RNA–Protein interactions for RNA: ENST00000395856.3

NCOA1-203, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-203ENST00000395856 TRPM7Q96QT4 1865 aa3.17□□□□□ -1.9
NCOA1-203ENST00000395856 SPTBP11277 2137 aa3.17□□□□□ -1.9
NCOA1-203ENST00000395856 A0A096LNI7 61 aa3.17□□□□□ -1.9
NCOA1-203ENST00000395856 WI2-2373I1.2A0A1W2PRP0 233 aa3.17□□□□□ -1.9
NCOA1-203ENST00000395856 PRYO14603 147 aa3.17□□□□□ -1.9
NCOA1-203ENST00000395856 NUPR1O60356 82 aa3.17□□□□□ -1.9
NCOA1-203ENST00000395856 NDUFV3P56181 108 aaKnown RBP3.17□□□□□ -1.9
NCOA1-203ENST00000395856 RPL39P62891 51 aaKnown RBP3.17□□□□□ -1.9
NCOA1-203ENST00000395856 SDIM1Q6ZPB5 146 aa3.17□□□□□ -1.9
NCOA1-203ENST00000395856 FXYD5Q96DB9 178 aa3.17□□□□□ -1.9
NCOA1-203ENST00000395856 MRPL53Q96EL3 112 aaKnown RBP3.17□□□□□ -1.9
NCOA1-203ENST00000395856 USP17L23D6RBM5 183 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 IFI6P09912 130 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 GYPEP15421 78 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 SLURP1P55000 103 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 UPK3BQ9BT76 320 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 SND1-IT1Q9HBX3 110 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 NDUFA4L2Q9NRX3 87 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 TP53BP1Q12888 1972 aaPredicted RBP3.16□□□□□ -1.9
NCOA1-203ENST00000395856 K7ENP7 123 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 ATOX1O00244 68 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 ELANEP08246 267 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 UBE2D1P51668 147 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 WFDC10BQ8IUB3 73 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 C10orf105Q8TEF2 133 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 CSMD1Q96PZ7 3565 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 MYLKQ15746 1914 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 DOCK9Q9BZ29 2069 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 CSMD2Q7Z408 3487 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 A4D1N5 150 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 LGALS9O00182 355 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 LECT2O14960 151 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 NDUFB1O75438 58 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 CFPP27918 469 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 CCL18P55774 89 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 HRCT1Q6UXD1 115 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 SPANXA1Q9NS26 97 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 SNURFQ9Y675 71 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 K7EQD1 137 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 FXYD2P54710 66 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 HERV-K104P63124 156 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 C17orf58Q2M2W7 97 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 ZNF833PQ6ZTB9 187 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 TMEM14BQ9NUH8 114 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 MPDZO75970 2070 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 PLXNA1Q9UIW2 1896 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 LTAP01374 205 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 C1orf229Q6ZS94 237 aaPredicted RBP3.16□□□□□ -1.9
NCOA1-203ENST00000395856 RNF152Q8N8N0 203 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 TM2D2Q9BX73 214 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 SERP1Q9Y6X1 66 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 SIPA1L3O60292 1781 aaPredicted RBP3.16□□□□□ -1.9
NCOA1-203ENST00000395856 IGHV1-69DA0A0B4J2H0 117 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 IGHV1-69P01742 117 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 MSMBP08118 114 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 FOXI1Q12951 378 aa3.16□□□□□ -1.9
NCOA1-203ENST00000395856 CSDC2Q9Y534 153 aaKnown RBP3.16□□□□□ -1.9
NCOA1-203ENST00000395856 RALGAPA1Q6GYQ0 2036 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 TSC2P49815 1807 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 ADAMTS7Q9UKP4 1686 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 CHD7Q9P2D1 2997 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 IGHV7-4-1A0A0J9YVY3 117 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 SLPIP03973 132 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 GATA3P23771 443 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 PDE6HQ13956 83 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 NFE4Q86UQ8 179 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 SERP2Q8N6R1 65 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 RITA1Q96K30 269 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 CHD9Q3L8U1 2897 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 TRBV12-3P01733 135 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 C11orf52Q96A22 123 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 VWCEQ96DN2 955 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 COL4A6Q14031 1691 aa3.15□□□□□ -1.9
NCOA1-203ENST00000395856 SIVA1O15304 175 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 IGHV2-5P01817 119 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 DEFB1P60022 68 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 FOXI2Q6ZQN5 318 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 DEFB125Q8N687 156 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 OPRPNQ99935 248 aaPredicted RBP3.15□□□□□ -1.91
NCOA1-203ENST00000395856 YLPM1P49750 1951 aaKnown RBP3.15□□□□□ -1.91
NCOA1-203ENST00000395856 NHSL1Q5SYE7 1610 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 INAFM1C9JVW0 142 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 ATP5G1P05496 136 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 HIGD2BQ4VC39 106 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 SIRPDQ9H106 197 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 A0A0C4DFX4 3053 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 CACNA1EQ15878 2313 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 ZNF503-AS2A6NEH8 195 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 COX7A2LO14548 114 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 ZFP36L1Q07352 338 aaKnown RBP3.15□□□□□ -1.91
NCOA1-203ENST00000395856 RHOHQ15669 191 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 C9orf66Q5T8R8 295 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 Q6ZR03 302 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 FANCD2OSQ96PS1 177 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 MSRB1Q9NZV6 116 aa3.15□□□□□ -1.91
NCOA1-203ENST00000395856 POLR2AP24928 1970 aaKnown RBP3.15□□□□□ -1.91
NCOA1-203ENST00000395856 IGHV2-70DA0A0C4DH43 119 aa3.14□□□□□ -1.91
NCOA1-203ENST00000395856 A0A0J9YXV3 536 aa3.14□□□□□ -1.91
NCOA1-203ENST00000395856 NDUFA4O00483 81 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms