RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 SMIM9A6NGZ8 99 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 GNRH2O43555 120 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 SPINK4O60575 86 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 NTF3P20783 257 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 RAB4BP61018 213 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 Q6ZQT7 251 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 CSNK1G2-AS1Q8NCQ2 148 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 FRZBQ92765 325 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 TMEM191AQ9H0A3 160 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 GIG44P09565 113 aaPredicted RBP13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 RBMY1A1P0DJD3 496 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 RBMY1CP0DJD4 496 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 CAMPP49913 170 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 RBMY1FQ15415 496 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 ZNF705AQ6ZN79 300 aaPredicted RBP13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 C1orf158Q8N1D5 194 aa13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 TMEM263Q8WUH6 116 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-204ENST00000397404 APCSP02743 223 aa13.86□□□□□ -0.19
TSPAN4-204ENST00000397404 TRGC2P03986 189 aa13.86□□□□□ -0.19
TSPAN4-204ENST00000397404 DMRTA1Q5VZB9 504 aa13.86□□□□□ -0.19
TSPAN4-204ENST00000397404 MRPL18Q9H0U6 180 aaKnown RBP13.86□□□□□ -0.19
TSPAN4-204ENST00000397404 CMYA5Q8N3K9 4069 aa13.86□□□□□ -0.19
TSPAN4-204ENST00000397404 IGHV4-30-4P0DP06 118 aa13.85□□□□□ -0.19
TSPAN4-204ENST00000397404 C16orf74Q96GX8 76 aa13.85□□□□□ -0.19
TSPAN4-204ENST00000397404 AP1S3Q96PC3 154 aa13.85□□□□□ -0.19
TSPAN4-204ENST00000397404 KRTAP10-11P60412 298 aa13.84□□□□□ -0.19
TSPAN4-204ENST00000397404 FABP9Q0Z7S8 132 aa13.84□□□□□ -0.19
TSPAN4-204ENST00000397404 KPRPQ5T749 579 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-204ENST00000397404 Q6ZWC4 215 aa13.84□□□□□ -0.19
TSPAN4-204ENST00000397404 OR10AG1Q8NH19 301 aa13.84□□□□□ -0.19
TSPAN4-204ENST00000397404 PKD1L1Q8TDX9 2849 aa13.83□□□□□ -0.2
TSPAN4-204ENST00000397404 M0R2P5 195 aa13.82□□□□□ -0.2
TSPAN4-204ENST00000397404 PHOX2AO14813 284 aa13.82□□□□□ -0.2
TSPAN4-204ENST00000397404 PPBPP02775 128 aa13.82□□□□□ -0.2
TSPAN4-204ENST00000397404 RRN3P1Q2M238 152 aa13.82□□□□□ -0.2
TSPAN4-204ENST00000397404 G3V4G9 280 aa13.81□□□□□ -0.2
TSPAN4-204ENST00000397404 FAM104BQ5XKR9 115 aa13.81□□□□□ -0.2
TSPAN4-204ENST00000397404 RNASE8Q8TDE3 154 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-204ENST00000397404 MDFICQ9P1T7 246 aa13.81□□□□□ -0.2
TSPAN4-204ENST00000397404 SMIM17P0DL12 118 aa13.8□□□□□ -0.2
TSPAN4-204ENST00000397404 LGALS9BQ3B8N2 356 aa13.8□□□□□ -0.2
TSPAN4-204ENST00000397404 C11orf72Q8NBR9 251 aa13.8□□□□□ -0.2
TSPAN4-204ENST00000397404 RCHY1Q96PM5 261 aa13.8□□□□□ -0.2
TSPAN4-204ENST00000397404 LAMTOR2Q9Y2Q5 125 aa13.8□□□□□ -0.2
TSPAN4-204ENST00000397404 M0R381 172 aa13.8□□□□□ -0.2
TSPAN4-204ENST00000397404 HTN1P15515 57 aa13.8□□□□□ -0.2
TSPAN4-204ENST00000397404 DAZ2Q13117 558 aaKnown RBP13.8□□□□□ -0.2
TSPAN4-204ENST00000397404 DPH3P1Q9H4G8 78 aa13.8□□□□□ -0.2
TSPAN4-204ENST00000397404 TP53TG1Q9Y2A0 90 aa13.8□□□□□ -0.2
TSPAN4-204ENST00000397404 A8MWV9 139 aa13.79□□□□□ -0.2
TSPAN4-204ENST00000397404 CIDEAO60543 219 aa13.79□□□□□ -0.2
TSPAN4-204ENST00000397404 PPP1R17O96001 155 aa13.79□□□□□ -0.2
TSPAN4-204ENST00000397404 SLAQ13239 276 aa13.79□□□□□ -0.2
TSPAN4-204ENST00000397404 TIMM8BQ9Y5J9 83 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-204ENST00000397404 IGHV3OR16-12A0A075B7B8 117 aa13.78□□□□□ -0.2
TSPAN4-204ENST00000397404 S100A6P06703 90 aa13.78□□□□□ -0.2
TSPAN4-204ENST00000397404 ZNF876PQ49A33 203 aa13.78□□□□□ -0.2
TSPAN4-204ENST00000397404 IL17DQ8TAD2 202 aa13.78□□□□□ -0.2
TSPAN4-204ENST00000397404 DNAH3Q8TD57 4116 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST1H2BKO60814 126 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST1H2BJP06899 126 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 FRMD6-AS1P0C7T7 363 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST1H2BOP23527 126 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST1H2BBP33778 126 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST1H2BDP58876 126 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST1H2BCP62807 126 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST2H2BEQ16778 126 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 OR10J3Q5JRS4 329 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 RASL10AQ92737 203 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST1H2BHQ93079 126 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 MRAP2Q96G30 205 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST1H2BNQ99877 126 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 HIST1H2BMQ99879 126 aa13.77□□□□□ -0.21
TSPAN4-204ENST00000397404 ORMDL3Q8N138 153 aa13.76□□□□□ -0.21
TSPAN4-204ENST00000397404 GSN-AS1Q9NRJ2 163 aa13.76□□□□□ -0.21
TSPAN4-204ENST00000397404 RHODO00212 210 aa13.75□□□□□ -0.21
TSPAN4-204ENST00000397404 MIFP14174 115 aa13.75□□□□□ -0.21
TSPAN4-204ENST00000397404 POM121L12Q8N7R1 296 aa13.75□□□□□ -0.21
TSPAN4-204ENST00000397404 RNF183Q96D59 192 aa13.75□□□□□ -0.21
TSPAN4-204ENST00000397404 OVOL2Q9BRP0 275 aa13.75□□□□□ -0.21
TSPAN4-204ENST00000397404 MSRB1Q9NZV6 116 aa13.75□□□□□ -0.21
TSPAN4-204ENST00000397404 U3KQK5 164 aa13.75□□□□□ -0.21
TSPAN4-204ENST00000397404 MUC21A0A0G2JKD1 596 aa13.74□□□□□ -0.21
TSPAN4-204ENST00000397404 MUC21A0A140T8X8 626 aa13.74□□□□□ -0.21
TSPAN4-204ENST00000397404 SPRY2O43597 315 aa13.74□□□□□ -0.21
TSPAN4-204ENST00000397404 RAB4AP20338 218 aa13.74□□□□□ -0.21
TSPAN4-204ENST00000397404 EVI2AP22794 236 aa13.74□□□□□ -0.21
TSPAN4-204ENST00000397404 Q0VG73 95 aa13.74□□□□□ -0.21
TSPAN4-204ENST00000397404 COA6Q5JTJ3 125 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-204ENST00000397404 AMN1Q8IY45 258 aa13.74□□□□□ -0.21
TSPAN4-204ENST00000397404 ALKBH7Q9BT30 221 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-204ENST00000397404 TMA7Q9Y2S6 64 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-204ENST00000397404 SRIP30626 198 aa13.73□□□□□ -0.21
TSPAN4-204ENST00000397404 CKS2P33552 79 aa13.73□□□□□ -0.21
TSPAN4-204ENST00000397404 SSTP61278 116 aa13.73□□□□□ -0.21
TSPAN4-204ENST00000397404 MRPL51Q4U2R6 128 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-204ENST00000397404 ZFP2Q6ZN57 461 aa13.73□□□□□ -0.21
TSPAN4-204ENST00000397404 MGAM2Q2M2H8 2515 aa13.72□□□□□ -0.21
TSPAN4-204ENST00000397404 TEX48A0A1B0GUV7 120 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms