RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 RAB2AP61019 212 aa7.46□□□□□ -1.22
UFD1-203ENST00000421968 CLLU1Q5K131 121 aa7.46□□□□□ -1.22
UFD1-203ENST00000421968 AKR1C8PQ5T2L2 129 aa7.46□□□□□ -1.22
UFD1-203ENST00000421968 SDIM1Q6ZPB5 146 aa7.46□□□□□ -1.22
UFD1-203ENST00000421968 Q6ZRG5 221 aa7.46□□□□□ -1.22
UFD1-203ENST00000421968 BPIFCQ8NFQ6 507 aa7.46□□□□□ -1.22
UFD1-203ENST00000421968 ODF3Q96PU9 254 aa7.46□□□□□ -1.22
UFD1-203ENST00000421968 SMCO3A2RU48 225 aa7.45□□□□□ -1.22
UFD1-203ENST00000421968 H3BRN7 92 aa7.45□□□□□ -1.22
UFD1-203ENST00000421968 AGPAT2O15120 278 aa7.45□□□□□ -1.22
UFD1-203ENST00000421968 PLP1P60201 277 aa7.45□□□□□ -1.22
UFD1-203ENST00000421968 CIRBPQ14011 172 aaKnown RBP7.45□□□□□ -1.22
UFD1-203ENST00000421968 OR1L4Q8NGR5 311 aa7.45□□□□□ -1.22
UFD1-203ENST00000421968 TMED6Q8WW62 240 aa7.45□□□□□ -1.22
UFD1-203ENST00000421968 PFDN5Q99471 154 aa7.45□□□□□ -1.22
UFD1-203ENST00000421968 MED9Q9NWA0 146 aa7.45□□□□□ -1.22
UFD1-203ENST00000421968 TRAV1-1A0A0B4J248 108 aa7.44□□□□□ -1.22
UFD1-203ENST00000421968 H7C1H1 209 aa7.44□□□□□ -1.22
UFD1-203ENST00000421968 BTN1A1Q13410 526 aa7.44□□□□□ -1.22
UFD1-203ENST00000421968 DGAT2L7PQ6IED9 249 aa7.44□□□□□ -1.22
UFD1-203ENST00000421968 ALKAL2Q6UX46 152 aa7.44□□□□□ -1.22
UFD1-203ENST00000421968 CYP2G1PQ6ZSU1 146 aa7.44□□□□□ -1.22
UFD1-203ENST00000421968 MGST2Q99735 147 aa7.44□□□□□ -1.22
UFD1-203ENST00000421968 TRAV26-2A0A0B4J265 109 aa7.43□□□□□ -1.22
UFD1-203ENST00000421968 NDUFS6O75380 124 aaKnown RBP7.43□□□□□ -1.22
UFD1-203ENST00000421968 RNASE4P34096 147 aaKnown RBP7.43□□□□□ -1.22
UFD1-203ENST00000421968 TAGLN2P37802 199 aaKnown RBP7.43□□□□□ -1.22
UFD1-203ENST00000421968 LYPD6BQ8NI32 183 aa7.43□□□□□ -1.22
UFD1-203ENST00000421968 GTSF1Q8WW33 167 aa7.43□□□□□ -1.22
UFD1-203ENST00000421968 RNF185Q96GF1 192 aa7.43□□□□□ -1.22
UFD1-203ENST00000421968 SHANK2-AS3Q9BTD1 123 aa7.43□□□□□ -1.22
UFD1-203ENST00000421968 ACTR3CQ9C0K3 210 aaPredicted RBP7.43□□□□□ -1.22
UFD1-203ENST00000421968 GTSF1LQ9H1H1 148 aa7.43□□□□□ -1.22
UFD1-203ENST00000421968 ZNF331Q9NQX6 463 aaPredicted RBP7.43□□□□□ -1.22
UFD1-203ENST00000421968 SLC39A9Q9NUM3 307 aa7.43□□□□□ -1.22
UFD1-203ENST00000421968 PXMP4Q9Y6I8 212 aa7.43□□□□□ -1.22
UFD1-203ENST00000421968 TRAV4A0A0B4J268 109 aa7.42□□□□□ -1.22
UFD1-203ENST00000421968 IGHV3-16A0A0C4DH30 117 aa7.42□□□□□ -1.22
UFD1-203ENST00000421968 A0A1W2PPV4 95 aa7.42□□□□□ -1.22
UFD1-203ENST00000421968 FAM231BA6NCW3 169 aa7.42□□□□□ -1.22
UFD1-203ENST00000421968 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
UFD1-203ENST00000421968 SNRPCP09234 159 aaKnown RBP7.42□□□□□ -1.22
UFD1-203ENST00000421968 OR4C5Q8NGB2 326 aa7.42□□□□□ -1.22
UFD1-203ENST00000421968 MBD3L1Q8WWY6 194 aa7.42□□□□□ -1.22
UFD1-203ENST00000421968 SMDT1Q9H4I9 107 aa7.42□□□□□ -1.22
UFD1-203ENST00000421968 IGHV1OR15-1A0A075B7D0 117 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 CTXND1A0A1B0GTU2 59 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 LINC00862A6NCI5 91 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 USP17L23D6RBM5 183 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 PRSS1P07477 247 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 NMBP08949 121 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 LINC00869P0C866 280 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 TAS2R45P59539 299 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 SRSF3P84103 164 aaKnown RBP7.41□□□□□ -1.22
UFD1-203ENST00000421968 LCN15Q6UWW0 184 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 TMEM182Q6ZP80 229 aaPredicted RBP7.41□□□□□ -1.22
UFD1-203ENST00000421968 OR10G9Q8NGN4 311 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 OR10G7Q8NGN6 311 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 SUN5Q8TC36 379 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 RASL10AQ92737 203 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 UBE2WQ96B02 151 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 SLC50A1Q9BRV3 221 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 SH3BGRL3Q9H299 93 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 HIGD1AQ9Y241 93 aa7.41□□□□□ -1.22
UFD1-203ENST00000421968 RAB19A4D1S5 217 aa7.4□□□□□ -1.22
UFD1-203ENST00000421968 KLLNB2CW77 178 aa7.4□□□□□ -1.22
UFD1-203ENST00000421968 HYPMO75409 117 aa7.4□□□□□ -1.22
UFD1-203ENST00000421968 H2AFB1P0C5Y9 115 aa7.4□□□□□ -1.22
UFD1-203ENST00000421968 OR10J4P0C629 311 aa7.4□□□□□ -1.22
UFD1-203ENST00000421968 CHTF8P0CG12 524 aa7.4□□□□□ -1.22
UFD1-203ENST00000421968 GATA1P15976 413 aaPredicted RBP7.4□□□□□ -1.22
UFD1-203ENST00000421968 RPL19P84098 196 aaKnown RBP7.4□□□□□ -1.22
UFD1-203ENST00000421968 KLK12Q9UKR0 248 aa7.4□□□□□ -1.22
UFD1-203ENST00000421968 ARL2-SNX15V9GYD0 113 aa7.4□□□□□ -1.22
UFD1-203ENST00000421968 COX7A2P2O60397 106 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 CXorf1O96002 111 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 OR5G3P0C626 314 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 CDC34P49427 236 aaPredicted RBP7.39□□□□□ -1.23
UFD1-203ENST00000421968 C10orf113Q5VZT2 155 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 MIC13Q5XKP0 118 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 PQLC2Q6ZP29 291 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 Q6ZQT7 251 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 FAM213BQ8TBF2 198 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 PRADC1Q9BSG0 188 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 OR51M1Q9H341 326 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 PLAC8Q9NZF1 115 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 URGCP-MRPS24S4R325 110 aa7.39□□□□□ -1.23
UFD1-203ENST00000421968 IFNA1P01562 189 aa7.38□□□□□ -1.23
UFD1-203ENST00000421968 GPX1P07203 203 aa7.38□□□□□ -1.23
UFD1-203ENST00000421968 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
UFD1-203ENST00000421968 KHDC3LQ587J8 217 aa7.38□□□□□ -1.23
UFD1-203ENST00000421968 UQCC3Q6UW78 93 aa7.38□□□□□ -1.23
UFD1-203ENST00000421968 SLC25A29Q8N8R3 303 aa7.38□□□□□ -1.23
UFD1-203ENST00000421968 SPACA4Q8TDM5 124 aa7.38□□□□□ -1.23
UFD1-203ENST00000421968 NKX6-2Q9C056 277 aaPredicted RBP7.38□□□□□ -1.23
UFD1-203ENST00000421968 H3BTX0 84 aa7.37□□□□□ -1.23
UFD1-203ENST00000421968 SLC17A3O00476 420 aa7.37□□□□□ -1.23
UFD1-203ENST00000421968 STAG3L2P0CL84 134 aa7.37□□□□□ -1.23
UFD1-203ENST00000421968 STAG3L3P0CL85 134 aa7.37□□□□□ -1.23
UFD1-203ENST00000421968 ERCC8Q13216 396 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms