RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CCL18P55774 89 aa17.71■□□□□ 0.43
TSPAN4-207ENST00000397411 SACSQ9NZJ4 4579 aa17.71■□□□□ 0.42
TSPAN4-207ENST00000397411 ARMS2P0C7Q2 107 aa17.7■□□□□ 0.42
TSPAN4-207ENST00000397411 TEX261Q6UWH6 196 aa17.7■□□□□ 0.42
TSPAN4-207ENST00000397411 SYT8Q8NBV8 401 aa17.7■□□□□ 0.42
TSPAN4-207ENST00000397411 PTH2Q96A98 100 aa17.7■□□□□ 0.42
TSPAN4-207ENST00000397411 VSIG2Q96IQ7 327 aa17.7■□□□□ 0.42
TSPAN4-207ENST00000397411 IL36BQ9NZH7 164 aa17.7■□□□□ 0.42
TSPAN4-207ENST00000397411 CRYBA4P53673 196 aa17.69■□□□□ 0.42
TSPAN4-207ENST00000397411 ZNF506Q5JVG8 444 aa17.69■□□□□ 0.42
TSPAN4-207ENST00000397411 DNLZQ5SXM8 178 aa17.69■□□□□ 0.42
TSPAN4-207ENST00000397411 BIN3Q9NQY0 253 aa17.69■□□□□ 0.42
TSPAN4-207ENST00000397411 PHLDA3Q9Y5J5 127 aa17.69■□□□□ 0.42
TSPAN4-207ENST00000397411 RS1O15537 224 aa17.68■□□□□ 0.42
TSPAN4-207ENST00000397411 TOR2AQ5JU69 321 aa17.68■□□□□ 0.42
TSPAN4-207ENST00000397411 ICOSQ9Y6W8 199 aa17.68■□□□□ 0.42
TSPAN4-207ENST00000397411 DNAH1Q9P2D7 4330 aa17.67■□□□□ 0.42
TSPAN4-207ENST00000397411 CEBPGP53567 150 aa17.67■□□□□ 0.42
TSPAN4-207ENST00000397411 SMIM12Q96EX1 92 aa17.67■□□□□ 0.42
TSPAN4-207ENST00000397411 CIDEAO60543 219 aa17.66■□□□□ 0.42
TSPAN4-207ENST00000397411 RPL19P84098 196 aaKnown RBP17.66■□□□□ 0.42
TSPAN4-207ENST00000397411 CFAP126Q5VTH2 177 aa17.66■□□□□ 0.42
TSPAN4-207ENST00000397411 PCNPQ8WW12 178 aaKnown RBP17.66■□□□□ 0.42
TSPAN4-207ENST00000397411 RYR3Q15413 4870 aa17.66■□□□□ 0.42
TSPAN4-207ENST00000397411 RYR2Q92736 4967 aa17.66■□□□□ 0.42
TSPAN4-207ENST00000397411 IGHV3-73A0A0B4J1V6 119 aa17.65■□□□□ 0.42
TSPAN4-207ENST00000397411 TMEM250H0YL14 139 aa17.65■□□□□ 0.42
TSPAN4-207ENST00000397411 A8MWV9 139 aa17.64■□□□□ 0.41
TSPAN4-207ENST00000397411 IGLV2-8P01709 118 aa17.64■□□□□ 0.41
TSPAN4-207ENST00000397411 FAM3BP58499 235 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-207ENST00000397411 MRPL23Q16540 153 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-207ENST00000397411 FAM210AQ96ND0 272 aa17.64■□□□□ 0.41
TSPAN4-207ENST00000397411 A0A096LPF7 62 aa17.63■□□□□ 0.41
TSPAN4-207ENST00000397411 M0R381 172 aa17.63■□□□□ 0.41
TSPAN4-207ENST00000397411 PIK3CD-AS1Q5SR53 167 aa17.63■□□□□ 0.41
TSPAN4-207ENST00000397411 DMRTA1Q5VZB9 504 aa17.63■□□□□ 0.41
TSPAN4-207ENST00000397411 PARLQ9H300 379 aa17.63■□□□□ 0.41
TSPAN4-207ENST00000397411 GYPEP15421 78 aa17.62■□□□□ 0.41
TSPAN4-207ENST00000397411 LINC00588Q9Y4M8 146 aa17.62■□□□□ 0.41
TSPAN4-207ENST00000397411 TRBV20OR9-2A0A075B6H5 130 aa17.61■□□□□ 0.41
TSPAN4-207ENST00000397411 IGLV2-18A0A075B6J9 118 aa17.61■□□□□ 0.41
TSPAN4-207ENST00000397411 P01737 135 aa17.61■□□□□ 0.41
TSPAN4-207ENST00000397411 CXCL1P09341 107 aa17.61■□□□□ 0.41
TSPAN4-207ENST00000397411 RPS20P60866 119 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-207ENST00000397411 ESRGQ1W209 222 aa17.61■□□□□ 0.41
TSPAN4-207ENST00000397411 ZNF575Q86XF7 245 aa17.61■□□□□ 0.41
TSPAN4-207ENST00000397411 ZFP82Q8N141 532 aa17.61■□□□□ 0.41
TSPAN4-207ENST00000397411 OR2D3Q8NGH3 330 aa17.61■□□□□ 0.41
TSPAN4-207ENST00000397411 HYDINQ4G0P3 5121 aa17.6■□□□□ 0.41
TSPAN4-207ENST00000397411 M0R2N4 97 aa17.6■□□□□ 0.41
TSPAN4-207ENST00000397411 NDUFS6O75380 124 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-207ENST00000397411 MED14OSP0DP75 135 aa17.6■□□□□ 0.41
TSPAN4-207ENST00000397411 GATA1P15976 413 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-207ENST00000397411 SRIP30626 198 aa17.6■□□□□ 0.41
TSPAN4-207ENST00000397411 PRADC1Q9BSG0 188 aa17.6■□□□□ 0.41
TSPAN4-207ENST00000397411 SCRT2Q9NQ03 307 aa17.6■□□□□ 0.41
TSPAN4-207ENST00000397411 XKRY2A2RUG3 117 aa17.59■□□□□ 0.41
TSPAN4-207ENST00000397411 OCC1Q8TAD7 63 aa17.59■□□□□ 0.41
TSPAN4-207ENST00000397411 NEGR1Q7Z3B1 354 aa17.58■□□□□ 0.4
TSPAN4-207ENST00000397411 JPT2Q9H910 190 aa17.58■□□□□ 0.4
TSPAN4-207ENST00000397411 C19orf71A6NCJ1 209 aa17.57■□□□□ 0.4
TSPAN4-207ENST00000397411 K7EQD1 137 aa17.57■□□□□ 0.4
TSPAN4-207ENST00000397411 SSTP61278 116 aa17.57■□□□□ 0.4
TSPAN4-207ENST00000397411 SPANXN1Q5VSR9 72 aa17.57■□□□□ 0.4
TSPAN4-207ENST00000397411 ZFP2Q6ZN57 461 aa17.57■□□□□ 0.4
TSPAN4-207ENST00000397411 TPPP3Q9BW30 176 aa17.57■□□□□ 0.4
TSPAN4-207ENST00000397411 RAB14P61106 215 aa17.56■□□□□ 0.4
TSPAN4-207ENST00000397411 FAM74A4Q5TZK3 123 aa17.56■□□□□ 0.4
TSPAN4-207ENST00000397411 SLC25A29Q8N8R3 303 aa17.56■□□□□ 0.4
TSPAN4-207ENST00000397411 TRBV6-4A0A1B0GX49 114 aa17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 RHODO00212 210 aa17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 SRP19P09132 144 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 GZMBP10144 247 aa17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 PEA15Q15121 130 aa17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 RHOHQ15669 191 aa17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 NUDT10Q8NFP7 164 aa17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 NUDT11Q96G61 164 aa17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 SFRP2Q96HF1 295 aa17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 SMIM7Q9BQ49 75 aa17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 SAMD10Q9BYL1 202 aa17.55■□□□□ 0.4
TSPAN4-207ENST00000397411 VPS13DQ5THJ4 4388 aa17.54■□□□□ 0.4
TSPAN4-207ENST00000397411 MUC21A0A0G2JKD1 596 aa17.54■□□□□ 0.4
TSPAN4-207ENST00000397411 LOC100131303A0A0U1RQF7 123 aa17.54■□□□□ 0.4
TSPAN4-207ENST00000397411 MUC21A0A140T8X8 626 aa17.54■□□□□ 0.4
TSPAN4-207ENST00000397411 ZNF727A8MUV8 499 aa17.54■□□□□ 0.4
TSPAN4-207ENST00000397411 OR5AL1P0C617 328 aa17.54■□□□□ 0.4
TSPAN4-207ENST00000397411 SH2D6Q7Z4S9 175 aa17.54■□□□□ 0.4
TSPAN4-207ENST00000397411 OR10AG1Q8NH19 301 aa17.54■□□□□ 0.4
TSPAN4-207ENST00000397411 ZNRF2Q8NHG8 242 aa17.54■□□□□ 0.4
TSPAN4-207ENST00000397411 MRPS16Q9Y3D3 137 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-207ENST00000397411 A0A087WWL8 130 aa17.53■□□□□ 0.4
TSPAN4-207ENST00000397411 LYPD5Q6UWN5 251 aa17.53■□□□□ 0.4
TSPAN4-207ENST00000397411 FER1L6-AS1Q8NA97 138 aa17.53■□□□□ 0.4
TSPAN4-207ENST00000397411 SSBP4Q9BWG4 385 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-207ENST00000397411 Q9H8V8 135 aa17.53■□□□□ 0.4
TSPAN4-207ENST00000397411 K7EN84 100 aa17.52■□□□□ 0.4
TSPAN4-207ENST00000397411 SNAI2O43623 268 aa17.52■□□□□ 0.4
TSPAN4-207ENST00000397411 RNASE7Q9H1E1 156 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-207ENST00000397411 Q6ZSN1 163 aa17.5■□□□□ 0.39
TSPAN4-207ENST00000397411 SMDT1Q9H4I9 107 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms