RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ADCYAP1P18509 176 aa12.05□□□□□ -0.48
COL7A1-202ENST00000422991 ERVFC1-1P60608 527 aa12.05□□□□□ -0.48
COL7A1-202ENST00000422991 SCRT2Q9NQ03 307 aa12.05□□□□□ -0.48
COL7A1-202ENST00000422991 OSTCQ9NRP0 149 aa12.05□□□□□ -0.48
COL7A1-202ENST00000422991 XKRY2A2RUG3 117 aa12.04□□□□□ -0.48
COL7A1-202ENST00000422991 GATCO43716 136 aaKnown RBP12.04□□□□□ -0.48
COL7A1-202ENST00000422991 GZMBP10144 247 aa12.04□□□□□ -0.48
COL7A1-202ENST00000422991 RASL10AQ92737 203 aa12.04□□□□□ -0.48
COL7A1-202ENST00000422991 PTH2Q96A98 100 aa12.04□□□□□ -0.48
COL7A1-202ENST00000422991 C18orf15Q96N68 181 aa12.04□□□□□ -0.48
COL7A1-202ENST00000422991 DYNC2H1Q8NCM8 4307 aaKnown RBP12.03□□□□□ -0.48
COL7A1-202ENST00000422991 TENM2Q9NT68 2774 aa12.03□□□□□ -0.48
COL7A1-202ENST00000422991 SNAI2O43623 268 aa12.03□□□□□ -0.48
COL7A1-202ENST00000422991 IGLC6P0CF74 106 aa12.03□□□□□ -0.48
COL7A1-202ENST00000422991 CT83Q5H943 113 aa12.03□□□□□ -0.48
COL7A1-202ENST00000422991 SFRP2Q96HF1 295 aa12.03□□□□□ -0.48
COL7A1-202ENST00000422991 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
COL7A1-202ENST00000422991 TRGV2A0A075B6R0 118 aa12.02□□□□□ -0.49
COL7A1-202ENST00000422991 TRAV10A0A0B4J240 114 aa12.02□□□□□ -0.49
COL7A1-202ENST00000422991 F8W036 122 aa12.02□□□□□ -0.49
COL7A1-202ENST00000422991 OR5AL1P0C617 328 aa12.02□□□□□ -0.49
COL7A1-202ENST00000422991 PNRC1Q12796 327 aaPredicted RBP12.02□□□□□ -0.49
COL7A1-202ENST00000422991 ZNF876PQ49A33 203 aa12.02□□□□□ -0.49
COL7A1-202ENST00000422991 C15orf54Q8N8G6 183 aa12.02□□□□□ -0.49
COL7A1-202ENST00000422991 PHLDA1Q8WV24 401 aaPredicted RBP12.02□□□□□ -0.49
COL7A1-202ENST00000422991 NDUFAF3Q9BU61 184 aa12.02□□□□□ -0.49
COL7A1-202ENST00000422991 SEC11CQ9BY50 192 aa12.02□□□□□ -0.49
COL7A1-202ENST00000422991 NXPH4O95158 308 aa12.01□□□□□ -0.49
COL7A1-202ENST00000422991 ATP5G1P05496 136 aa12.01□□□□□ -0.49
COL7A1-202ENST00000422991 PIK3CD-AS1Q5SR53 167 aa12.01□□□□□ -0.49
COL7A1-202ENST00000422991 FER1L6-AS1Q8NA97 138 aa12.01□□□□□ -0.49
COL7A1-202ENST00000422991 PHLDA3Q9Y5J5 127 aa12.01□□□□□ -0.49
COL7A1-202ENST00000422991 V9GYV3 84 aa12.01□□□□□ -0.49
COL7A1-202ENST00000422991 NACAE9PAV3 2078 aa12.01□□□□□ -0.49
COL7A1-202ENST00000422991 DEFB131BA0A096LNP1 70 aa12□□□□□ -0.49
COL7A1-202ENST00000422991 A8MWL6 223 aa12□□□□□ -0.49
COL7A1-202ENST00000422991 CASC10Q5T4H9 136 aa12□□□□□ -0.49
COL7A1-202ENST00000422991 SYT8Q8NBV8 401 aa12□□□□□ -0.49
COL7A1-202ENST00000422991 OR10G8Q8NGN5 311 aa12□□□□□ -0.49
COL7A1-202ENST00000422991 OR10AG1Q8NH19 301 aa12□□□□□ -0.49
COL7A1-202ENST00000422991 STARD9Q9P2P6 4700 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 TRAV4A0A0B4J268 109 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 A0A1W2PPQ1 181 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 NUPR2A6NF83 97 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 HTN3P15516 51 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 CTRLP40313 264 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 C10orf91Q5T1B1 145 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 ZFAND6Q6FIF0 208 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 ZFP82Q8N141 532 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 POM121L12Q8N7R1 296 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 GTSF1Q8WW33 167 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 TPPP3Q9BW30 176 aa11.99□□□□□ -0.49
COL7A1-202ENST00000422991 M0R381 172 aa11.98□□□□□ -0.49
COL7A1-202ENST00000422991 CEMP1Q6PRD7 247 aaPredicted RBP11.98□□□□□ -0.49
COL7A1-202ENST00000422991 TSKUQ8WUA8 353 aa11.98□□□□□ -0.49
COL7A1-202ENST00000422991 CARHSP1Q9Y2V2 147 aaKnown RBP11.98□□□□□ -0.49
COL7A1-202ENST00000422991 MUC21A0A0G2JKD1 596 aa11.97□□□□□ -0.49
COL7A1-202ENST00000422991 MUC21A0A140T8X8 626 aa11.97□□□□□ -0.49
COL7A1-202ENST00000422991 F2Z2F3 143 aa11.97□□□□□ -0.49
COL7A1-202ENST00000422991 RS1O15537 224 aa11.97□□□□□ -0.49
COL7A1-202ENST00000422991 IGHV3-53P01767 116 aa11.97□□□□□ -0.49
COL7A1-202ENST00000422991 CFAP126Q5VTH2 177 aa11.97□□□□□ -0.49
COL7A1-202ENST00000422991 LYZL1Q6UWQ5 148 aa11.97□□□□□ -0.49
COL7A1-202ENST00000422991 ZNF479Q96JC4 524 aa11.97□□□□□ -0.49
COL7A1-202ENST00000422991 GFRA4Q9GZZ7 299 aa11.97□□□□□ -0.49
COL7A1-202ENST00000422991 FAM231BA6NCW3 169 aa11.96□□□□□ -0.49
COL7A1-202ENST00000422991 A8MWV9 139 aa11.96□□□□□ -0.49
COL7A1-202ENST00000422991 F5H768 121 aa11.96□□□□□ -0.49
COL7A1-202ENST00000422991 HOXA5P20719 270 aa11.96□□□□□ -0.49
COL7A1-202ENST00000422991 SPANXN1Q5VSR9 72 aa11.96□□□□□ -0.49
COL7A1-202ENST00000422991 OR4C5Q8NGB2 326 aa11.96□□□□□ -0.49
COL7A1-202ENST00000422991 CNFNQ9BYD5 112 aa11.96□□□□□ -0.49
COL7A1-202ENST00000422991 IGHV4-4A0A075B6R2 117 aa11.95□□□□□ -0.5
COL7A1-202ENST00000422991 CACNG7P62955 275 aa11.95□□□□□ -0.5
COL7A1-202ENST00000422991 RNF212Q495C1 297 aa11.95□□□□□ -0.5
COL7A1-202ENST00000422991 SLC7A5P1Q8MH63 180 aa11.95□□□□□ -0.5
COL7A1-202ENST00000422991 JPT2Q9H910 190 aa11.95□□□□□ -0.5
COL7A1-202ENST00000422991 HIGD1CA8MV81 97 aa11.94□□□□□ -0.5
COL7A1-202ENST00000422991 PPP1R2P9O14990 202 aa11.94□□□□□ -0.5
COL7A1-202ENST00000422991 FOXA3P55318 350 aaPredicted RBP11.94□□□□□ -0.5
COL7A1-202ENST00000422991 FHL2Q14192 279 aa11.94□□□□□ -0.5
COL7A1-202ENST00000422991 NDUFA5Q16718 116 aa11.94□□□□□ -0.5
COL7A1-202ENST00000422991 WDR73Q6P4I2 378 aa11.94□□□□□ -0.5
COL7A1-202ENST00000422991 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
COL7A1-202ENST00000422991 SMIM27A0A1W2PRY6 76 aa11.93□□□□□ -0.5
COL7A1-202ENST00000422991 MT-ND4LP03901 98 aa11.93□□□□□ -0.5
COL7A1-202ENST00000422991 UFSP1Q6NVU6 142 aa11.93□□□□□ -0.5
COL7A1-202ENST00000422991 FAM210BQ96KR6 192 aa11.93□□□□□ -0.5
COL7A1-202ENST00000422991 PGLYRP4Q96LB8 373 aa11.93□□□□□ -0.5
COL7A1-202ENST00000422991 RYR3Q15413 4870 aa11.92□□□□□ -0.5
COL7A1-202ENST00000422991 TRGV4A0A0C4DH28 118 aa11.92□□□□□ -0.5
COL7A1-202ENST00000422991 CIDEAO60543 219 aa11.92□□□□□ -0.5
COL7A1-202ENST00000422991 SSTP61278 116 aa11.92□□□□□ -0.5
COL7A1-202ENST00000422991 TMEM88Q6PEY1 159 aa11.92□□□□□ -0.5
COL7A1-202ENST00000422991 ZFP2Q6ZN57 461 aa11.92□□□□□ -0.5
COL7A1-202ENST00000422991 ANAPC16Q96DE5 110 aa11.92□□□□□ -0.5
COL7A1-202ENST00000422991 AP1S3Q96PC3 154 aa11.92□□□□□ -0.5
COL7A1-202ENST00000422991 SAMD10Q9BYL1 202 aa11.92□□□□□ -0.5
COL7A1-202ENST00000422991 MSRB1Q9NZV6 116 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms