RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 NMUP48645 174 aa13.93□□□□□ -0.18
CHRFAM7A-202ENST00000397827 ZNF418Q8TF45 676 aaPredicted RBP13.93□□□□□ -0.18
CHRFAM7A-202ENST00000397827 OR11H12B2RN74 326 aa13.92□□□□□ -0.18
CHRFAM7A-202ENST00000397827 OR11H1Q8NG94 326 aa13.92□□□□□ -0.18
CHRFAM7A-202ENST00000397827 OR11H2Q8NH07 326 aa13.92□□□□□ -0.18
CHRFAM7A-202ENST00000397827 DPF1Q92782 380 aa13.92□□□□□ -0.18
CHRFAM7A-202ENST00000397827 USMG5Q96IX5 58 aa13.92□□□□□ -0.18
CHRFAM7A-202ENST00000397827 F6UB75 175 aa13.92□□□□□ -0.18
CHRFAM7A-202ENST00000397827 H3BVH4 76 aa13.92□□□□□ -0.18
CHRFAM7A-202ENST00000397827 LEPP41159 167 aa13.92□□□□□ -0.18
CHRFAM7A-202ENST00000397827 FXYD2P54710 66 aa13.92□□□□□ -0.18
CHRFAM7A-202ENST00000397827 SIVA1O15304 175 aa13.91□□□□□ -0.18
CHRFAM7A-202ENST00000397827 SPINK8P0C7L1 97 aa13.91□□□□□ -0.18
CHRFAM7A-202ENST00000397827 LGALS9BQ3B8N2 356 aa13.91□□□□□ -0.18
CHRFAM7A-202ENST00000397827 LGALS9CQ6DKI2 356 aa13.91□□□□□ -0.18
CHRFAM7A-202ENST00000397827 C20orf78Q9BR46 151 aa13.91□□□□□ -0.18
CHRFAM7A-202ENST00000397827 SPANXN1Q5VSR9 72 aa13.91□□□□□ -0.18
CHRFAM7A-202ENST00000397827 H3BMG7 143 aa13.9□□□□□ -0.18
CHRFAM7A-202ENST00000397827 SOCS3O14543 225 aa13.9□□□□□ -0.18
CHRFAM7A-202ENST00000397827 SRD5A1P18405 259 aa13.9□□□□□ -0.18
CHRFAM7A-202ENST00000397827 EDN2P20800 178 aa13.9□□□□□ -0.18
CHRFAM7A-202ENST00000397827 DKK2Q9UBU2 259 aa13.9□□□□□ -0.18
CHRFAM7A-202ENST00000397827 ANKRD17O75179 2603 aaKnown RBP13.9□□□□□ -0.18
CHRFAM7A-202ENST00000397827 DOPEY2Q9Y3R5 2298 aa13.89□□□□□ -0.19
CHRFAM7A-202ENST00000397827 B4DSR2 109 aa13.89□□□□□ -0.19
CHRFAM7A-202ENST00000397827 ZFAND2AQ8N6M9 145 aa13.89□□□□□ -0.19
CHRFAM7A-202ENST00000397827 OR10J6PQ8NGY7 276 aa13.89□□□□□ -0.19
CHRFAM7A-202ENST00000397827 RHPN1-AS1Q9BWJ2 59 aa13.89□□□□□ -0.19
CHRFAM7A-202ENST00000397827 FBN2P35556 2912 aa13.89□□□□□ -0.19
CHRFAM7A-202ENST00000397827 H3BUA1 57 aa13.88□□□□□ -0.19
CHRFAM7A-202ENST00000397827 HERV-K104P63124 156 aa13.88□□□□□ -0.19
CHRFAM7A-202ENST00000397827 NXT2Q9NPJ8 142 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-202ENST00000397827 LRRK2Q5S007 2527 aa13.88□□□□□ -0.19
CHRFAM7A-202ENST00000397827 IGLV1-40P01703 118 aa13.88□□□□□ -0.19
CHRFAM7A-202ENST00000397827 AMTNQ6UX39 209 aa13.88□□□□□ -0.19
CHRFAM7A-202ENST00000397827 LINC00477Q96M19 166 aa13.88□□□□□ -0.19
CHRFAM7A-202ENST00000397827 K7EMI3 77 aa13.87□□□□□ -0.19
CHRFAM7A-202ENST00000397827 MAPK1IP1LQ8NDC0 245 aa13.87□□□□□ -0.19
CHRFAM7A-202ENST00000397827 NHP2Q9NX24 153 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-202ENST00000397827 ERG28Q9UKR5 140 aa13.87□□□□□ -0.19
CHRFAM7A-202ENST00000397827 ZNF462Q96JM2 2506 aa13.87□□□□□ -0.19
CHRFAM7A-202ENST00000397827 MT-ATP8P03928 68 aa13.87□□□□□ -0.19
CHRFAM7A-202ENST00000397827 FCER1GP30273 86 aa13.87□□□□□ -0.19
CHRFAM7A-202ENST00000397827 TMEM158Q8WZ71 300 aa13.87□□□□□ -0.19
CHRFAM7A-202ENST00000397827 BRI3O95415 125 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 C10orf99Q6UWK7 81 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 CYSLTR1Q9Y271 337 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 LENEPQ9Y5L5 61 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 IGLV2-18A0A075B6J9 118 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 LINC01546A6NGU7 62 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 M0R381 172 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 OVOL1O14753 267 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 IGHV4-59P01825 116 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 NRACQ8N912 160 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 SYT8Q8NBV8 401 aa13.86□□□□□ -0.19
CHRFAM7A-202ENST00000397827 Q8N8P6 123 aa13.85□□□□□ -0.19
CHRFAM7A-202ENST00000397827 PRB1P04280 392 aa13.85□□□□□ -0.19
CHRFAM7A-202ENST00000397827 RNASE4P34096 147 aaKnown RBP13.85□□□□□ -0.19
CHRFAM7A-202ENST00000397827 GAGE13Q4V321 117 aa13.85□□□□□ -0.19
CHRFAM7A-202ENST00000397827 PHLDA1Q8WV24 401 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-202ENST00000397827 DAZ1Q9NQZ3 744 aaKnown RBP13.85□□□□□ -0.19
CHRFAM7A-202ENST00000397827 B5MCH6 92 aa13.84□□□□□ -0.19
CHRFAM7A-202ENST00000397827 CFHR3Q02985 330 aa13.84□□□□□ -0.19
CHRFAM7A-202ENST00000397827 DEFB112Q30KQ8 113 aa13.84□□□□□ -0.19
CHRFAM7A-202ENST00000397827 IGHV4-4A0A075B6R2 117 aa13.84□□□□□ -0.19
CHRFAM7A-202ENST00000397827 TRAV21A0A0B4J279 112 aa13.84□□□□□ -0.19
CHRFAM7A-202ENST00000397827 TRBV7-9A0A0J9YWB2 115 aa13.84□□□□□ -0.19
CHRFAM7A-202ENST00000397827 PRSS1P07477 247 aa13.84□□□□□ -0.19
CHRFAM7A-202ENST00000397827 ANXA2RQ3ZCQ2 193 aa13.84□□□□□ -0.19
CHRFAM7A-202ENST00000397827 CDIP1Q9H305 208 aa13.84□□□□□ -0.19
CHRFAM7A-202ENST00000397827 E9PLD3 99 aa13.83□□□□□ -0.19
CHRFAM7A-202ENST00000397827 S100A4P26447 101 aaKnown RBP13.83□□□□□ -0.19
CHRFAM7A-202ENST00000397827 USP24Q9UPU5 2620 aa13.83□□□□□ -0.2
CHRFAM7A-202ENST00000397827 A0A1B0GWB2 263 aa13.83□□□□□ -0.2
CHRFAM7A-202ENST00000397827 GAGE5Q13069 117 aa13.83□□□□□ -0.2
CHRFAM7A-202ENST00000397827 GAGE6Q13070 117 aa13.83□□□□□ -0.2
CHRFAM7A-202ENST00000397827 ANAPC13Q9BS18 74 aa13.83□□□□□ -0.2
CHRFAM7A-202ENST00000397827 TTTY13Q9BZ97 58 aa13.83□□□□□ -0.2
CHRFAM7A-202ENST00000397827 IGLL5B9A064 214 aa13.82□□□□□ -0.2
CHRFAM7A-202ENST00000397827 GNRH2O43555 120 aa13.82□□□□□ -0.2
CHRFAM7A-202ENST00000397827 PTPN13Q12923 2485 aa13.82□□□□□ -0.2
CHRFAM7A-202ENST00000397827 APOMO95445 188 aa13.82□□□□□ -0.2
CHRFAM7A-202ENST00000397827 ODF1Q14990 250 aa13.82□□□□□ -0.2
CHRFAM7A-202ENST00000397827 MXRA5Q9NR99 2828 aa13.81□□□□□ -0.2
CHRFAM7A-202ENST00000397827 FAM19A4Q96LR4 140 aa13.81□□□□□ -0.2
CHRFAM7A-202ENST00000397827 FOXC2Q99958 501 aa13.81□□□□□ -0.2
CHRFAM7A-202ENST00000397827 ASIPP42127 132 aa13.8□□□□□ -0.2
CHRFAM7A-202ENST00000397827 XGP55808 180 aa13.8□□□□□ -0.2
CHRFAM7A-202ENST00000397827 C14orf178Q8N769 122 aaPredicted RBP13.8□□□□□ -0.2
CHRFAM7A-202ENST00000397827 CHAC1Q9BUX1 264 aa13.8□□□□□ -0.2
CHRFAM7A-202ENST00000397827 PHLDA3Q9Y5J5 127 aa13.8□□□□□ -0.2
CHRFAM7A-202ENST00000397827 PSMB8P28062 276 aa13.8□□□□□ -0.2
CHRFAM7A-202ENST00000397827 LAGE3Q14657 143 aa13.8□□□□□ -0.2
CHRFAM7A-202ENST00000397827 ABCA12Q86UK0 2595 aa13.8□□□□□ -0.2
CHRFAM7A-202ENST00000397827 TGFAP01135 160 aa13.79□□□□□ -0.2
CHRFAM7A-202ENST00000397827 Q6ZUT4 128 aa13.79□□□□□ -0.2
CHRFAM7A-202ENST00000397827 PRO0461Q9UI25 63 aa13.79□□□□□ -0.2
CHRFAM7A-202ENST00000397827 FOXI1Q12951 378 aa13.79□□□□□ -0.2
CHRFAM7A-202ENST00000397827 LINC01356Q8N9X3 169 aa13.79□□□□□ -0.2
CHRFAM7A-202ENST00000397827 FAM110AQ9BQ89 295 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms