RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TRAV4A0A0B4J268 109 aa15.6■□□□□ 0.09
PTCD3-203ENST00000409783 H3BNG1 76 aa15.6■□□□□ 0.09
PTCD3-203ENST00000409783 NDUFS6O75380 124 aaKnown RBP15.6■□□□□ 0.09
PTCD3-203ENST00000409783 RPL19P84098 196 aaKnown RBP15.6■□□□□ 0.09
PTCD3-203ENST00000409783 ZNF876PQ49A33 203 aa15.6■□□□□ 0.09
PTCD3-203ENST00000409783 DNAH6Q9C0G6 4158 aa15.6■□□□□ 0.09
PTCD3-203ENST00000409783 A0A0J9YY99 117 aa15.59■□□□□ 0.09
PTCD3-203ENST00000409783 C9JCJ5 164 aa15.59■□□□□ 0.09
PTCD3-203ENST00000409783 H3BVH4 76 aa15.59■□□□□ 0.09
PTCD3-203ENST00000409783 S100A4P26447 101 aaKnown RBP15.59■□□□□ 0.09
PTCD3-203ENST00000409783 SCRT2Q9NQ03 307 aa15.59■□□□□ 0.09
PTCD3-203ENST00000409783 ARMS2P0C7Q2 107 aa15.58■□□□□ 0.08
PTCD3-203ENST00000409783 P0DMU3 169 aa15.58■□□□□ 0.08
PTCD3-203ENST00000409783 FAM231AP0DMU4 169 aa15.58■□□□□ 0.08
PTCD3-203ENST00000409783 FAM231CP0DMU5 169 aa15.58■□□□□ 0.08
PTCD3-203ENST00000409783 EIF5A2Q9GZV4 153 aaKnown RBP15.58■□□□□ 0.08
PTCD3-203ENST00000409783 PARLQ9H300 379 aa15.58■□□□□ 0.08
PTCD3-203ENST00000409783 C19orf71A6NCJ1 209 aa15.57■□□□□ 0.08
PTCD3-203ENST00000409783 RS1O15537 224 aa15.57■□□□□ 0.08
PTCD3-203ENST00000409783 NUDT3O95989 172 aa15.57■□□□□ 0.08
PTCD3-203ENST00000409783 CXCL1P09341 107 aa15.57■□□□□ 0.08
PTCD3-203ENST00000409783 MGST1P10620 155 aaKnown RBP15.57■□□□□ 0.08
PTCD3-203ENST00000409783 PIK3CD-AS1Q5SR53 167 aa15.57■□□□□ 0.08
PTCD3-203ENST00000409783 OR4C5Q8NGB2 326 aa15.57■□□□□ 0.08
PTCD3-203ENST00000409783 SRP19P09132 144 aaKnown RBP15.56■□□□□ 0.08
PTCD3-203ENST00000409783 CRYBA4P53673 196 aa15.56■□□□□ 0.08
PTCD3-203ENST00000409783 CFAP126Q5VTH2 177 aa15.56■□□□□ 0.08
PTCD3-203ENST00000409783 PRO0255Q9UI72 69 aa15.56■□□□□ 0.08
PTCD3-203ENST00000409783 SLAQ13239 276 aa15.55■□□□□ 0.08
PTCD3-203ENST00000409783 OCC1Q8TAD7 63 aa15.55■□□□□ 0.08
PTCD3-203ENST00000409783 HHLA3Q9XRX5 114 aa15.55■□□□□ 0.08
PTCD3-203ENST00000409783 TRGV4A0A0C4DH28 118 aa15.54■□□□□ 0.08
PTCD3-203ENST00000409783 K7EN84 100 aa15.54■□□□□ 0.08
PTCD3-203ENST00000409783 MED14OSP0DP75 135 aa15.54■□□□□ 0.08
PTCD3-203ENST00000409783 DMRTA1Q5VZB9 504 aa15.54■□□□□ 0.08
PTCD3-203ENST00000409783 A0A096LPF7 62 aa15.53■□□□□ 0.08
PTCD3-203ENST00000409783 PAX4O43316 350 aa15.53■□□□□ 0.08
PTCD3-203ENST00000409783 RNF212Q495C1 297 aa15.53■□□□□ 0.08
PTCD3-203ENST00000409783 SSBP4Q9BWG4 385 aaPredicted RBP15.53■□□□□ 0.08
PTCD3-203ENST00000409783 GATA1P15976 413 aaPredicted RBP15.52■□□□□ 0.08
PTCD3-203ENST00000409783 JPT2Q9H910 190 aa15.52■□□□□ 0.08
PTCD3-203ENST00000409783 C9JQL5 133 aa15.51■□□□□ 0.07
PTCD3-203ENST00000409783 SNAI2O43623 268 aa15.51■□□□□ 0.07
PTCD3-203ENST00000409783 SRSF3P84103 164 aaKnown RBP15.51■□□□□ 0.07
PTCD3-203ENST00000409783 BIN3Q9NQY0 253 aa15.51■□□□□ 0.07
PTCD3-203ENST00000409783 PHLDA3Q9Y5J5 127 aa15.51■□□□□ 0.07
PTCD3-203ENST00000409783 CIDEAO60543 219 aa15.5■□□□□ 0.07
PTCD3-203ENST00000409783 CEBPGP53567 150 aa15.5■□□□□ 0.07
PTCD3-203ENST00000409783 UFSP1Q6NVU6 142 aa15.5■□□□□ 0.07
PTCD3-203ENST00000409783 NUDT10Q8NFP7 164 aa15.5■□□□□ 0.07
PTCD3-203ENST00000409783 DAZAP1Q96EP5 407 aaKnown RBP15.5■□□□□ 0.07
PTCD3-203ENST00000409783 NUDT11Q96G61 164 aa15.5■□□□□ 0.07
PTCD3-203ENST00000409783 A8MWV9 139 aa15.49■□□□□ 0.07
PTCD3-203ENST00000409783 NXPH4O95158 308 aa15.49■□□□□ 0.07
PTCD3-203ENST00000409783 OR5AL1P0C617 328 aa15.49■□□□□ 0.07
PTCD3-203ENST00000409783 IFITM2Q01629 132 aa15.49■□□□□ 0.07
PTCD3-203ENST00000409783 SYT8Q8NBV8 401 aa15.49■□□□□ 0.07
PTCD3-203ENST00000409783 OR2D3Q8NGH3 330 aa15.49■□□□□ 0.07
PTCD3-203ENST00000409783 SAMD10Q9BYL1 202 aa15.49■□□□□ 0.07
PTCD3-203ENST00000409783 LINC00588Q9Y4M8 146 aa15.49■□□□□ 0.07
PTCD3-203ENST00000409783 IGHV3-73A0A0B4J1V6 119 aa15.48■□□□□ 0.07
PTCD3-203ENST00000409783 P01737 135 aa15.48■□□□□ 0.07
PTCD3-203ENST00000409783 IGLC6P0CF74 106 aa15.48■□□□□ 0.07
PTCD3-203ENST00000409783 GZMBP10144 247 aa15.48■□□□□ 0.07
PTCD3-203ENST00000409783 UBE2DNLQ8IWF7 75 aa15.48■□□□□ 0.07
PTCD3-203ENST00000409783 OR10AG1Q8NH19 301 aa15.48■□□□□ 0.07
PTCD3-203ENST00000409783 SMIM7Q9BQ49 75 aa15.48■□□□□ 0.07
PTCD3-203ENST00000409783 LY96Q9Y6Y9 160 aa15.48■□□□□ 0.07
PTCD3-203ENST00000409783 M0R381 172 aa15.47■□□□□ 0.07
PTCD3-203ENST00000409783 RPS20P60866 119 aaKnown RBP15.47■□□□□ 0.07
PTCD3-203ENST00000409783 ESRGQ1W209 222 aa15.47■□□□□ 0.07
PTCD3-203ENST00000409783 ZFP2Q6ZN57 461 aa15.47■□□□□ 0.07
PTCD3-203ENST00000409783 ZFP82Q8N141 532 aa15.47■□□□□ 0.07
PTCD3-203ENST00000409783 SFRP2Q96HF1 295 aa15.47■□□□□ 0.07
PTCD3-203ENST00000409783 RNASE7Q9H1E1 156 aaKnown RBP15.47■□□□□ 0.07
PTCD3-203ENST00000409783 ICOSQ9Y6W8 199 aa15.47■□□□□ 0.07
PTCD3-203ENST00000409783 K7EQD1 137 aa15.46■□□□□ 0.07
PTCD3-203ENST00000409783 FAM3BP58499 235 aaPredicted RBP15.46■□□□□ 0.07
PTCD3-203ENST00000409783 Q6ZSN1 163 aa15.46■□□□□ 0.07
PTCD3-203ENST00000409783 SLC25A29Q8N8R3 303 aa15.46■□□□□ 0.07
PTCD3-203ENST00000409783 SMDT1Q9H4I9 107 aa15.46■□□□□ 0.07
PTCD3-203ENST00000409783 LOC100131303A0A0U1RQF7 123 aa15.45■□□□□ 0.06
PTCD3-203ENST00000409783 ZNF727A8MUV8 499 aa15.45■□□□□ 0.06
PTCD3-203ENST00000409783 CRYGDP07320 174 aa15.45■□□□□ 0.06
PTCD3-203ENST00000409783 GYPEP15421 78 aa15.45■□□□□ 0.06
PTCD3-203ENST00000409783 CCL18P55774 89 aa15.45■□□□□ 0.06
PTCD3-203ENST00000409783 MRPL23Q16540 153 aaKnown RBP15.45■□□□□ 0.06
PTCD3-203ENST00000409783 MUC21A0A0G2JKD1 596 aa15.44■□□□□ 0.06
PTCD3-203ENST00000409783 MUC21A0A140T8X8 626 aa15.44■□□□□ 0.06
PTCD3-203ENST00000409783 TRBV6-4A0A1B0GX49 114 aa15.44■□□□□ 0.06
PTCD3-203ENST00000409783 PEA15Q15121 130 aa15.44■□□□□ 0.06
PTCD3-203ENST00000409783 FAM231DQ6ZW35 169 aa15.44■□□□□ 0.06
PTCD3-203ENST00000409783 LINC01551Q86U37 167 aa15.44■□□□□ 0.06
PTCD3-203ENST00000409783 FER1L6-AS1Q8NA97 138 aa15.43■□□□□ 0.06
PTCD3-203ENST00000409783 ZNRF2Q8NHG8 242 aa15.43■□□□□ 0.06
PTCD3-203ENST00000409783 RPP21Q9H633 154 aaKnown RBP15.43■□□□□ 0.06
PTCD3-203ENST00000409783 CLLU1Q5K131 121 aa15.42■□□□□ 0.06
PTCD3-203ENST00000409783 A0A087WWL8 130 aa15.41■□□□□ 0.06
PTCD3-203ENST00000409783 XKRY2A2RUG3 117 aa15.41■□□□□ 0.06
PTCD3-203ENST00000409783 RHODO00212 210 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms