RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 FOXI2Q6ZQN5 318 aa15.04■□□□□ -0
CCDC47-202ENST00000403162 C20orf78Q9BR46 151 aa15.04■□□□□ -0
CCDC47-202ENST00000403162 VPS13CQ709C8 3753 aa15.04■□□□□ -0
CCDC47-202ENST00000403162 MED13LQ71F56 2210 aa15.04■□□□□ -0
CCDC47-202ENST00000403162 TEX48A0A1B0GUV7 120 aa15.04■□□□□ -0
CCDC47-202ENST00000403162 C20orf173Q96LM9 149 aa15.04■□□□□ -0
CCDC47-202ENST00000403162 LINC00477Q96M19 166 aa15.04■□□□□ -0
CCDC47-202ENST00000403162 FAM223BA6NKX1 122 aa15.03■□□□□ -0
CCDC47-202ENST00000403162 SUMO2P61956 95 aaKnown RBP15.03■□□□□ -0
CCDC47-202ENST00000403162 RPL24P83731 157 aaKnown RBP15.03■□□□□ -0
CCDC47-202ENST00000403162 C19orf54Q5BKX5 351 aa15.03■□□□□ -0
CCDC47-202ENST00000403162 FAM223AQ8IWN6 122 aa15.03■□□□□ -0
CCDC47-202ENST00000403162 ZNF479Q96JC4 524 aa15.03■□□□□ -0
CCDC47-202ENST00000403162 Q96MF0 132 aa15.03■□□□□ -0
CCDC47-202ENST00000403162 UNC79Q9P2D8 2635 aa15.03■□□□□ -0
CCDC47-202ENST00000403162 TRBV7-3A0A075B6L6 115 aa15.02■□□□□ -0
CCDC47-202ENST00000403162 RNF223E7ERA6 249 aa15.02■□□□□ -0
CCDC47-202ENST00000403162 NPFFO15130 113 aa15.02■□□□□ -0
CCDC47-202ENST00000403162 ZFAND2AQ8N6M9 145 aa15.02■□□□□ -0
CCDC47-202ENST00000403162 RASL10AQ92737 203 aa15.02■□□□□ -0
CCDC47-202ENST00000403162 HIST1H4GQ99525 98 aa15.02■□□□□ -0
CCDC47-202ENST00000403162 CHTOPQ9Y3Y2 248 aaKnown RBP15.02■□□□□ -0
CCDC47-202ENST00000403162 TMEM238C9JI98 176 aa15.02□□□□□ -0.01
CCDC47-202ENST00000403162 F8W1H4 67 aa15.02□□□□□ -0.01
CCDC47-202ENST00000403162 KRTAP1-3Q8IUG1 177 aa15.02□□□□□ -0.01
CCDC47-202ENST00000403162 NEXN-AS1Q8NBZ9 246 aa15.02□□□□□ -0.01
CCDC47-202ENST00000403162 SCGB3A1Q96QR1 104 aa15.02□□□□□ -0.01
CCDC47-202ENST00000403162 TRAV21A0A0B4J279 112 aa15.01□□□□□ -0.01
CCDC47-202ENST00000403162 A0A1B0GWB2 263 aa15.01□□□□□ -0.01
CCDC47-202ENST00000403162 DPH3P1Q9H4G8 78 aa15.01□□□□□ -0.01
CCDC47-202ENST00000403162 A0A096LNT2 108 aa15.01□□□□□ -0.01
CCDC47-202ENST00000403162 MYMXA0A1B0GTQ4 84 aa15.01□□□□□ -0.01
CCDC47-202ENST00000403162 OR11H12B2RN74 326 aa15.01□□□□□ -0.01
CCDC47-202ENST00000403162 IGF1P05019 195 aa15.01□□□□□ -0.01
CCDC47-202ENST00000403162 CRIP2P52943 208 aaPredicted RBP15.01□□□□□ -0.01
CCDC47-202ENST00000403162 MAPK1IP1LQ8NDC0 245 aa15.01□□□□□ -0.01
CCDC47-202ENST00000403162 OR11H1Q8NG94 326 aa15.01□□□□□ -0.01
CCDC47-202ENST00000403162 OR11H2Q8NH07 326 aa15.01□□□□□ -0.01
CCDC47-202ENST00000403162 TRAV41A0A0B4J266 112 aa15□□□□□ -0.01
CCDC47-202ENST00000403162 M0R381 172 aa15□□□□□ -0.01
CCDC47-202ENST00000403162 MED14OSP0DP75 135 aa15□□□□□ -0.01
CCDC47-202ENST00000403162 AGRNO00468 2067 aa15□□□□□ -0.01
CCDC47-202ENST00000403162 MAP1AP78559 2803 aaPredicted RBP15□□□□□ -0.01
CCDC47-202ENST00000403162 OVOL1O14753 267 aa15□□□□□ -0.01
CCDC47-202ENST00000403162 GPHB5Q86YW7 130 aa15□□□□□ -0.01
CCDC47-202ENST00000403162 OR10J6PQ8NGY7 276 aa15□□□□□ -0.01
CCDC47-202ENST00000403162 MSMBP08118 114 aa14.99□□□□□ -0.01
CCDC47-202ENST00000403162 ASIPP42127 132 aa14.99□□□□□ -0.01
CCDC47-202ENST00000403162 MOB4Q9Y3A3 225 aa14.99□□□□□ -0.01
CCDC47-202ENST00000403162 SOCS3O14543 225 aa14.98□□□□□ -0.01
CCDC47-202ENST00000403162 ARL3P36405 182 aa14.98□□□□□ -0.01
CCDC47-202ENST00000403162 B4DSR2 109 aa14.98□□□□□ -0.01
CCDC47-202ENST00000403162 RRN3P1Q2M238 152 aa14.98□□□□□ -0.01
CCDC47-202ENST00000403162 SPANXB1Q9NS25 103 aaPredicted RBP14.98□□□□□ -0.01
CCDC47-202ENST00000403162 ABCA2Q9BZC7 2435 aa14.97□□□□□ -0.01
CCDC47-202ENST00000403162 S100A4P26447 101 aaKnown RBP14.97□□□□□ -0.01
CCDC47-202ENST00000403162 WFDC11Q8NEX6 87 aa14.97□□□□□ -0.01
CCDC47-202ENST00000403162 RPL39LQ96EH5 51 aaKnown RBP14.97□□□□□ -0.01
CCDC47-202ENST00000403162 FAM19A4Q96LR4 140 aa14.97□□□□□ -0.01
CCDC47-202ENST00000403162 KLK15Q9H2R5 256 aa14.97□□□□□ -0.01
CCDC47-202ENST00000403162 PHLDA3Q9Y5J5 127 aa14.97□□□□□ -0.01
CCDC47-202ENST00000403162 J3KRW8 73 aa14.97□□□□□ -0.01
CCDC47-202ENST00000403162 NDUFA4O00483 81 aa14.97□□□□□ -0.01
CCDC47-202ENST00000403162 BAALCQ8WXS3 180 aa14.97□□□□□ -0.01
CCDC47-202ENST00000403162 ITPR2Q14571 2701 aa14.96□□□□□ -0.01
CCDC47-202ENST00000403162 PDZD2O15018 2839 aa14.96□□□□□ -0.01
CCDC47-202ENST00000403162 WFDC2Q14508 124 aa14.96□□□□□ -0.01
CCDC47-202ENST00000403162 C2orf66Q6UXQ4 117 aa14.96□□□□□ -0.01
CCDC47-202ENST00000403162 TMEM219Q86XT9 240 aa14.96□□□□□ -0.01
CCDC47-202ENST00000403162 APRG1Q8IVJ8 170 aa14.96□□□□□ -0.01
CCDC47-202ENST00000403162 C14orf178Q8N769 122 aaPredicted RBP14.96□□□□□ -0.01
CCDC47-202ENST00000403162 PPP1R17O96001 155 aa14.95□□□□□ -0.02
CCDC47-202ENST00000403162 LGALS1P09382 135 aaKnown RBP14.95□□□□□ -0.02
CCDC47-202ENST00000403162 ANXA2RQ3ZCQ2 193 aa14.95□□□□□ -0.02
CCDC47-202ENST00000403162 UNQ9165/PRO28630Q6UXU0 137 aa14.95□□□□□ -0.02
CCDC47-202ENST00000403162 LINC01356Q8N9X3 169 aa14.95□□□□□ -0.02
CCDC47-202ENST00000403162 PRRC2AP48634 2157 aaKnown RBP14.95□□□□□ -0.02
CCDC47-202ENST00000403162 H3BMG7 143 aa14.94□□□□□ -0.02
CCDC47-202ENST00000403162 POM121L12Q8N7R1 296 aa14.94□□□□□ -0.02
CCDC47-202ENST00000403162 TRBV7-9A0A0J9YWB2 115 aa14.94□□□□□ -0.02
CCDC47-202ENST00000403162 J3QR89 54 aa14.93□□□□□ -0.02
CCDC47-202ENST00000403162 SPRY2O43597 315 aa14.93□□□□□ -0.02
CCDC47-202ENST00000403162 MGPP08493 103 aa14.93□□□□□ -0.02
CCDC47-202ENST00000403162 LINC00527Q9UJ94 153 aa14.93□□□□□ -0.02
CCDC47-202ENST00000403162 PRSS29PA6NIE9 313 aa14.92□□□□□ -0.02
CCDC47-202ENST00000403162 PRADC1Q9BSG0 188 aa14.92□□□□□ -0.02
CCDC47-202ENST00000403162 NXPH4O95158 308 aa14.92□□□□□ -0.02
CCDC47-202ENST00000403162 TRBV12-3P01733 135 aa14.92□□□□□ -0.02
CCDC47-202ENST00000403162 IGHV4-31P0DP07 118 aa14.92□□□□□ -0.02
CCDC47-202ENST00000403162 RNASE3P12724 160 aaKnown RBP14.92□□□□□ -0.02
CCDC47-202ENST00000403162 PRO0461Q9UI25 63 aa14.92□□□□□ -0.02
CCDC47-202ENST00000403162 TGFAP01135 160 aa14.91□□□□□ -0.02
CCDC47-202ENST00000403162 GAGE13Q4V321 117 aa14.91□□□□□ -0.02
CCDC47-202ENST00000403162 CYSLTR1Q9Y271 337 aa14.91□□□□□ -0.02
CCDC47-202ENST00000403162 CCDC168Q8NDH2 2452 aa14.91□□□□□ -0.02
CCDC47-202ENST00000403162 BRI3O95415 125 aa14.91□□□□□ -0.02
CCDC47-202ENST00000403162 RNASE4P34096 147 aaKnown RBP14.91□□□□□ -0.02
CCDC47-202ENST00000403162 RPL32P62910 135 aaKnown RBP14.91□□□□□ -0.02
CCDC47-202ENST00000403162 SAMD13Q5VXD3 122 aa14.91□□□□□ -0.02
CCDC47-202ENST00000403162 MORN3Q6PF18 240 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms