RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 IGKV2-40A0A087WW87 121 aaPredicted RBP6.64□□□□□ -1.35
NDE1-202ENST00000396355 TRAV12-1A0A0B4J245 112 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 MRPS12O15235 138 aaKnown RBP6.64□□□□□ -1.35
NDE1-202ENST00000396355 SH2D1AO60880 128 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 IGKV2D-40P01614 121 aaPredicted RBP6.64□□□□□ -1.35
NDE1-202ENST00000396355 NHLRC4P0CG21 123 aaPredicted RBP6.64□□□□□ -1.35
NDE1-202ENST00000396355 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 CFC1P0CG37 223 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 MBD3L2Q8NHZ7 208 aaPredicted RBP6.64□□□□□ -1.35
NDE1-202ENST00000396355 MSRB1Q9NZV6 116 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 IGKV3-15P01624 115 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 IGLV2-8P01709 118 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 DUTP33316 252 aaKnown RBP6.64□□□□□ -1.35
NDE1-202ENST00000396355 U3KQE9 123 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 IGHV3-66A0A0C4DH42 116 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 SPRY2O43597 315 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 CRIP2P52943 208 aaPredicted RBP6.64□□□□□ -1.35
NDE1-202ENST00000396355 CD69Q07108 199 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 MORN3Q6PF18 240 aaPredicted RBP6.64□□□□□ -1.35
NDE1-202ENST00000396355 CCL17Q92583 94 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 MBD6Q96DN6 1003 aa6.64□□□□□ -1.35
NDE1-202ENST00000396355 HLA-DMBP28068 263 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 KIR2DL5BQ8NHK3 375 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 CLEC2BQ92478 149 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 PEMTQ9UBM1 199 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 ANKRD17O75179 2603 aaKnown RBP6.63□□□□□ -1.35
NDE1-202ENST00000396355 LGALS1P09382 135 aaKnown RBP6.63□□□□□ -1.35
NDE1-202ENST00000396355 SAA1P0DJI8 122 aaPredicted RBP6.63□□□□□ -1.35
NDE1-202ENST00000396355 FHL3Q13643 280 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 RHOHQ15669 191 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 VMA21Q3ZAQ7 101 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 Q6P435 159 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 TMEM219Q86XT9 240 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 C8orf49Q96NF6 230 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 PRRC2AP48634 2157 aaKnown RBP6.63□□□□□ -1.35
NDE1-202ENST00000396355 FAM90A9PA6NNJ1 464 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 C15orf61A6NNL5 157 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 LRRC75A-AS1Q8N1F1 130 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 HIVEP2P31629 2446 aa6.63□□□□□ -1.35
NDE1-202ENST00000396355 PFN2P35080 140 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 FAM201AQ5SY85 155 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 Q71RC1 249 aaPredicted RBP6.62□□□□□ -1.35
NDE1-202ENST00000396355 SLC25A39Q9BZJ4 359 aaPredicted RBP6.62□□□□□ -1.35
NDE1-202ENST00000396355 TRBV6-6A0A0A6YYG2 114 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 ZNF22P17026 224 aaPredicted RBP6.62□□□□□ -1.35
NDE1-202ENST00000396355 CCL8P80075 99 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 Q6ZS92 163 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 IGF2BP2-AS1Q96M15 143 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 JPT2Q9H910 190 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 ZNF492Q9P255 531 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 PHLDA3Q9Y5J5 127 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 RELNP78509 3460 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.62□□□□□ -1.35
NDE1-202ENST00000396355 WISP2O76076 250 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 RPL27AP46776 148 aaKnown RBP6.62□□□□□ -1.35
NDE1-202ENST00000396355 Q86TA4 180 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 C8orf31Q8N9H6 132 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 Q8NA96 180 aa6.62□□□□□ -1.35
NDE1-202ENST00000396355 IGHV3-23P01764 117 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 DGAT2L7PQ6IED9 249 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 ZNF497Q6ZNH5 498 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 SDIM1Q6ZPB5 146 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 C20orf197Q8N268 126 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 SPRR3Q9UBC9 169 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 F8VRH5 84 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 SRD5A1P18405 259 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 SMCPP49901 116 aaPredicted RBP6.61□□□□□ -1.35
NDE1-202ENST00000396355 CEMP1Q6PRD7 247 aaPredicted RBP6.61□□□□□ -1.35
NDE1-202ENST00000396355 PLEKHB2Q96CS7 222 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 MRPL20Q9BYC9 149 aaKnown RBP6.61□□□□□ -1.35
NDE1-202ENST00000396355 FOXA2Q9Y261 457 aaPredicted RBP6.61□□□□□ -1.35
NDE1-202ENST00000396355 A0A1W2PRX2 142 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 CRYGBP07316 175 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 LINC00596Q86U02 117 aa6.61□□□□□ -1.35
NDE1-202ENST00000396355 KLF14Q8TD94 323 aaPredicted RBP6.61□□□□□ -1.35
NDE1-202ENST00000396355 CSMD1Q96PZ7 3565 aa6.6□□□□□ -1.35
NDE1-202ENST00000396355 GRNP28799 593 aaKnown RBP6.6□□□□□ -1.35
NDE1-202ENST00000396355 NDUFA11Q86Y39 141 aa6.6□□□□□ -1.35
NDE1-202ENST00000396355 MDS2Q8NDY4 140 aa6.6□□□□□ -1.35
NDE1-202ENST00000396355 ITLN1Q8WWA0 313 aa6.6□□□□□ -1.35
NDE1-202ENST00000396355 ZNRD1Q9P1U0 126 aa6.6□□□□□ -1.35
NDE1-202ENST00000396355 METRNQ9UJH8 293 aa6.6□□□□□ -1.35
NDE1-202ENST00000396355 A0A1B0GXF2 115 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 BRWD1-AS2P59051 145 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 PRR20EP86478 221 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 PRR20CP86479 221 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 PRR20DP86480 221 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 PRR20BP86481 221 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 PRR20AP86496 221 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 TNFAIP6P98066 277 aaPredicted RBP6.59□□□□□ -1.35
NDE1-202ENST00000396355 IGFBPL1Q8WX77 278 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 CXXC4Q9H2H0 198 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.59□□□□□ -1.35
NDE1-202ENST00000396355 ATOX1O00244 68 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 MYCNOSP40205 109 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 UTP20O75691 2785 aaKnown RBP6.59□□□□□ -1.35
NDE1-202ENST00000396355 GFRA4Q9GZZ7 299 aa6.59□□□□□ -1.35
NDE1-202ENST00000396355 RBMY1BA6NDE4 496 aaKnown RBP6.58□□□□□ -1.36
NDE1-202ENST00000396355 RBMY1EA6NEQ0 496 aaKnown RBP6.58□□□□□ -1.36
NDE1-202ENST00000396355 RBMY1DP0C7P1 496 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms