RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 Q8N9W7 124 aa18.3■□□□□ 0.52
CSNK1E-203ENST00000396832 KLHL30-AS1Q8NEE0 82 aa18.29■□□□□ 0.52
CSNK1E-203ENST00000396832 PRSS29PA6NIE9 313 aa18.29■□□□□ 0.52
CSNK1E-203ENST00000396832 BAALCQ8WXS3 180 aa18.29■□□□□ 0.52
CSNK1E-203ENST00000396832 MSRB2Q9Y3D2 182 aa18.29■□□□□ 0.52
CSNK1E-203ENST00000396832 SCGB2A1O75556 95 aa18.28■□□□□ 0.52
CSNK1E-203ENST00000396832 CCDC140Q96MF4 163 aa18.28■□□□□ 0.52
CSNK1E-203ENST00000396832 M0R381 172 aa18.28■□□□□ 0.52
CSNK1E-203ENST00000396832 TCL1BO95988 128 aa18.28■□□□□ 0.52
CSNK1E-203ENST00000396832 CD7P09564 240 aa18.28■□□□□ 0.52
CSNK1E-203ENST00000396832 PRR9Q5T870 116 aa18.28■□□□□ 0.52
CSNK1E-203ENST00000396832 IGKV3-7A0A075B6H7 116 aa18.27■□□□□ 0.52
CSNK1E-203ENST00000396832 IGHV4-4A0A075B6R2 117 aa18.27■□□□□ 0.52
CSNK1E-203ENST00000396832 CLPSL1A2RUU4 121 aa18.27■□□□□ 0.52
CSNK1E-203ENST00000396832 SLC50A1Q9BRV3 221 aa18.27■□□□□ 0.52
CSNK1E-203ENST00000396832 RASL10AQ92737 203 aa18.27■□□□□ 0.51
CSNK1E-203ENST00000396832 HIF1ANQ9NWT6 349 aa18.27■□□□□ 0.51
CSNK1E-203ENST00000396832 COX6B1P14854 86 aa18.26■□□□□ 0.51
CSNK1E-203ENST00000396832 SUMO2P61956 95 aaKnown RBP18.26■□□□□ 0.51
CSNK1E-203ENST00000396832 TRAV8-2A0A0B4J237 113 aa18.26■□□□□ 0.51
CSNK1E-203ENST00000396832 LYRM7Q5U5X0 104 aa18.26■□□□□ 0.51
CSNK1E-203ENST00000396832 Q8N6K4 173 aa18.26■□□□□ 0.51
CSNK1E-203ENST00000396832 ANAPC13Q9BS18 74 aa18.26■□□□□ 0.51
CSNK1E-203ENST00000396832 IGHV3OR16-10A0A075B7F0 116 aa18.25■□□□□ 0.51
CSNK1E-203ENST00000396832 C2orf66Q6UXQ4 117 aa18.25■□□□□ 0.51
CSNK1E-203ENST00000396832 TMEM219Q86XT9 240 aa18.25■□□□□ 0.51
CSNK1E-203ENST00000396832 NDUFA11Q86Y39 141 aa18.25■□□□□ 0.51
CSNK1E-203ENST00000396832 M0R1W7 72 aa18.25■□□□□ 0.51
CSNK1E-203ENST00000396832 VCX2Q9H322 139 aa18.25■□□□□ 0.51
CSNK1E-203ENST00000396832 TGFAP01135 160 aa18.25■□□□□ 0.51
CSNK1E-203ENST00000396832 ZNF688P0C7X2 276 aa18.25■□□□□ 0.51
CSNK1E-203ENST00000396832 KIR2DL4Q99706 377 aa18.25■□□□□ 0.51
CSNK1E-203ENST00000396832 CRYBG3Q68DQ2 2970 aa18.24■□□□□ 0.51
CSNK1E-203ENST00000396832 A8MWV9 139 aa18.24■□□□□ 0.51
CSNK1E-203ENST00000396832 RPL39LQ96EH5 51 aaKnown RBP18.24■□□□□ 0.51
CSNK1E-203ENST00000396832 HIVEP3Q5T1R4 2406 aa18.23■□□□□ 0.51
CSNK1E-203ENST00000396832 SS18L2Q9UHA2 77 aa18.23■□□□□ 0.51
CSNK1E-203ENST00000396832 TRBV20-1A0A075B6N2 111 aa18.21■□□□□ 0.51
CSNK1E-203ENST00000396832 ZFAND6Q6FIF0 208 aa18.21■□□□□ 0.51
CSNK1E-203ENST00000396832 SBSPONQ8IVN8 264 aa18.21■□□□□ 0.51
CSNK1E-203ENST00000396832 ANKRD29Q8N6D5 301 aa18.21■□□□□ 0.51
CSNK1E-203ENST00000396832 C16orf92Q96LL3 132 aa18.21■□□□□ 0.51
CSNK1E-203ENST00000396832 PIEZO1Q92508 2521 aa18.2■□□□□ 0.5
CSNK1E-203ENST00000396832 MGPP08493 103 aa18.2■□□□□ 0.5
CSNK1E-203ENST00000396832 SAA4P35542 130 aa18.2■□□□□ 0.5
CSNK1E-203ENST00000396832 A0A0J9YY99 117 aa18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 SCGB1C2P0DMR2 95 aa18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 TEX29Q8N6K0 151 aa18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 C14orf178Q8N769 122 aaPredicted RBP18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 FAM110DQ8TAY7 271 aaPredicted RBP18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 METTL26Q96S19 204 aa18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 SPG11Q96JI7 2443 aa18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 CFC1BP0CG36 223 aa18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 CFC1P0CG37 223 aa18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 EMP1P54849 157 aa18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 C20orf173Q96LM9 149 aa18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 CUBNO60494 3623 aa18.19■□□□□ 0.5
CSNK1E-203ENST00000396832 F6UB75 175 aa18.17■□□□□ 0.5
CSNK1E-203ENST00000396832 GAGE5Q13069 117 aa18.17■□□□□ 0.5
CSNK1E-203ENST00000396832 GAGE6Q13070 117 aa18.17■□□□□ 0.5
CSNK1E-203ENST00000396832 A0A1W2PPR1 153 aa18.17■□□□□ 0.5
CSNK1E-203ENST00000396832 TMEM262E9PQX1 116 aa18.17■□□□□ 0.5
CSNK1E-203ENST00000396832 CRYGDP07320 174 aa18.17■□□□□ 0.5
CSNK1E-203ENST00000396832 RPL11P62913 178 aaKnown RBP18.17■□□□□ 0.5
CSNK1E-203ENST00000396832 C9orf47Q6ZRZ4 202 aa18.17■□□□□ 0.5
CSNK1E-203ENST00000396832 Q6ZS46 218 aa18.17■□□□□ 0.5
CSNK1E-203ENST00000396832 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.17■□□□□ 0.55e-7■■□□□ 14.3
CSNK1E-203ENST00000396832 C11orf86A6NJI1 115 aa18.16■□□□□ 0.5
CSNK1E-203ENST00000396832 S100A4P26447 101 aaKnown RBP18.16■□□□□ 0.5
CSNK1E-203ENST00000396832 RNF223E7ERA6 249 aa18.16■□□□□ 0.5
CSNK1E-203ENST00000396832 TRBV12-3P01733 135 aa18.15■□□□□ 0.5
CSNK1E-203ENST00000396832 C10orf126Q8N4M7 172 aa18.15■□□□□ 0.5
CSNK1E-203ENST00000396832 DUSP14O95147 198 aaKnown RBP18.15■□□□□ 0.5
CSNK1E-203ENST00000396832 DPH3P1Q9H4G8 78 aa18.15■□□□□ 0.5
CSNK1E-203ENST00000396832 IGHV3-30P01768 117 aa18.14■□□□□ 0.5
CSNK1E-203ENST00000396832 IGHV3-30-5P0DP03 117 aa18.14■□□□□ 0.5
CSNK1E-203ENST00000396832 B5MCH6 92 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 HERVK_113P61574 105 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 EBI3Q14213 229 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 UNQ9165/PRO28630Q6UXU0 137 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 IGLV4-69A0A075B6H9 119 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 ADORA2A-AS1P86434 159 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 EEF1AKMT3Q96AZ1 226 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 CITED1Q99966 193 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 PRO1854Q9UHT4 67 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 SORL1Q92673 2214 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 SIRPDQ9H106 197 aa18.13■□□□□ 0.49
CSNK1E-203ENST00000396832 CENPVL3A0A0U1RRI6 287 aa18.12■□□□□ 0.49
CSNK1E-203ENST00000396832 MINOS1Q5TGZ0 78 aa18.12■□□□□ 0.49
CSNK1E-203ENST00000396832 C11orf71Q6IPW1 123 aa18.12■□□□□ 0.49
CSNK1E-203ENST00000396832 MRPL53Q96EL3 112 aaKnown RBP18.12■□□□□ 0.49
CSNK1E-203ENST00000396832 AJUBAQ96IF1 538 aa18.12■□□□□ 0.49
CSNK1E-203ENST00000396832 MINOS1-NBL1R4GNA1 71 aa18.12■□□□□ 0.49
CSNK1E-203ENST00000396832 CELSR2Q9HCU4 2923 aa18.12■□□□□ 0.49
CSNK1E-203ENST00000396832 SLC25A20O43772 301 aa18.11■□□□□ 0.49
CSNK1E-203ENST00000396832 IGHV3-11P01762 117 aa18.11■□□□□ 0.49
CSNK1E-203ENST00000396832 SRD5A1P18405 259 aa18.11■□□□□ 0.49
CSNK1E-203ENST00000396832 TSHBP01222 138 aa18.11■□□□□ 0.49
CSNK1E-203ENST00000396832 NHLRC4P0CG21 123 aaPredicted RBP18.11■□□□□ 0.49
CSNK1E-203ENST00000396832 SLC25A29Q8N8R3 303 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms