RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 FCER1GP30273 86 aa13.86□□□□□ -0.19
PPFIA3-202ENST00000421230 ZNF80P51504 273 aaPredicted RBP13.86□□□□□ -0.19
PPFIA3-202ENST00000421230 PHLDA1Q8WV24 401 aaPredicted RBP13.86□□□□□ -0.19
PPFIA3-202ENST00000421230 CCDC140Q96MF4 163 aa13.86□□□□□ -0.19
PPFIA3-202ENST00000421230 CNFNQ9BYD5 112 aa13.86□□□□□ -0.19
PPFIA3-202ENST00000421230 MAP1LC3AQ9H492 121 aa13.86□□□□□ -0.19
PPFIA3-202ENST00000421230 ZNF580Q9UK33 172 aa13.86□□□□□ -0.19
PPFIA3-202ENST00000421230 CLEC3BP05452 202 aa13.85□□□□□ -0.19
PPFIA3-202ENST00000421230 CLEC19AQ6UXS0 136 aa13.85□□□□□ -0.19
PPFIA3-202ENST00000421230 C18orf15Q96N68 181 aa13.85□□□□□ -0.19
PPFIA3-202ENST00000421230 FAM223BA6NKX1 122 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 CTSGP08311 255 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 EVI2AP22794 236 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 GCSHP23434 173 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 TM4SF20Q53R12 229 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 FAM223AQ8IWN6 122 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 Q8N2B8 174 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 EEF1AKMT3Q96AZ1 226 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 IGHV3-35A0A0C4DH35 117 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 H3BUA1 57 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 IGHV3-11P01762 117 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 LEPP41159 167 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 RAB9AP51151 201 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 Q6ZSV7 163 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 CHAC1Q9BUX1 264 aa13.84□□□□□ -0.19
PPFIA3-202ENST00000421230 IGHG4P01861 327 aa13.83□□□□□ -0.2
PPFIA3-202ENST00000421230 HILS1P60008 231 aa13.83□□□□□ -0.2
PPFIA3-202ENST00000421230 LINC01559Q495D7 138 aa13.83□□□□□ -0.2
PPFIA3-202ENST00000421230 MSRB1Q9NZV6 116 aa13.83□□□□□ -0.2
PPFIA3-202ENST00000421230 GAS8-AS1O95177 125 aa13.83□□□□□ -0.2
PPFIA3-202ENST00000421230 TM2D2Q9BX73 214 aa13.83□□□□□ -0.2
PPFIA3-202ENST00000421230 NXT2Q9NPJ8 142 aaKnown RBP13.83□□□□□ -0.2
PPFIA3-202ENST00000421230 BRI3O95415 125 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 RNASE1P07998 156 aaKnown RBP13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 PSMB8P28062 276 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 VGLL1Q99990 258 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 TTTY13Q9BZ97 58 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 TRBV7-1A0A0A6YYK4 115 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 TNFRSF6BO95407 300 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 IGKCP01834 107 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 HLA-DRB4P13762 266 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 RPL7P18124 248 aaKnown RBP13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 Q8TAT8 98 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 SMPXQ9UHP9 88 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 HLA-DRB4X5D2U9 266 aa13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 SETD2Q9BYW2 2564 aaPredicted RBP13.82□□□□□ -0.2
PPFIA3-202ENST00000421230 NIPBLQ6KC79 2804 aaeCLIP13.81□□□□□ -0.2
PPFIA3-202ENST00000421230 TRBV25-1A0A075B6N4 114 aa13.81□□□□□ -0.2
PPFIA3-202ENST00000421230 TEX48A0A1B0GUV7 120 aa13.81□□□□□ -0.2
PPFIA3-202ENST00000421230 TRBV12-3P01733 135 aa13.8□□□□□ -0.2
PPFIA3-202ENST00000421230 USMG5Q96IX5 58 aa13.8□□□□□ -0.2
PPFIA3-202ENST00000421230 IGHV3OR16-8A0A075B7F1 116 aa13.8□□□□□ -0.2
PPFIA3-202ENST00000421230 PRSS1P07477 247 aa13.8□□□□□ -0.2
PPFIA3-202ENST00000421230 CEND1Q8N111 149 aa13.8□□□□□ -0.2
PPFIA3-202ENST00000421230 SMAD5-AS1Q9Y6J3 95 aa13.8□□□□□ -0.2
PPFIA3-202ENST00000421230 K7ERJ3 54 aa13.79□□□□□ -0.2
PPFIA3-202ENST00000421230 ATP5LO75964 103 aa13.79□□□□□ -0.2
PPFIA3-202ENST00000421230 RPL24P83731 157 aaKnown RBP13.79□□□□□ -0.2
PPFIA3-202ENST00000421230 E9PLD3 99 aa13.79□□□□□ -0.2
PPFIA3-202ENST00000421230 DPM2O94777 84 aa13.79□□□□□ -0.2
PPFIA3-202ENST00000421230 IGLV2-18A0A075B6J9 118 aa13.78□□□□□ -0.2
PPFIA3-202ENST00000421230 ORM1P02763 201 aa13.78□□□□□ -0.2
PPFIA3-202ENST00000421230 GTSCR1Q86UQ5 136 aa13.78□□□□□ -0.2
PPFIA3-202ENST00000421230 WFDC12Q8WWY7 111 aa13.78□□□□□ -0.2
PPFIA3-202ENST00000421230 FABP5P3A8MUU1 101 aa13.78□□□□□ -0.2
PPFIA3-202ENST00000421230 CRLF1O75462 422 aa13.78□□□□□ -0.2
PPFIA3-202ENST00000421230 SCGB2A1O75556 95 aa13.78□□□□□ -0.2
PPFIA3-202ENST00000421230 SAMD13Q5VXD3 122 aa13.78□□□□□ -0.2
PPFIA3-202ENST00000421230 Q8N8P6 123 aa13.78□□□□□ -0.2
PPFIA3-202ENST00000421230 TMEM158Q8WZ71 300 aa13.78□□□□□ -0.2
PPFIA3-202ENST00000421230 TMEM89A2RUT3 159 aa13.76□□□□□ -0.21
PPFIA3-202ENST00000421230 SCGB1A1P11684 91 aa13.76□□□□□ -0.21
PPFIA3-202ENST00000421230 GATA1P15976 413 aaPredicted RBP13.76□□□□□ -0.21
PPFIA3-202ENST00000421230 HLA-DMBP28068 263 aa13.76□□□□□ -0.21
PPFIA3-202ENST00000421230 ARL3P36405 182 aa13.76□□□□□ -0.21
PPFIA3-202ENST00000421230 ZC2HC1BQ5TFG8 222 aa13.76□□□□□ -0.21
PPFIA3-202ENST00000421230 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
PPFIA3-202ENST00000421230 NHP2Q9NX24 153 aaKnown RBP13.76□□□□□ -0.21
PPFIA3-202ENST00000421230 IGFL4Q6B9Z1 124 aa13.76□□□□□ -0.21
PPFIA3-202ENST00000421230 TEP1Q99973 2627 aaKnown RBP13.76□□□□□ -0.21
PPFIA3-202ENST00000421230 IGLL5B9A064 214 aa13.75□□□□□ -0.21
PPFIA3-202ENST00000421230 ELANEP08246 267 aa13.75□□□□□ -0.21
PPFIA3-202ENST00000421230 TAL2Q16559 108 aa13.75□□□□□ -0.21
PPFIA3-202ENST00000421230 FOXI2Q6ZQN5 318 aa13.75□□□□□ -0.21
PPFIA3-202ENST00000421230 F8W1H4 67 aa13.75□□□□□ -0.21
PPFIA3-202ENST00000421230 SPANXB1Q9NS25 103 aaPredicted RBP13.75□□□□□ -0.21
PPFIA3-202ENST00000421230 MAPKAPK5-AS1Q8N8E1 139 aa13.74□□□□□ -0.21
PPFIA3-202ENST00000421230 LINC01006Q8NI28 216 aa13.74□□□□□ -0.21
PPFIA3-202ENST00000421230 ATP6V0BQ99437 205 aa13.74□□□□□ -0.21
PPFIA3-202ENST00000421230 ZFAND3Q9H8U3 227 aa13.74□□□□□ -0.21
PPFIA3-202ENST00000421230 AZU1P20160 251 aa13.73□□□□□ -0.21
PPFIA3-202ENST00000421230 TCTEX1D4Q5JR98 221 aa13.73□□□□□ -0.21
PPFIA3-202ENST00000421230 SIGMAR1Q99720 223 aa13.73□□□□□ -0.21
PPFIA3-202ENST00000421230 ERCC8Q13216 396 aa13.72□□□□□ -0.21
PPFIA3-202ENST00000421230 WFDC2Q14508 124 aa13.72□□□□□ -0.21
PPFIA3-202ENST00000421230 RNF152Q8N8N0 203 aa13.72□□□□□ -0.21
PPFIA3-202ENST00000421230 MYOZ3Q8TDC0 251 aa13.72□□□□□ -0.21
PPFIA3-202ENST00000421230 MRPL35Q9NZE8 188 aaKnown RBP13.72□□□□□ -0.21
PPFIA3-202ENST00000421230 ZNF207O43670 478 aaKnown RBP13.72□□□□□ -0.21
PPFIA3-202ENST00000421230 C12orf74Q32Q52 190 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms