RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 ZNF491Q8N8L2 437 aa4.29□□□□□ -1.72
NPM1-203ENST00000393820 IFI27L1Q96BM0 104 aa4.29□□□□□ -1.72
NPM1-203ENST00000393820 ZNF48Q96MX3 618 aaPredicted RBP4.29□□□□□ -1.72
NPM1-203ENST00000393820 RAB1BQ9H0U4 201 aa4.29□□□□□ -1.72
NPM1-203ENST00000393820 HLA-DRB4X5D2U9 266 aa4.29□□□□□ -1.72
NPM1-203ENST00000393820 RAI1Q7Z5J4 1906 aaPredicted RBP4.29□□□□□ -1.72
NPM1-203ENST00000393820 IGHV1-3A0A0C4DH29 117 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 A0A1W2PPM0 123 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 D6R8Y8 96 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 H0Y8G0 127 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 BUB1B-PAK6H3BSN5 160 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 H3BTX0 84 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 H3BUT2 72 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 CIDEAO60543 219 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 SCGB2A1O75556 95 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 SMIM13P0DJ93 91 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 FABP2P12104 132 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 MRPL51Q4U2R6 128 aaKnown RBP4.28□□□□□ -1.72
NPM1-203ENST00000393820 LYZL1Q6UWQ5 148 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 OR8A1Q8NGG7 326 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 MCRIP2Q9BUT9 160 aaKnown RBP4.28□□□□□ -1.72
NPM1-203ENST00000393820 TP73-AS1Q9UF72 201 aa4.28□□□□□ -1.72
NPM1-203ENST00000393820 CHTOPQ9Y3Y2 248 aaKnown RBP4.28□□□□□ -1.72
NPM1-203ENST00000393820 ANK3Q12955 4377 aaKnown RBP4.28□□□□□ -1.72
NPM1-203ENST00000393820 PLCE1Q9P212 2302 aa4.28□□□□□ -1.73
NPM1-203ENST00000393820 IGLV5-37A0A075B6J1 123 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 TMEM238C9JI98 176 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 K7EIM0 57 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 SCGB1A1P11684 91 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 EVI2AP22794 236 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 FCER1GP30273 86 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 CKS2P33552 79 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 CACNG7P62955 275 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 RPL24P83731 157 aaKnown RBP4.27□□□□□ -1.73
NPM1-203ENST00000393820 TAL2Q16559 108 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 ZNF672Q499Z4 452 aaPredicted RBP4.27□□□□□ -1.73
NPM1-203ENST00000393820 LYPD2Q6UXB3 125 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 ERASQ7Z444 233 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 LHFPL4Q7Z7J7 247 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 PHLDA1Q8WV24 401 aaPredicted RBP4.27□□□□□ -1.73
NPM1-203ENST00000393820 CCL17Q92583 94 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 C17orf77Q96MU5 243 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 CNFNQ9BYD5 112 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 NXT2Q9NPJ8 142 aaKnown RBP4.27□□□□□ -1.73
NPM1-203ENST00000393820 THYN1Q9P016 225 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 DSCAML1Q8TD84 2053 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 IGHV3-72A0A0B4J1Y9 119 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 LOC389332A0A1B0GUA5 103 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 LY6LH3BQJ8 138 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 SNAI2O43623 268 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 SH2D1AO60880 128 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 ATP5LO75964 103 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 IGLC6P0CF74 106 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 SLC25A16P16260 332 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 RPL7P18124 248 aaKnown RBP4.27□□□□□ -1.73
NPM1-203ENST00000393820 FAM106AQ4KMX7 169 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 AMN1Q8IY45 258 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 MAP1LC3AQ9H492 121 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 CTSZQ9UBR2 303 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 HHLA3Q9XRX5 114 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 TIMM8BQ9Y5J9 83 aaPredicted RBP4.27□□□□□ -1.73
NPM1-203ENST00000393820 SPCS1Q9Y6A9 102 aa4.27□□□□□ -1.73
NPM1-203ENST00000393820 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.26□□□□□ -1.734e-8■■■■■ 27.4
NPM1-203ENST00000393820 TANC2Q9HCD6 1990 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 SVEP1Q4LDE5 3571 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 TNCP24821 2201 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 IGHV3-21A0A0B4J1V1 117 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 TMEM213A2RRL7 107 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 FABP5P3A8MUU1 101 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 F8W1H4 67 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 J3QR89 54 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 ZNF207O43670 478 aaKnown RBP4.26□□□□□ -1.73
NPM1-203ENST00000393820 SAP30O75446 220 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 CNIH1O95406 144 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 IL4P05112 153 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 CNTFRP26992 372 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 FCGR2BP31994 310 aaPredicted RBP4.26□□□□□ -1.73
NPM1-203ENST00000393820 LOXL1Q08397 574 aaPredicted RBP4.26□□□□□ -1.73
NPM1-203ENST00000393820 TWIST1Q15672 202 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 CLEC2AQ6UVW9 174 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 MAPKAPK5-AS1Q8N8E1 139 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 NRACQ8N912 160 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 NPBQ8NG41 125 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 RPEQ96AT9 228 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 VGLL1Q99990 258 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 FBXL15Q9H469 300 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 HIF1ANQ9NWT6 349 aa4.26□□□□□ -1.73
NPM1-203ENST00000393820 CADP27708 2225 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 CUBNO60494 3623 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 TMEM89A2RUT3 159 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 RBAKDNA6NC62 111 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 NDUFS8O00217 210 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 GNG7O60262 68 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 NDUFA3O95167 84 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 NPYP01303 97 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 IGHV4-39P01824 125 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 IGKCP01834 107 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 IGHV4-31P0DP07 118 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 NMUP48645 174 aa4.25□□□□□ -1.73
NPM1-203ENST00000393820 RAB9AP51151 201 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms