 HIST1H2BAQ96A08 127 aa12.29□□□□□ -0.44
SREBF1-206ENST00000423161 SAMD10Q9BYL1 202 aa12.29□□□□□ -0.44
SREBF1-206ENST00000423161 NKX6-2Q9C056 277 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-206ENST00000423161 Q9UF83 564 aa12.29□□□□□ -0.44
SREBF1-206ENST00000423161 M0R036 132 aa12.28□□□□□ -0.44
SREBF1-206ENST00000423161 C14orf178Q8N769 122 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-206ENST00000423161 SYT8Q8NBV8 401 aa12.28□□□□□ -0.44
SREBF1-206ENST00000423161 ZC2HC1AQ96GY0 325 aa12.28□□□□□ -0.44
SREBF1-206ENST00000423161 A0A087WWC5 75 aa12.27□□□□□ -0.45
SREBF1-206ENST00000423161 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.45
SREBF1-206ENST00000423161 KRBOX1C9JBD0 128 aa12.27□□□□□ -0.45
SREBF1-206ENST00000423161 RHODO00212 210 aa12.27□□□□□ -0.45
SREBF1-206ENST00000423161 ARMS2P0C7Q2 107 aa12.27□□□□□ -0.45
SREBF1-206ENST00000423161 CRIP1P50238 77 aa12.27□□□□□ -0.45
SREBF1-206ENST00000423161 WFDC2Q14508 124 aa12.27□□□□□ -0.45
SREBF1-206ENST00000423161 DNLZQ5SXM8 178 aa12.27□□□□□ -0.45
SREBF1-206ENST00000423161 DMRTA1Q5VZB9 504 aa12.27□□□□□ -0.45
SREBF1-206ENST00000423161 DAZ4Q86SG3 579 aaKnown RBP12.27□□□□□ -0.45
SREBF1-206ENST00000423161 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.45
SREBF1-206ENST00000423161 HERC1Q15751 4861 aa12.27□□□□□ -0.45
SREBF1-206ENST00000423161 GRIFINA4D1Z8 144 aa12.26□□□□□ -0.45
SREBF1-206ENST00000423161 MAP1LC3B2A6NCE7 125 aa12.26□□□□□ -0.45
SREBF1-206ENST00000423161 SH2D1AO60880 128 aa12.26□□□□□ -0.45
SREBF1-206ENST00000423161 UBE2G1P62253 170 aa12.26□□□□□ -0.45
SREBF1-206ENST00000423161 TOR2AQ5JU69 321 aa12.26□□□□□ -0.45
SREBF1-206ENST00000423161 FAM74A4Q5TZK3 123 aa12.26□□□□□ -0.45
SREBF1-206ENST00000423161 OR11H4Q8NGC9 324 aa12.26□□□□□ -0.45
SREBF1-206ENST00000423161 MAP1LC3BQ9GZQ8 125 aa12.26□□□□□ -0.45
SREBF1-206ENST00000423161 FAM30AQ9NZY2 134 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms