RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 HCP5Q6MZN7 132 aa3.81□□□□□ -1.8
ITGB1-205ENST00000423113 C9orf139Q6ZV77 190 aa3.81□□□□□ -1.8
ITGB1-205ENST00000423113 KLHL30-AS1Q8NEE0 82 aa3.81□□□□□ -1.8
ITGB1-205ENST00000423113 C10orf105Q8TEF2 133 aa3.81□□□□□ -1.8
ITGB1-205ENST00000423113 LINC01587Q99440 93 aa3.81□□□□□ -1.8
ITGB1-205ENST00000423113 WNT9BO14905 357 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 TIMM23O14925 209 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 MRPS12O15235 138 aaKnown RBP3.8□□□□□ -1.8
ITGB1-205ENST00000423113 IGLV2-14P01704 120 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 HLA-DMBP28068 263 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 KRTAP1-1Q07627 177 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 Q86TA4 180 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 WFDC11Q8NEX6 87 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 MRPL20Q9BYC9 149 aaKnown RBP3.8□□□□□ -1.8
ITGB1-205ENST00000423113 ZNF785A8K8V0 405 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 DEFB113Q30KQ7 82 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 ZMAT4Q9H898 229 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 MDFICQ9P1T7 246 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 A0A1B0GX51 115 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 C17orf100A8MU93 164 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 SRRM5B3KS81 715 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 TIMM8AO60220 97 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-205ENST00000423113 GATA1P15976 413 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-205ENST00000423113 CNTFRP26992 372 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 TMEM30BQ3MIR4 351 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 SPANXN1Q5VSR9 72 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 DEFB108BQ8NET1 73 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 LINC01560Q8TB33 94 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 DEFB104AQ8WTQ1 72 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 SPANXCQ9NY87 97 aa3.8□□□□□ -1.8
ITGB1-205ENST00000423113 HELZ2Q9BYK8 2649 aaKnown RBP3.8□□□□□ -1.8
ITGB1-205ENST00000423113 DOPEY2Q9Y3R5 2298 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 TACC2O95359 2948 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 TRBV7-3A0A075B6L6 115 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 WIPF1O43516 503 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 IGHV1-46P01743 117 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 CFC1P0CG37 223 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 CGB3P0DN86 165 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 CGB7P0DN87 165 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 LAGE3Q14657 143 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-205ENST00000423113 NDUFA11Q86Y39 141 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 C11orf44Q8N8P7 122 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 ZNF714Q96N38 554 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 CCL19Q99731 98 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 CUBNO60494 3623 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 IGHV3-64A0A075B6Q5 118 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 F8VRH5 84 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 PSPNO60542 156 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 MGPP08493 103 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 CRIP2P52943 208 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-205ENST00000423113 DLX6P56179 175 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 SYNJ2BPP57105 145 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 IL17RELQ6ZVW7 336 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 KIR2DL5BQ8NHK3 375 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 FXYD5Q96DB9 178 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 A0A096LNJ9 63 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 KLK9Q2XQG4 91 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 NSUN5P1Q3KNT7 163 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 C1orf195Q5TG92 126 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 Q6P435 159 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 FAM167A-AS1Q96KT0 104 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 JPT2Q9H910 190 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 KLK9Q9UKQ9 250 aa3.79□□□□□ -1.8
ITGB1-205ENST00000423113 SVEP1Q4LDE5 3571 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 COL12A1Q99715 3063 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 IGKV1OR2-108A0A075B7D4 117 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 FAM236DA0A1B0GTK5 79 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 CGB1A6NKQ9 187 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 F8WDY8 70 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 FAM236CP0DP71 79 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 S100A4P26447 101 aaKnown RBP3.78□□□□□ -1.8
ITGB1-205ENST00000423113 LINC00526Q96FQ7 95 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 HHLA3Q9XRX5 114 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 C19orf71A6NCJ1 209 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 LGALS9O00182 355 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 ATOX1O00244 68 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 COX7CP15954 63 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 NPC2P61916 151 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 HIST1H4AP62805 103 aaKnown RBP3.78□□□□□ -1.8
ITGB1-205ENST00000423113 CEMP1Q6PRD7 247 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-205ENST00000423113 PLEKHB2Q96CS7 222 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 ODF3Q96PU9 254 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 PRSS22Q9GZN4 317 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 CELSR1Q9NYQ6 3014 aa3.78□□□□□ -1.8
ITGB1-205ENST00000423113 TRBV10-2A0A0K0K1G8 114 aa3.78□□□□□ -1.81
ITGB1-205ENST00000423113 TMEM178BH3BS89 294 aa3.78□□□□□ -1.81
ITGB1-205ENST00000423113 PFN2P35080 140 aa3.78□□□□□ -1.81
ITGB1-205ENST00000423113 EEF1AKMT3Q96AZ1 226 aa3.78□□□□□ -1.81
ITGB1-205ENST00000423113 TMEM133Q9H2Q1 129 aa3.78□□□□□ -1.81
ITGB1-205ENST00000423113 ZNF580Q9UK33 172 aa3.78□□□□□ -1.81
ITGB1-205ENST00000423113 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-205ENST00000423113 SH2D1AO60880 128 aa3.77□□□□□ -1.81
ITGB1-205ENST00000423113 IGHG4P01861 327 aa3.77□□□□□ -1.81
ITGB1-205ENST00000423113 P0C879 139 aa3.77□□□□□ -1.81
ITGB1-205ENST00000423113 MALP21145 153 aa3.77□□□□□ -1.81
ITGB1-205ENST00000423113 PRCDQ00LT1 54 aa3.77□□□□□ -1.81
ITGB1-205ENST00000423113 C10orf55Q5SWW7 151 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms