RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 A0A087WTM6 91 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 TRBV7-9A0A0J9YWB2 115 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 M0R3E3 92 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 PRB4P10163 310 aaPredicted RBP6.53□□□□□ -1.36
RFFL-203ENST00000413582 RPL35P42766 123 aaKnown RBP6.53□□□□□ -1.36
RFFL-203ENST00000413582 UBE2G1P62253 170 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 HAMPP81172 84 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 HIST1H1AQ02539 215 aaPredicted RBP6.53□□□□□ -1.36
RFFL-203ENST00000413582 TMEM241Q24JQ0 296 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 C9orf47Q6ZRZ4 202 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 ZNF738Q8NE65 137 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 OR8A1Q8NGG7 326 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 BIN3Q9NQY0 253 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 NAT8Q9UHE5 227 aa6.53□□□□□ -1.36
RFFL-203ENST00000413582 HMCN2Q8NDA2 5059 aa6.52□□□□□ -1.36
RFFL-203ENST00000413582 A0A096LPF7 62 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 GAGE12BA1L429 117 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 B4DEV8 164 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 PRAC2D3DTV9 90 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 GAGE7O76087 117 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 GAGE12FP0CL80 117 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 GAGE12GP0CL81 117 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 GAGE12IP0CL82 117 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 ADCYAP1P18509 176 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 GNG5P63218 68 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 FLI1Q01543 452 aaPredicted RBP6.52□□□□□ -1.37
RFFL-203ENST00000413582 SAPCD1Q5SSQ6 148 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 GOLT1AQ6ZVE7 132 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 COX8CQ7Z4L0 72 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 SVBPQ8N300 66 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 TVP23CQ96ET8 276 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 VSIG2Q96IQ7 327 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 SDF2L1Q9HCN8 221 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 PSG8Q9UQ74 426 aa6.52□□□□□ -1.37
RFFL-203ENST00000413582 NPIPB6E9PJ23 425 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 FAM229AH3BQW9 127 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 H7BYZ3 331 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 SIVA1O15304 175 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 SNAPINO95295 136 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 LTAP01374 205 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 IGLV2-11P01706 119 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 CDKN1BP46527 198 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 GNG4P50150 75 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 CEBPGP53567 150 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 ZNF674Q2M3X9 581 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 TMEM78Q5T7P6 136 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 CFAP161Q6P656 301 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 BAGE2Q86Y30 109 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 TMEM183AQ8IXX5 376 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 ODF3Q96PU9 254 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 MLST8Q9BVC4 326 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 TNFRSF18Q9Y5U5 241 aa6.51□□□□□ -1.37
RFFL-203ENST00000413582 TRBV20OR9-2A0A075B6H5 130 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 NXPH4O95158 308 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 APOC3P02656 99 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 ZNF138P52744 262 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 KIR3DS1Q14943 382 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 CENPWQ5EE01 88 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 Q86TA4 180 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 LINC00479Q96M42 142 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 C20orf144Q9BQM9 153 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 NDFIP1Q9BT67 221 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 DERL1Q9BUN8 251 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 AGPAT4-IT1Q9H0P7 198 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 ZNF492Q9P255 531 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 RPH3ALQ9UNE2 315 aa6.5□□□□□ -1.37
RFFL-203ENST00000413582 IGKV2-40A0A087WW87 121 aaPredicted RBP6.49□□□□□ -1.37
RFFL-203ENST00000413582 TRAV34A0A0B4J273 112 aa6.49□□□□□ -1.37
RFFL-203ENST00000413582 GCGP01275 180 aa6.49□□□□□ -1.37
RFFL-203ENST00000413582 IGKV2D-40P01614 121 aaPredicted RBP6.49□□□□□ -1.37
RFFL-203ENST00000413582 IGLV2-8P01709 118 aa6.49□□□□□ -1.37
RFFL-203ENST00000413582 GCSHP23434 173 aa6.49□□□□□ -1.37
RFFL-203ENST00000413582 RPL23P62829 140 aaKnown RBP6.49□□□□□ -1.37
RFFL-203ENST00000413582 RHEBQ15382 184 aa6.49□□□□□ -1.37
RFFL-203ENST00000413582 LINC01551Q86U37 167 aa6.49□□□□□ -1.37
RFFL-203ENST00000413582 NFE4Q86UQ8 179 aa6.49□□□□□ -1.37
RFFL-203ENST00000413582 OCC1Q8TAD7 63 aa6.49□□□□□ -1.37
RFFL-203ENST00000413582 A0A087WWC5 75 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 TRAV8-1A0A0A6YYK1 113 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 KRTAP29-1A8MX34 341 aaPredicted RBP6.48□□□□□ -1.37
RFFL-203ENST00000413582 PPP1R2P9O14990 202 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 CRISP2P16562 243 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 SMUG1Q53HV7 270 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 GFI1BQ5VTD9 330 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 Q6ZTI0 123 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 FAM231DQ6ZW35 169 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 PRNTQ86SH4 94 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 CLRN3Q8NCR9 226 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 FAM19A4Q96LR4 140 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 VGLL1Q99990 258 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 TMEM70Q9BUB7 260 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 CTDSP1Q9GZU7 261 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 TMEM242Q9NWH2 141 aa6.48□□□□□ -1.37
RFFL-203ENST00000413582 SNURFLB1AK76 121 aa6.47□□□□□ -1.37
RFFL-203ENST00000413582 LCE2BO14633 110 aa6.47□□□□□ -1.37
RFFL-203ENST00000413582 MT-ND4LP03901 98 aa6.47□□□□□ -1.37
RFFL-203ENST00000413582 CT45A10P0DMU9 189 aa6.47□□□□□ -1.37
RFFL-203ENST00000413582 LEPP41159 167 aa6.47□□□□□ -1.37
RFFL-203ENST00000413582 DAZ2Q13117 558 aaKnown RBP6.47□□□□□ -1.37
RFFL-203ENST00000413582 ERCC8Q13216 396 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms