RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 C1QTNF4Q9BXJ3 329 aa13.73□□□□□ -0.21
KDM1A-202ENST00000400181 CDSNQ15517 529 aa13.73□□□□□ -0.21
KDM1A-202ENST00000400181 ANXA2RQ3ZCQ2 193 aa13.73□□□□□ -0.21
KDM1A-202ENST00000400181 CFAP126Q5VTH2 177 aa13.73□□□□□ -0.21
KDM1A-202ENST00000400181 COL12A1Q99715 3063 aa13.72□□□□□ -0.21
KDM1A-202ENST00000400181 IGF2-ASQ6U949 168 aa13.72□□□□□ -0.21
KDM1A-202ENST00000400181 C9orf47Q6ZRZ4 202 aa13.72□□□□□ -0.21
KDM1A-202ENST00000400181 PRSS47A8MTI9 375 aa13.72□□□□□ -0.21
KDM1A-202ENST00000400181 IGHV3OR16-10A0A075B7F0 116 aa13.72□□□□□ -0.21
KDM1A-202ENST00000400181 EEF1AKMT3Q96AZ1 226 aa13.72□□□□□ -0.21
KDM1A-202ENST00000400181 DPH3P1Q9H4G8 78 aa13.72□□□□□ -0.21
KDM1A-202ENST00000400181 GEMIN7Q9H840 131 aaKnown RBP13.72□□□□□ -0.21
KDM1A-202ENST00000400181 TMEM238LA0A1B0GVL6 79 aa13.71□□□□□ -0.21
KDM1A-202ENST00000400181 A6NJY4 79 aa13.71□□□□□ -0.21
KDM1A-202ENST00000400181 CCL21O00585 134 aa13.71□□□□□ -0.21
KDM1A-202ENST00000400181 FHL3Q13643 280 aa13.71□□□□□ -0.21
KDM1A-202ENST00000400181 SORL1Q92673 2214 aa13.71□□□□□ -0.21
KDM1A-202ENST00000400181 IGF2RP11717 2491 aa13.71□□□□□ -0.21
KDM1A-202ENST00000400181 C11orf86A6NJI1 115 aa13.71□□□□□ -0.22
KDM1A-202ENST00000400181 ASIPP42127 132 aa13.71□□□□□ -0.22
KDM1A-202ENST00000400181 SCGB1C2P0DMR2 95 aa13.7□□□□□ -0.22
KDM1A-202ENST00000400181 RPL39P62891 51 aaKnown RBP13.7□□□□□ -0.22
KDM1A-202ENST00000400181 CDIP1Q9H305 208 aa13.7□□□□□ -0.22
KDM1A-202ENST00000400181 H7C2G1 150 aa13.7□□□□□ -0.22
KDM1A-202ENST00000400181 TMEM170BQ5T4T1 132 aa13.7□□□□□ -0.22
KDM1A-202ENST00000400181 Q6ZS46 218 aa13.7□□□□□ -0.22
KDM1A-202ENST00000400181 JPT2Q9H910 190 aa13.7□□□□□ -0.22
KDM1A-202ENST00000400181 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.7□□□□□ -0.221e-6■■■■■ 28.4
KDM1A-202ENST00000400181 SRD5A1P18405 259 aa13.7□□□□□ -0.22
KDM1A-202ENST00000400181 IGHV4-4A0A075B6R2 117 aa13.69□□□□□ -0.22
KDM1A-202ENST00000400181 SAA4P35542 130 aa13.69□□□□□ -0.22
KDM1A-202ENST00000400181 TP53TG1Q9Y2A0 90 aa13.69□□□□□ -0.22
KDM1A-202ENST00000400181 F5H697 171 aa13.69□□□□□ -0.22
KDM1A-202ENST00000400181 TRBV12-3P01733 135 aa13.69□□□□□ -0.22
KDM1A-202ENST00000400181 UNQ9165/PRO28630Q6UXU0 137 aa13.69□□□□□ -0.22
KDM1A-202ENST00000400181 XGP55808 180 aa13.68□□□□□ -0.22
KDM1A-202ENST00000400181 ZFAND2AQ8N6M9 145 aa13.68□□□□□ -0.22
KDM1A-202ENST00000400181 OR10J6PQ8NGY7 276 aa13.68□□□□□ -0.22
KDM1A-202ENST00000400181 CREBBPQ92793 2442 aa13.68□□□□□ -0.22
KDM1A-202ENST00000400181 EBI3Q14213 229 aa13.68□□□□□ -0.22
KDM1A-202ENST00000400181 KIR2DL4Q99706 377 aa13.68□□□□□ -0.22
KDM1A-202ENST00000400181 A0A087WWL8 130 aa13.67□□□□□ -0.22
KDM1A-202ENST00000400181 TCL1BO95988 128 aa13.67□□□□□ -0.22
KDM1A-202ENST00000400181 TRAV21A0A0B4J279 112 aa13.67□□□□□ -0.22
KDM1A-202ENST00000400181 IGHV3-11P01762 117 aa13.67□□□□□ -0.22
KDM1A-202ENST00000400181 CRYBA4P53673 196 aa13.67□□□□□ -0.22
KDM1A-202ENST00000400181 CRYGDP07320 174 aa13.67□□□□□ -0.22
KDM1A-202ENST00000400181 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
KDM1A-202ENST00000400181 RAX2Q96IS3 184 aa13.67□□□□□ -0.22
KDM1A-202ENST00000400181 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
KDM1A-202ENST00000400181 MUC4Q99102 2169 aa13.66□□□□□ -0.22
KDM1A-202ENST00000400181 IGHV3-64A0A075B6Q5 118 aa13.66□□□□□ -0.22
KDM1A-202ENST00000400181 RNF223E7ERA6 249 aa13.66□□□□□ -0.22
KDM1A-202ENST00000400181 UBE2D1P51668 147 aa13.66□□□□□ -0.22
KDM1A-202ENST00000400181 CARD19Q96LW7 228 aa13.66□□□□□ -0.22
KDM1A-202ENST00000400181 MUC6Q6W4X9 2439 aa13.66□□□□□ -0.22
KDM1A-202ENST00000400181 COX6B1P14854 86 aa13.65□□□□□ -0.22
KDM1A-202ENST00000400181 TSPEAR-AS2P59090 65 aa13.65□□□□□ -0.22
KDM1A-202ENST00000400181 NDUFA11Q86Y39 141 aa13.65□□□□□ -0.22
KDM1A-202ENST00000400181 FAM74A4Q5TZK3 123 aa13.65□□□□□ -0.22
KDM1A-202ENST00000400181 A0A0J9YY99 117 aa13.65□□□□□ -0.23
KDM1A-202ENST00000400181 TSHBP01222 138 aa13.65□□□□□ -0.23
KDM1A-202ENST00000400181 CD7P09564 240 aa13.65□□□□□ -0.23
KDM1A-202ENST00000400181 Q6ZUT4 128 aa13.65□□□□□ -0.23
KDM1A-202ENST00000400181 SPG11Q96JI7 2443 aa13.64□□□□□ -0.23
KDM1A-202ENST00000400181 OOSP1A8MZH6 123 aa13.64□□□□□ -0.23
KDM1A-202ENST00000400181 LINC01619G3V211 115 aa13.64□□□□□ -0.23
KDM1A-202ENST00000400181 HERVK_113P61574 105 aa13.64□□□□□ -0.23
KDM1A-202ENST00000400181 TCTEX1D4Q5JR98 221 aa13.64□□□□□ -0.23
KDM1A-202ENST00000400181 TRBV7-1A0A0A6YYK4 115 aa13.63□□□□□ -0.23
KDM1A-202ENST00000400181 C9orf139Q6ZV77 190 aa13.63□□□□□ -0.23
KDM1A-202ENST00000400181 MRPL53Q96EL3 112 aaKnown RBP13.63□□□□□ -0.23
KDM1A-202ENST00000400181 OPRPNQ99935 248 aaPredicted RBP13.63□□□□□ -0.23
KDM1A-202ENST00000400181 ZNF256Q9Y2P7 627 aaPredicted RBP13.63□□□□□ -0.23
KDM1A-202ENST00000400181 IGLV4-69A0A075B6H9 119 aa13.63□□□□□ -0.23
KDM1A-202ENST00000400181 GPHB5Q86YW7 130 aa13.63□□□□□ -0.23
KDM1A-202ENST00000400181 CFC1BP0CG36 223 aa13.62□□□□□ -0.23
KDM1A-202ENST00000400181 CFC1P0CG37 223 aa13.62□□□□□ -0.23
KDM1A-202ENST00000400181 SIRPDQ9H106 197 aa13.62□□□□□ -0.23
KDM1A-202ENST00000400181 RNASE3P12724 160 aaKnown RBP13.62□□□□□ -0.23
KDM1A-202ENST00000400181 LINC00477Q96M19 166 aa13.62□□□□□ -0.23
KDM1A-202ENST00000400181 PPDPFLQ8WWR9 84 aa13.62□□□□□ -0.23
KDM1A-202ENST00000400181 A8MWV9 139 aa13.61□□□□□ -0.23
KDM1A-202ENST00000400181 UBE2D3P61077 147 aa13.61□□□□□ -0.23
KDM1A-202ENST00000400181 UBE2D2P62837 147 aa13.61□□□□□ -0.23
KDM1A-202ENST00000400181 TEN1Q86WV5 123 aa13.61□□□□□ -0.23
KDM1A-202ENST00000400181 ITLN2Q8WWU7 325 aaPredicted RBP13.61□□□□□ -0.23
KDM1A-202ENST00000400181 UBTD1Q9HAC8 227 aa13.61□□□□□ -0.23
KDM1A-202ENST00000400181 ANKRD29Q8N6D5 301 aa13.61□□□□□ -0.23
KDM1A-202ENST00000400181 U3KQE9 123 aa13.61□□□□□ -0.23
KDM1A-202ENST00000400181 CENPVL3A0A0U1RRI6 287 aa13.6□□□□□ -0.23
KDM1A-202ENST00000400181 DOPEY2Q9Y3R5 2298 aa13.6□□□□□ -0.23
KDM1A-202ENST00000400181 GATA3P23771 443 aa13.6□□□□□ -0.23
KDM1A-202ENST00000400181 AJUBAQ96IF1 538 aa13.6□□□□□ -0.23
KDM1A-202ENST00000400181 TRAV41A0A0B4J266 112 aa13.6□□□□□ -0.23
KDM1A-202ENST00000400181 PMVKQ15126 192 aa13.6□□□□□ -0.23
KDM1A-202ENST00000400181 TRPT1Q86TN4 253 aaKnown RBP13.6□□□□□ -0.23
KDM1A-202ENST00000400181 ATP6V0E2Q8NHE4 81 aa13.6□□□□□ -0.23
KDM1A-202ENST00000400181 IGKV3-20P01619 116 aa13.59□□□□□ -0.23
KDM1A-202ENST00000400181 ZNRF2Q8NHG8 242 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms