RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 C10orf126Q8N4M7 172 aa13.39□□□□□ -0.27
PMS1-206ENST00000418224 LINC01560Q8TB33 94 aa13.39□□□□□ -0.27
PMS1-206ENST00000418224 SMIM2Q9BVW6 85 aa13.39□□□□□ -0.27
PMS1-206ENST00000418224 BAALCQ8WXS3 180 aa13.39□□□□□ -0.27
PMS1-206ENST00000418224 C15orf53Q8NAA6 179 aa13.38□□□□□ -0.27
PMS1-206ENST00000418224 TMEM190Q8WZ59 177 aa13.38□□□□□ -0.27
PMS1-206ENST00000418224 ANKHD1Q8IWZ3 2542 aaKnown RBP13.38□□□□□ -0.27
PMS1-206ENST00000418224 ASIPP42127 132 aa13.38□□□□□ -0.27
PMS1-206ENST00000418224 Q8N1Y9 231 aa13.38□□□□□ -0.27
PMS1-206ENST00000418224 SMAD5-AS1Q9Y6J3 95 aa13.38□□□□□ -0.27
PMS1-206ENST00000418224 A0A0J9YY99 117 aa13.37□□□□□ -0.27
PMS1-206ENST00000418224 IGF2-ASQ6U949 168 aa13.37□□□□□ -0.27
PMS1-206ENST00000418224 PRO1854Q9UHT4 67 aa13.37□□□□□ -0.27
PMS1-206ENST00000418224 IGLV11-55A0A075B6I3 123 aa13.37□□□□□ -0.27
PMS1-206ENST00000418224 NDPQ00604 133 aa13.37□□□□□ -0.27
PMS1-206ENST00000418224 BEX4Q9NWD9 120 aaPredicted RBP13.37□□□□□ -0.27
PMS1-206ENST00000418224 TEX49A0A1B0GTD5 131 aa13.37□□□□□ -0.27
PMS1-206ENST00000418224 COX6B1P14854 86 aa13.37□□□□□ -0.27
PMS1-206ENST00000418224 C2orf66Q6UXQ4 117 aa13.37□□□□□ -0.27
PMS1-206ENST00000418224 F8W735 103 aaPredicted RBP13.36□□□□□ -0.27
PMS1-206ENST00000418224 IGHV4-39P01824 125 aa13.36□□□□□ -0.27
PMS1-206ENST00000418224 ZNF672Q499Z4 452 aaPredicted RBP13.36□□□□□ -0.27
PMS1-206ENST00000418224 PSMG3-AS1Q96PY0 264 aa13.36□□□□□ -0.27
PMS1-206ENST00000418224 TNFRSF18Q9Y5U5 241 aa13.36□□□□□ -0.27
PMS1-206ENST00000418224 DCHS2Q6V1P9 2916 aa13.36□□□□□ -0.27
PMS1-206ENST00000418224 TLN1Q9Y490 2541 aaKnown RBP13.36□□□□□ -0.27
PMS1-206ENST00000418224 IGHV3-66A0A0C4DH42 116 aa13.35□□□□□ -0.27
PMS1-206ENST00000418224 TOMM6Q96B49 74 aa13.35□□□□□ -0.27
PMS1-206ENST00000418224 RPL39LQ96EH5 51 aaKnown RBP13.35□□□□□ -0.27
PMS1-206ENST00000418224 IGHV3OR16-13A0A075B7E8 117 aa13.35□□□□□ -0.27
PMS1-206ENST00000418224 IGHV3-74A0A0B4J1X5 117 aa13.35□□□□□ -0.27
PMS1-206ENST00000418224 J3KRW8 73 aa13.35□□□□□ -0.27
PMS1-206ENST00000418224 ORMDL2Q53FV1 153 aa13.35□□□□□ -0.27
PMS1-206ENST00000418224 PTPRZ1P23471 2315 aaPredicted RBP13.35□□□□□ -0.27
PMS1-206ENST00000418224 TRAV8-4A0A0B4J246 113 aa13.34□□□□□ -0.27
PMS1-206ENST00000418224 CENPVL3A0A0U1RRI6 287 aa13.34□□□□□ -0.27
PMS1-206ENST00000418224 ID1P41134 155 aa13.34□□□□□ -0.27
PMS1-206ENST00000418224 Q1RN00 199 aa13.34□□□□□ -0.27
PMS1-206ENST00000418224 C11orf86A6NJI1 115 aa13.34□□□□□ -0.27
PMS1-206ENST00000418224 IGHV3-30P01768 117 aa13.34□□□□□ -0.27
PMS1-206ENST00000418224 IGHV3-30-5P0DP03 117 aa13.34□□□□□ -0.27
PMS1-206ENST00000418224 Q8NA96 180 aa13.34□□□□□ -0.27
PMS1-206ENST00000418224 M0R381 172 aa13.33□□□□□ -0.28
PMS1-206ENST00000418224 SUMO2P61956 95 aaKnown RBP13.33□□□□□ -0.28
PMS1-206ENST00000418224 ODF3Q96PU9 254 aa13.33□□□□□ -0.28
PMS1-206ENST00000418224 PPDPFQ9H3Y8 114 aa13.33□□□□□ -0.28
PMS1-206ENST00000418224 ZNF292O60281 2723 aa13.33□□□□□ -0.28
PMS1-206ENST00000418224 SRSF2Q01130 221 aaKnown RBP13.33□□□□□ -0.28
PMS1-206ENST00000418224 NPBQ8NG41 125 aa13.33□□□□□ -0.28
PMS1-206ENST00000418224 IGHV7-4-1A0A0J9YVY3 117 aa13.32□□□□□ -0.28
PMS1-206ENST00000418224 CTSGP08311 255 aa13.32□□□□□ -0.28
PMS1-206ENST00000418224 TMEM170BQ5T4T1 132 aa13.32□□□□□ -0.28
PMS1-206ENST00000418224 CHCHD5Q9BSY4 110 aa13.32□□□□□ -0.28
PMS1-206ENST00000418224 A4D1N5 150 aa13.31□□□□□ -0.28
PMS1-206ENST00000418224 ELANEP08246 267 aa13.31□□□□□ -0.28
PMS1-206ENST00000418224 TSPEAR-AS2P59090 65 aa13.31□□□□□ -0.28
PMS1-206ENST00000418224 DUSP14O95147 198 aaKnown RBP13.31□□□□□ -0.28
PMS1-206ENST00000418224 MGPP08493 103 aa13.31□□□□□ -0.28
PMS1-206ENST00000418224 GRNP28799 593 aaKnown RBP13.31□□□□□ -0.28
PMS1-206ENST00000418224 TCF15Q12870 199 aa13.31□□□□□ -0.28
PMS1-206ENST00000418224 AGPAT4-IT1Q9H0P7 198 aa13.31□□□□□ -0.28
PMS1-206ENST00000418224 SPTBN1Q01082 2364 aaKnown RBP13.31□□□□□ -0.28
PMS1-206ENST00000418224 BSNQ9UPA5 3926 aa13.31□□□□□ -0.28
PMS1-206ENST00000418224 TIMD4Q96H15 378 aa13.31□□□□□ -0.28
PMS1-206ENST00000418224 IGHV3-49A0A0A0MS15 119 aa13.3□□□□□ -0.28
PMS1-206ENST00000418224 HERVK_113P61574 105 aa13.3□□□□□ -0.28
PMS1-206ENST00000418224 TRAV2A0A0B4J234 112 aa13.3□□□□□ -0.28
PMS1-206ENST00000418224 C14orf178Q8N769 122 aaPredicted RBP13.3□□□□□ -0.28
PMS1-206ENST00000418224 OR10J6PQ8NGY7 276 aa13.29□□□□□ -0.28
PMS1-206ENST00000418224 YAE1D1Q9NRH1 226 aa13.29□□□□□ -0.28
PMS1-206ENST00000418224 LY6G5BQ8NDX9 201 aa13.29□□□□□ -0.28
PMS1-206ENST00000418224 VPREB3Q9UKI3 123 aa13.29□□□□□ -0.28
PMS1-206ENST00000418224 ECSCRQ19T08 205 aa13.29□□□□□ -0.28
PMS1-206ENST00000418224 SLC25A29Q8N8R3 303 aa13.29□□□□□ -0.28
PMS1-206ENST00000418224 FOXC1Q12948 553 aa13.28□□□□□ -0.28
PMS1-206ENST00000418224 CEP295Q9C0D2 2601 aa13.28□□□□□ -0.28
PMS1-206ENST00000418224 CRYGDP07320 174 aa13.28□□□□□ -0.28
PMS1-206ENST00000418224 ZNF56Q15929 161 aa13.28□□□□□ -0.28
PMS1-206ENST00000418224 LINC01620Q4KN68 170 aa13.28□□□□□ -0.28
PMS1-206ENST00000418224 IGHV3-33P01772 117 aa13.27□□□□□ -0.28
PMS1-206ENST00000418224 Q6Q795 121 aa13.27□□□□□ -0.28
PMS1-206ENST00000418224 SLC50A1Q9BRV3 221 aa13.27□□□□□ -0.28
PMS1-206ENST00000418224 RELNP78509 3460 aa13.27□□□□□ -0.28
PMS1-206ENST00000418224 EIF4EBP3O60516 100 aaPredicted RBP13.26□□□□□ -0.29
PMS1-206ENST00000418224 C15orf32Q32M92 178 aa13.26□□□□□ -0.29
PMS1-206ENST00000418224 VMO1Q7Z5L0 202 aa13.26□□□□□ -0.29
PMS1-206ENST00000418224 IGHV3-64A0A075B6Q5 118 aa13.26□□□□□ -0.29
PMS1-206ENST00000418224 M0QXV9 152 aa13.26□□□□□ -0.29
PMS1-206ENST00000418224 MSRB2Q9Y3D2 182 aa13.26□□□□□ -0.29
PMS1-206ENST00000418224 IGLV4-69A0A075B6H9 119 aa13.25□□□□□ -0.29
PMS1-206ENST00000418224 ATXN8Q156A1 80 aa13.25□□□□□ -0.29
PMS1-206ENST00000418224 ODF3BA8MYP8 253 aa13.24□□□□□ -0.29
PMS1-206ENST00000418224 H3BMM0 161 aa13.24□□□□□ -0.29
PMS1-206ENST00000418224 UBE2WQ96B02 151 aa13.24□□□□□ -0.29
PMS1-206ENST00000418224 SVEP1Q4LDE5 3571 aa13.24□□□□□ -0.29
PMS1-206ENST00000418224 ASH1LQ9NR48 2969 aaKnown RBP13.24□□□□□ -0.29
PMS1-206ENST00000418224 IGHV7-81A0A0B4J1V7 117 aa13.24□□□□□ -0.29
PMS1-206ENST00000418224 LGALS3P17931 250 aaKnown RBP13.24□□□□□ -0.29
PMS1-206ENST00000418224 S100A4P26447 101 aaKnown RBP13.24□□□□□ -0.29
PMS1-206ENST00000418224 TP53TG1Q9Y2A0 90 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms