RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 METTL26Q96S19 204 aa16.16■□□□□ 0.18
USP48-205ENST00000421625 MRPL53Q96EL3 112 aaKnown RBP16.15■□□□□ 0.18
USP48-205ENST00000421625 TIMD4Q96H15 378 aa16.15■□□□□ 0.18
USP48-205ENST00000421625 A6NJY4 79 aa16.15■□□□□ 0.18
USP48-205ENST00000421625 MT-ATP8P03928 68 aa16.15■□□□□ 0.18
USP48-205ENST00000421625 ATP6V0E2Q8NHE4 81 aa16.15■□□□□ 0.18
USP48-205ENST00000421625 DEFB104AQ8WTQ1 72 aa16.15■□□□□ 0.18
USP48-205ENST00000421625 C16orf92Q96LL3 132 aa16.15■□□□□ 0.18
USP48-205ENST00000421625 HRNRQ86YZ3 2850 aaPredicted RBP16.14■□□□□ 0.18
USP48-205ENST00000421625 FAM90A27PA6NNH2 459 aa16.14■□□□□ 0.17
USP48-205ENST00000421625 EMP1P54849 157 aa16.14■□□□□ 0.17
USP48-205ENST00000421625 DEFB1P60022 68 aa16.14■□□□□ 0.17
USP48-205ENST00000421625 SPINK8P0C7L1 97 aa16.14■□□□□ 0.17
USP48-205ENST00000421625 GEMIN7Q9H840 131 aaKnown RBP16.14■□□□□ 0.17
USP48-205ENST00000421625 CD7P09564 240 aa16.13■□□□□ 0.17
USP48-205ENST00000421625 DPH3P1Q9H4G8 78 aa16.13■□□□□ 0.17
USP48-205ENST00000421625 CARD19Q96LW7 228 aa16.13■□□□□ 0.17
USP48-205ENST00000421625 COL12A1Q99715 3063 aa16.12■□□□□ 0.17
USP48-205ENST00000421625 DUSP14O95147 198 aaKnown RBP16.12■□□□□ 0.17
USP48-205ENST00000421625 S100A4P26447 101 aaKnown RBP16.12■□□□□ 0.17
USP48-205ENST00000421625 UBE2D3P61077 147 aa16.12■□□□□ 0.17
USP48-205ENST00000421625 UBE2D2P62837 147 aa16.12■□□□□ 0.17
USP48-205ENST00000421625 CRYGDP07320 174 aa16.12■□□□□ 0.17
USP48-205ENST00000421625 XGP55808 180 aa16.12■□□□□ 0.17
USP48-205ENST00000421625 OOSP1A8MZH6 123 aa16.11■□□□□ 0.17
USP48-205ENST00000421625 ZFP36P26651 326 aaKnown RBP16.11■□□□□ 0.17
USP48-205ENST00000421625 C11orf86A6NJI1 115 aa16.11■□□□□ 0.17
USP48-205ENST00000421625 ZFAND2AQ8N6M9 145 aa16.11■□□□□ 0.17
USP48-205ENST00000421625 PHLDA3Q9Y5J5 127 aa16.11■□□□□ 0.17
USP48-205ENST00000421625 TGFAP01135 160 aa16.1■□□□□ 0.17
USP48-205ENST00000421625 GATA3P23771 443 aa16.1■□□□□ 0.17
USP48-205ENST00000421625 MINOS1Q5TGZ0 78 aa16.1■□□□□ 0.17
USP48-205ENST00000421625 MINOS1-NBL1R4GNA1 71 aa16.1■□□□□ 0.17
USP48-205ENST00000421625 U3KQE9 123 aa16.1■□□□□ 0.17
USP48-205ENST00000421625 ZFHX3Q15911 3703 aa16.1■□□□□ 0.17
USP48-205ENST00000421625 EEF1AKMT3Q96AZ1 226 aa16.1■□□□□ 0.17
USP48-205ENST00000421625 SPTAN1Q13813 2472 aaKnown RBP16.1■□□□□ 0.17
USP48-205ENST00000421625 CENPVL3A0A0U1RRI6 287 aa16.09■□□□□ 0.17
USP48-205ENST00000421625 Q6ZUT4 128 aa16.09■□□□□ 0.17
USP48-205ENST00000421625 NDUFA11Q86Y39 141 aa16.09■□□□□ 0.17
USP48-205ENST00000421625 TCL1BO95988 128 aa16.09■□□□□ 0.17
USP48-205ENST00000421625 TSHBP01222 138 aa16.09■□□□□ 0.17
USP48-205ENST00000421625 ANXA2RQ3ZCQ2 193 aa16.09■□□□□ 0.17
USP48-205ENST00000421625 IGLV4-69A0A075B6H9 119 aa16.09■□□□□ 0.17
USP48-205ENST00000421625 ASIPP42127 132 aa16.09■□□□□ 0.17
USP48-205ENST00000421625 Q6ZS46 218 aa16.09■□□□□ 0.17
USP48-205ENST00000421625 ITLN2Q8WWU7 325 aaPredicted RBP16.09■□□□□ 0.17
USP48-205ENST00000421625 A0A0J9YY99 117 aa16.08■□□□□ 0.16
USP48-205ENST00000421625 GPHB5Q86YW7 130 aa16.08■□□□□ 0.16
USP48-205ENST00000421625 GNRH2O43555 120 aa16.07■□□□□ 0.16
USP48-205ENST00000421625 KLK9Q2XQG4 91 aa16.07■□□□□ 0.16
USP48-205ENST00000421625 KLK9Q9UKQ9 250 aa16.07■□□□□ 0.16
USP48-205ENST00000421625 TRAV21A0A0B4J279 112 aa16.06■□□□□ 0.16
USP48-205ENST00000421625 TSPEAR-AS2P59090 65 aa16.06■□□□□ 0.16
USP48-205ENST00000421625 PPDPFLQ8WWR9 84 aa16.06■□□□□ 0.16
USP48-205ENST00000421625 AJUBAQ96IF1 538 aa16.06■□□□□ 0.16
USP48-205ENST00000421625 CDSNQ15517 529 aa16.06■□□□□ 0.16
USP48-205ENST00000421625 C1orf122Q6ZSJ8 110 aa16.06■□□□□ 0.16
USP48-205ENST00000421625 TEN1Q86WV5 123 aa16.06■□□□□ 0.16
USP48-205ENST00000421625 C9orf139Q6ZV77 190 aa16.05■□□□□ 0.16
USP48-205ENST00000421625 TP53TG1Q9Y2A0 90 aa16.05■□□□□ 0.16
USP48-205ENST00000421625 TRBV7-1A0A0A6YYK4 115 aa16.05■□□□□ 0.16
USP48-205ENST00000421625 CFC1BP0CG36 223 aa16.05■□□□□ 0.16
USP48-205ENST00000421625 CFC1P0CG37 223 aa16.05■□□□□ 0.16
USP48-205ENST00000421625 RNASE4P34096 147 aaKnown RBP16.05■□□□□ 0.16
USP48-205ENST00000421625 LENEPQ9Y5L5 61 aa16.05■□□□□ 0.16
USP48-205ENST00000421625 PKD1L2Q7Z442 2459 aa16.05■□□□□ 0.16
USP48-205ENST00000421625 SIRPDQ9H106 197 aa16.04■□□□□ 0.16
USP48-205ENST00000421625 AKAP6Q13023 2319 aa16.04■□□□□ 0.16
USP48-205ENST00000421625 HIVEP3Q5T1R4 2406 aa16.04■□□□□ 0.16
USP48-205ENST00000421625 CCL21O00585 134 aa16.04■□□□□ 0.16
USP48-205ENST00000421625 RPL39P62891 51 aaKnown RBP16.04■□□□□ 0.16
USP48-205ENST00000421625 LINC00527Q9UJ94 153 aa16.04■□□□□ 0.16
USP48-205ENST00000421625 F6UB75 175 aa16.04■□□□□ 0.16
USP48-205ENST00000421625 LY6DQ14210 128 aa16.04■□□□□ 0.16
USP48-205ENST00000421625 LINC00477Q96M19 166 aa16.04■□□□□ 0.16
USP48-205ENST00000421625 KIR2DL4Q99706 377 aa16.04■□□□□ 0.16
USP48-205ENST00000421625 IGHV3-30P01768 117 aa16.03■□□□□ 0.16
USP48-205ENST00000421625 IGHV3-30-5P0DP03 117 aa16.03■□□□□ 0.16
USP48-205ENST00000421625 RNASE3P12724 160 aaKnown RBP16.03■□□□□ 0.16
USP48-205ENST00000421625 ARL3P36405 182 aa16.03■□□□□ 0.16
USP48-205ENST00000421625 UCNP55089 124 aa16.03■□□□□ 0.16
USP48-205ENST00000421625 OR10J6PQ8NGY7 276 aa16.03■□□□□ 0.16
USP48-205ENST00000421625 SS18L2Q9UHA2 77 aa16.03■□□□□ 0.16
USP48-205ENST00000421625 MUC4Q99102 2169 aa16.03■□□□□ 0.16
USP48-205ENST00000421625 HERVK_113P61574 105 aa16.02■□□□□ 0.15
USP48-205ENST00000421625 LYRM7Q5U5X0 104 aa16.02■□□□□ 0.15
USP48-205ENST00000421625 UNQ9165/PRO28630Q6UXU0 137 aa16.02■□□□□ 0.15
USP48-205ENST00000421625 IGIPA6NJ69 53 aa16.01■□□□□ 0.15
USP48-205ENST00000421625 SAA4P35542 130 aa16.01■□□□□ 0.15
USP48-205ENST00000421625 ANKRD29Q8N6D5 301 aa16.01■□□□□ 0.15
USP48-205ENST00000421625 CFAP161Q6P656 301 aa16.01■□□□□ 0.15
USP48-205ENST00000421625 JPT2Q9H910 190 aa16.01■□□□□ 0.15
USP48-205ENST00000421625 A8MWV9 139 aa16■□□□□ 0.15
USP48-205ENST00000421625 TMEM170BQ5T4T1 132 aa16■□□□□ 0.15
USP48-205ENST00000421625 KLRB1Q12918 225 aa16■□□□□ 0.15
USP48-205ENST00000421625 PMVKQ15126 192 aa16■□□□□ 0.15
USP48-205ENST00000421625 C11orf71Q6IPW1 123 aa16■□□□□ 0.15
USP48-205ENST00000421625 SBSPONQ8IVN8 264 aa16■□□□□ 0.15
USP48-205ENST00000421625 TRBV12-3P01733 135 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms