RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, human

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-208	ENST00000398493	ZMAT5	Q9UDW3	170 aa	Known RBP	13.7	□□□□□ -0.22
MBD1-208	ENST00000398493		D6R8Y8	96 aa		13.69	□□□□□ -0.22
MBD1-208	ENST00000398493		M0R143	59 aa		13.69	□□□□□ -0.22
MBD1-208	ENST00000398493	LEP	P41159	167 aa		13.69	□□□□□ -0.22
MBD1-208	ENST00000398493	MRPL51	Q4U2R6	128 aa	Known RBP	13.69	□□□□□ -0.22
MBD1-208	ENST00000398493	URB1-AS1	Q96HZ7	61 aa		13.69	□□□□□ -0.22
MBD1-208	ENST00000398493	SNAI2	O43623	268 aa		13.69	□□□□□ -0.22
MBD1-208	ENST00000398493	ZNF688	P0C7X2	276 aa		13.69	□□□□□ -0.22
MBD1-208	ENST00000398493	SPANXN1	Q5VSR9	72 aa		13.69	□□□□□ -0.22
MBD1-208	ENST00000398493	FA2H	Q7L5A8	372 aa		13.69	□□□□□ -0.22
MBD1-208	ENST00000398493	ODF3	Q96PU9	254 aa		13.69	□□□□□ -0.22
MBD1-208	ENST00000398493	PAM16	Q9Y3D7	125 aa		13.69	□□□□□ -0.22
MBD1-208	ENST00000398493	IGHV4-4	A0A075B6R2	117 aa		13.68	□□□□□ -0.22
MBD1-208	ENST00000398493	DUSP14	O95147	198 aa	Known RBP	13.68	□□□□□ -0.22
MBD1-208	ENST00000398493	CSN3	P07498	182 aa		13.68	□□□□□ -0.22
MBD1-208	ENST00000398493	S100A4	P26447	101 aa	Known RBP	13.68	□□□□□ -0.22
MBD1-208	ENST00000398493	MSRB1	Q9NZV6	116 aa		13.68	□□□□□ -0.22
MBD1-208	ENST00000398493	CRX	O43186	299 aa	Predicted RBP	13.67	□□□□□ -0.22
MBD1-208	ENST00000398493	ASIP	P42127	132 aa		13.67	□□□□□ -0.22
MBD1-208	ENST00000398493	OR9G4	Q8NGQ1	327 aa		13.67	□□□□□ -0.22
MBD1-208	ENST00000398493	TMEM70	Q9BUB7	260 aa		13.67	□□□□□ -0.22
MBD1-208	ENST00000398493	MED14OS	P0DP75	135 aa		13.67	□□□□□ -0.22
MBD1-208	ENST00000398493	DLX4	Q92988	240 aa	Predicted RBP	13.67	□□□□□ -0.22
MBD1-208	ENST00000398493	AP5S1	Q9NUS5	200 aa		13.67	□□□□□ -0.22
MBD1-208	ENST00000398493	LAMTOR2	Q9Y2Q5	125 aa		13.67	□□□□□ -0.22
MBD1-208	ENST00000398493		A0A0J9YX75	114 aa		13.66	□□□□□ -0.22
MBD1-208	ENST00000398493	KLLN	B2CW77	178 aa		13.66	□□□□□ -0.22
MBD1-208	ENST00000398493	PF4	P02776	101 aa		13.66	□□□□□ -0.22
MBD1-208	ENST00000398493	TSPO	P30536	169 aa		13.66	□□□□□ -0.22
MBD1-208	ENST00000398493	LINC00482	Q8N8I6	264 aa		13.66	□□□□□ -0.22
MBD1-208	ENST00000398493	TRAV2	A0A0B4J234	112 aa		13.65	□□□□□ -0.22
MBD1-208	ENST00000398493	IGHV1-24	A0A0C4DH33	117 aa		13.65	□□□□□ -0.22
MBD1-208	ENST00000398493	LEPROTL1	O95214	131 aa		13.65	□□□□□ -0.22
MBD1-208	ENST00000398493	TDRG1	Q3Y452	100 aa		13.65	□□□□□ -0.22
MBD1-208	ENST00000398493	ANXA2R	Q3ZCQ2	193 aa		13.65	□□□□□ -0.22
MBD1-208	ENST00000398493	OR10AG1	Q8NH19	301 aa		13.65	□□□□□ -0.22
MBD1-208	ENST00000398493	NOTCH3	Q9UM47	2321 aa		13.65	□□□□□ -0.22
MBD1-208	ENST00000398493		H3BVH4	76 aa		13.64	□□□□□ -0.23
MBD1-208	ENST00000398493	SPATA45	Q537H7	98 aa		13.64	□□□□□ -0.23
MBD1-208	ENST00000398493		Q6ZQT7	251 aa		13.64	□□□□□ -0.23
MBD1-208	ENST00000398493	RNF185	Q96GF1	192 aa		13.64	□□□□□ -0.23
MBD1-208	ENST00000398493	UQCR10	Q9UDW1	63 aa		13.64	□□□□□ -0.23
MBD1-208	ENST00000398493	HSPB8	Q9UJY1	196 aa		13.64	□□□□□ -0.23
MBD1-208	ENST00000398493	FAM159A	Q6UWV7	190 aa		13.64	□□□□□ -0.23
MBD1-208	ENST00000398493	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.64	□□□□□ -0.23
MBD1-208	ENST00000398493	FOXI2	Q6ZQN5	318 aa		13.64	□□□□□ -0.23
MBD1-208	ENST00000398493	DYNLRB2	Q8TF09	96 aa		13.64	□□□□□ -0.23
MBD1-208	ENST00000398493	ADAMTSL5	Q6ZMM2	481 aa		13.63	□□□□□ -0.23
MBD1-208	ENST00000398493	TRAV9-2	A0A087WT02	112 aa		13.62	□□□□□ -0.23
MBD1-208	ENST00000398493	LOC389332	A0A1B0GUA5	103 aa		13.62	□□□□□ -0.23
MBD1-208	ENST00000398493	C7orf71	A4D174	169 aa		13.62	□□□□□ -0.23
MBD1-208	ENST00000398493	SIGLEC8	Q9NYZ4	499 aa		13.62	□□□□□ -0.23
MBD1-208	ENST00000398493	PHLDA3	Q9Y5J5	127 aa		13.62	□□□□□ -0.23
MBD1-208	ENST00000398493	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.62	□□□□□ -0.23
MBD1-208	ENST00000398493	MGAM2	Q2M2H8	2515 aa		13.62	□□□□□ -0.23
MBD1-208	ENST00000398493	IFI27	P40305	119 aa	Predicted RBP	13.62	□□□□□ -0.23
MBD1-208	ENST00000398493	SNHG12	Q9BXW3	62 aa		13.62	□□□□□ -0.23
MBD1-208	ENST00000398493	MAP1LC3A	Q9H492	121 aa		13.62	□□□□□ -0.23
MBD1-208	ENST00000398493	WFDC9	Q8NEX5	89 aa		13.61	□□□□□ -0.23
MBD1-208	ENST00000398493	NPY	P01303	97 aa		13.6	□□□□□ -0.23
MBD1-208	ENST00000398493	EVI2A	P22794	236 aa		13.6	□□□□□ -0.23
MBD1-208	ENST00000398493	CDKN1B	P46527	198 aa		13.6	□□□□□ -0.23
MBD1-208	ENST00000398493	PET117	Q6UWS5	81 aa		13.6	□□□□□ -0.23
MBD1-208	ENST00000398493	LINC00469	Q8N7U9	141 aa		13.6	□□□□□ -0.23
MBD1-208	ENST00000398493	MAP1LC3C	Q9BXW4	147 aa		13.6	□□□□□ -0.23
MBD1-208	ENST00000398493	SMKR1	H3BMG3	65 aa		13.6	□□□□□ -0.23
MBD1-208	ENST00000398493	SYS1-DBNDD2	H3BUS1	97 aa		13.6	□□□□□ -0.23
MBD1-208	ENST00000398493	IGLC3	P0DOY3	106 aa		13.6	□□□□□ -0.23
MBD1-208	ENST00000398493	KIR3DS1	Q14943	382 aa		13.6	□□□□□ -0.23
MBD1-208	ENST00000398493	TRAV12-3	A0A0B4J271	114 aa		13.59	□□□□□ -0.23
MBD1-208	ENST00000398493	GNRH2	O43555	120 aa		13.59	□□□□□ -0.23
MBD1-208	ENST00000398493	NCR2	O95944	276 aa		13.59	□□□□□ -0.23
MBD1-208	ENST00000398493	SCRT2	Q9NQ03	307 aa		13.59	□□□□□ -0.23
MBD1-208	ENST00000398493		A0A1B0GV90	55 aa		13.58	□□□□□ -0.24
MBD1-208	ENST00000398493		M0R381	172 aa		13.58	□□□□□ -0.24
MBD1-208	ENST00000398493	EREG	O14944	169 aa		13.58	□□□□□ -0.24
MBD1-208	ENST00000398493	TNFRSF6B	O95407	300 aa		13.58	□□□□□ -0.24
MBD1-208	ENST00000398493	IGKV3-20	P01619	116 aa		13.58	□□□□□ -0.24
MBD1-208	ENST00000398493	NXT2	Q9NPJ8	142 aa	Known RBP	13.58	□□□□□ -0.24
MBD1-208	ENST00000398493	DNAH3	Q8TD57	4116 aa		13.58	□□□□□ -0.24
MBD1-208	ENST00000398493	NUTF2	P61970	127 aa	Known RBP	13.57	□□□□□ -0.24
MBD1-208	ENST00000398493	DEFB114	Q30KQ6	69 aa		13.57	□□□□□ -0.24
MBD1-208	ENST00000398493	SPATA12	Q7Z6I5	190 aa		13.57	□□□□□ -0.24
MBD1-208	ENST00000398493	MRAP2	Q96G30	205 aa		13.57	□□□□□ -0.24
MBD1-208	ENST00000398493	TRAV25	A0A0B4J276	109 aa		13.57	□□□□□ -0.24
MBD1-208	ENST00000398493	OR4C46	A6NHA9	309 aa		13.57	□□□□□ -0.24
MBD1-208	ENST00000398493	DEFB131A	P59861	70 aa		13.57	□□□□□ -0.24
MBD1-208	ENST00000398493	TMEM61	Q8N0U2	210 aa		13.57	□□□□□ -0.24
MBD1-208	ENST00000398493	ST20	Q9HBF5	79 aa		13.57	□□□□□ -0.24
MBD1-208	ENST00000398493	CD7	P09564	240 aa		13.56	□□□□□ -0.24
MBD1-208	ENST00000398493	IGLL1	P15814	213 aa		13.56	□□□□□ -0.24
MBD1-208	ENST00000398493	OR2K2	Q8NGT1	345 aa		13.56	□□□□□ -0.24
MBD1-208	ENST00000398493	DPH3P1	Q9H4G8	78 aa		13.56	□□□□□ -0.24
MBD1-208	ENST00000398493	RNASE3	P12724	160 aa	Known RBP	13.55	□□□□□ -0.24
MBD1-208	ENST00000398493	SPAG8	Q99932	426 aa	Predicted RBP	13.55	□□□□□ -0.24
MBD1-208	ENST00000398493	AP1S3	Q96PC3	154 aa		13.55	□□□□□ -0.24
MBD1-208	ENST00000398493	MRPS16	Q9Y3D3	137 aa	Known RBP	13.55	□□□□□ -0.24
MBD1-208	ENST00000398493	HBD	P02042	147 aa		13.54	□□□□□ -0.24
MBD1-208	ENST00000398493	SPINK13	Q1W4C9	94 aa		13.54	□□□□□ -0.24
MBD1-208	ENST00000398493	LINC01546	A6NGU7	62 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms