RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 C1orf140Q5VVS0 124 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 AAED1Q7RTV5 226 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 DEFB119Q8N690 84 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 RPS4Y2Q8TD47 263 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 ZNF414Q96IQ9 312 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 MCEEQ96PE7 176 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 A0A1B0GUV1 79 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 C9JCJ5 164 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 M0R378 163 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 UBE2L6O14933 153 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 NUPR1O60356 82 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 IGHV3-7P01780 117 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 CFC1BP0CG36 223 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 UBE2G1P62253 170 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 NMSQ5H8A3 153 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 PSMG4Q5JS54 123 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 SCXQ7RTU7 201 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 ORMDL3Q8N138 153 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 Q8N7P7 452 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 CMC2Q9NRP2 79 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 PCSK5Q92824 1860 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 TRAV13-1A0A0B4J241 112 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 TRAV1-1A0A0B4J248 108 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 OOSP1A8MZH6 123 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 BMPR1BO00238 502 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 IGHV3-13P01766 116 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 COX8AP10176 69 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 SNRPFP62306 86 aaKnown RBP4.75□□□□□ -1.65
SMCO1-201ENST00000397537 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 C12orf73Q69YU5 71 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 TRAPPC6BQ86SZ2 158 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 LINC00311Q8N616 119 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 OR8B3Q8NGG8 313 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 OR10AC1Q8NH08 325 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
SMCO1-201ENST00000397537 NYNRINQ9P2P1 1898 aaKnown RBP4.75□□□□□ -1.65
SMCO1-201ENST00000397537 LOC107986453A0A1B0GWG9 222 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 GRIFINA4D1Z8 144 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 M0R129 80 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 HCRTO43612 131 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 CD7P09564 240 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 CBLN1P23435 193 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 IL17AQ16552 155 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 SH2D6Q7Z4S9 175 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 TEN1Q86WV5 123 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 Q8N377 158 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 FAM213BQ8TBF2 198 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 LINC00479Q96M42 142 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 OR8B2Q96RD0 313 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 CKLFQ9UBR5 152 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 PRO0461Q9UI25 63 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 DNAJC15Q9Y5T4 150 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 CCDC168Q8NDH2 2452 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 DSPPQ9NZW4 1301 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 KNL1Q8NG31 2342 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 TRBV7-6A0A0J9YX20 115 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 FAM24AA6NFZ4 105 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 PYYP10082 97 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 ZNF32P17041 273 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 LINC00205P59089 165 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 EBI3Q14213 229 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 RNASE13Q5GAN3 156 aaKnown RBP4.74□□□□□ -1.65
SMCO1-201ENST00000397537 C22orf39Q6P5X5 142 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 CLDND2Q8NHS1 167 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 FAM103A1Q9BTL3 118 aaKnown RBP4.74□□□□□ -1.65
SMCO1-201ENST00000397537 C16orf95Q9H693 158 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 TP53TG3Q9ULZ0 132 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 MOB4Q9Y3A3 225 aa4.74□□□□□ -1.65
SMCO1-201ENST00000397537 A0A0D9SEW6 157 aa4.73□□□□□ -1.65
SMCO1-201ENST00000397537 IGLV1-44P01699 117 aa4.73□□□□□ -1.65
SMCO1-201ENST00000397537 COX7CP15954 63 aa4.73□□□□□ -1.65
SMCO1-201ENST00000397537 MPV17P39210 176 aa4.73□□□□□ -1.65
SMCO1-201ENST00000397537 B9D2Q9BPU9 175 aa4.73□□□□□ -1.65
SMCO1-201ENST00000397537 CELA1Q9UNI1 258 aa4.73□□□□□ -1.65
SMCO1-201ENST00000397537 SDK2Q58EX2 2172 aa4.73□□□□□ -1.65
SMCO1-201ENST00000397537 TET2Q6N021 2002 aaPredicted RBP4.72□□□□□ -1.65
SMCO1-201ENST00000397537 IGHV3-66A0A0C4DH42 116 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 TRBV7-7A0A0K0K1E9 115 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 A8MWL6 223 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 SRRM5B3KS81 715 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 BUB1B-PAK6H3BSN5 160 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 SDCBPO00560 298 aaPredicted RBP4.72□□□□□ -1.65
SMCO1-201ENST00000397537 MSRB3Q8IXL7 192 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 PLA2G12AQ9BZM1 189 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 AGPAT4-IT1Q9H0P7 198 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 ARL2-SNX15V9GYD0 113 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 STAB1Q9NY15 2570 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 RAI1Q7Z5J4 1906 aaPredicted RBP4.72□□□□□ -1.65
SMCO1-201ENST00000397537 IGLV1-50A0A075B6I6 118 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 TRAV12-2A0A075B6T6 113 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 A6NIN4 97 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 A8MWV9 139 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 RBP4P02753 201 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 ZNF791Q3KP31 576 aaPredicted RBP4.72□□□□□ -1.65
SMCO1-201ENST00000397537 HDHD3Q9BSH5 251 aaPredicted RBP4.72□□□□□ -1.65
SMCO1-201ENST00000397537 SHANK2-AS3Q9BTD1 123 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 TNFRSF19Q9NS68 423 aa4.72□□□□□ -1.65
SMCO1-201ENST00000397537 RP1L1Q8IWN7 2480 aaPredicted RBP4.71□□□□□ -1.65
SMCO1-201ENST00000397537 CSMD2Q7Z408 3487 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms