RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 IGHV7-4-1A0A0J9YVY3 117 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 SFTA2Q6UW10 78 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 CELSR2Q9HCU4 2923 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 HECTD1Q9ULT8 2610 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 A0A096LNJ9 63 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 TMEM238C9JI98 176 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 IGKCP01834 107 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 IGHG2P01859 326 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 COX8AP10176 69 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 GAGE10A6NGK3 116 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 NDUFS8O00217 210 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 JMJD8Q96S16 334 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 K7EP13 123 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 SNRPD3P62318 126 aaKnown RBP7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 SRSF1Q07955 248 aaKnown RBP eCLIP7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 HIST2H2BCQ6DN03 193 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 MEGF9Q9H1U4 602 aa7.93□□□□□ -1.14
CPSF1P1-201ENST00000397477 A6NDX4 124 aa7.92□□□□□ -1.14
CPSF1P1-201ENST00000397477 SCGB1D4Q6XE38 83 aa7.92□□□□□ -1.14
CPSF1P1-201ENST00000397477 LINC01356Q8N9X3 169 aa7.92□□□□□ -1.14
CPSF1P1-201ENST00000397477 HOXA3O43365 443 aaPredicted RBP7.92□□□□□ -1.14
CPSF1P1-201ENST00000397477 DPM2O94777 84 aa7.92□□□□□ -1.14
CPSF1P1-201ENST00000397477 TMEM190Q8WZ59 177 aa7.92□□□□□ -1.14
CPSF1P1-201ENST00000397477 CSTL1Q9H114 145 aa7.92□□□□□ -1.14
CPSF1P1-201ENST00000397477 SMPXQ9UHP9 88 aa7.92□□□□□ -1.14
CPSF1P1-201ENST00000397477 A6NDN8 102 aa7.92□□□□□ -1.14
CPSF1P1-201ENST00000397477 CRXO43186 299 aaPredicted RBP7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 ORAOV1Q8WV07 137 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 CST9LQ9H4G1 147 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 NHP2Q9NX24 153 aaKnown RBP7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 RBAKDNA6NC62 111 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 KNCNA6PVL3 124 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 ATP5LO75964 103 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 KRTAP10-9P60411 292 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 LGALS9BQ3B8N2 356 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 OCIAD2Q56VL3 154 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 LGALS9CQ6DKI2 356 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 C9orf47Q6ZRZ4 202 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 Q8N8P6 123 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 HIST1H4GQ99525 98 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 DPH3P1Q9H4G8 78 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 TEX15Q9BXT5 2789 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 CD5LO43866 347 aa7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 CD300EQ496F6 205 aaPredicted RBP7.91□□□□□ -1.14
CPSF1P1-201ENST00000397477 K7ERJ3 54 aa7.9□□□□□ -1.14
CPSF1P1-201ENST00000397477 SUMO2P61956 95 aaKnown RBP7.9□□□□□ -1.14
CPSF1P1-201ENST00000397477 DYNLRB2Q8TF09 96 aa7.9□□□□□ -1.14
CPSF1P1-201ENST00000397477 CHD6Q8TD26 2715 aa7.9□□□□□ -1.14
CPSF1P1-201ENST00000397477 IGHV3-64A0A075B6Q5 118 aa7.9□□□□□ -1.14
CPSF1P1-201ENST00000397477 PRM2P04554 102 aa7.9□□□□□ -1.14
CPSF1P1-201ENST00000397477 MRPL52Q86TS9 123 aaKnown RBP7.9□□□□□ -1.14
CPSF1P1-201ENST00000397477 CSMD2Q7Z408 3487 aa7.9□□□□□ -1.15
CPSF1P1-201ENST00000397477 IGKV2D-26A0A0A0MRZ7 120 aa7.9□□□□□ -1.15
CPSF1P1-201ENST00000397477 ZFAND2AQ8N6M9 145 aa7.9□□□□□ -1.15
CPSF1P1-201ENST00000397477 Q96MF0 132 aa7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 TAX1BP3O14907 124 aa7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 SLURP1P55000 103 aa7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 TMEM170BQ5T4T1 132 aa7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 SMIM2Q9BVW6 85 aa7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 OR11H12B2RN74 326 aa7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 DEFB131AP59861 70 aa7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 RPL24P83731 157 aaKnown RBP7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 SRSF9Q13242 221 aaKnown RBP eCLIP7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 C2orf66Q6UXQ4 117 aa7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 OR11H1Q8NG94 326 aa7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 OR11H2Q8NH07 326 aa7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 CHTOPQ9Y3Y2 248 aaKnown RBP7.89□□□□□ -1.15
CPSF1P1-201ENST00000397477 IGHV4OR15-8A0A075B7B6 117 aa7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 A0A087WW49 117 aa7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 C18orf65Q6ZTR6 163 aa7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 U3KQK5 164 aa7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 HOXD3P31249 432 aaPredicted RBP7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 TCTEX1D4Q5JR98 221 aa7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 GPHB5Q86YW7 130 aa7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 KIR2DL4Q99706 377 aa7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 FLNAP21333 2647 aaKnown RBP7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 VPS13CQ709C8 3753 aa7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 ODF1Q14990 250 aa7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 BBC3Q96PG8 261 aaPredicted RBP7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 MDFICQ9P1T7 246 aa7.88□□□□□ -1.15
CPSF1P1-201ENST00000397477 SLC25A16P16260 332 aa7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 GATD1Q8NB37 220 aa7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 CYSLTR1Q9Y271 337 aa7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 RPL39P62891 51 aaKnown RBP7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 HSD52Q0P140 79 aa7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 ZNF876PQ49A33 203 aa7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 C2orf91Q6ZV80 131 aa7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 MTURNQ8N3F0 131 aa7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 DEFB125Q8N687 156 aa7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 CHAC1Q9BUX1 264 aa7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 U3KQE9 123 aa7.87□□□□□ -1.15
CPSF1P1-201ENST00000397477 ORMDL2Q53FV1 153 aa7.86□□□□□ -1.15
CPSF1P1-201ENST00000397477 MRPL53Q96EL3 112 aaKnown RBP7.86□□□□□ -1.15
CPSF1P1-201ENST00000397477 CLUHP3Q96NS8 147 aa7.86□□□□□ -1.15
CPSF1P1-201ENST00000397477 TP53TG1Q9Y2A0 90 aa7.86□□□□□ -1.15
CPSF1P1-201ENST00000397477 GAGE12BA1L429 117 aa7.86□□□□□ -1.15
CPSF1P1-201ENST00000397477 SAP30O75446 220 aa7.86□□□□□ -1.15
CPSF1P1-201ENST00000397477 SMIM13P0DJ93 91 aa7.86□□□□□ -1.15
CPSF1P1-201ENST00000397477 RASL10AQ92737 203 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms