RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 IGKV3D-20A0A0C4DH25 116 aa12.25□□□□□ -0.45
PDLIM7-205ENST00000393551 IGHV3-38A0A0C4DH36 116 aa12.25□□□□□ -0.45
PDLIM7-205ENST00000393551 G3V3Q6 166 aa12.25□□□□□ -0.45
PDLIM7-205ENST00000393551 SMUG1Q53HV7 270 aa12.25□□□□□ -0.45
PDLIM7-205ENST00000393551 SH2D6Q7Z4S9 175 aa12.25□□□□□ -0.45
PDLIM7-205ENST00000393551 PTH2Q96A98 100 aa12.25□□□□□ -0.45
PDLIM7-205ENST00000393551 TRAV34A0A0B4J273 112 aa12.24□□□□□ -0.45
PDLIM7-205ENST00000393551 TRBV6-4A0A1B0GX49 114 aa12.24□□□□□ -0.45
PDLIM7-205ENST00000393551 K7EQM0 130 aa12.24□□□□□ -0.45
PDLIM7-205ENST00000393551 LINC01556Q5JQF7 62 aa12.24□□□□□ -0.45
PDLIM7-205ENST00000393551 Q6ZSN1 163 aa12.24□□□□□ -0.45
PDLIM7-205ENST00000393551 A0A1W2PRE2 83 aa12.23□□□□□ -0.45
PDLIM7-205ENST00000393551 LRCOL1A6NCL2 159 aa12.23□□□□□ -0.45
PDLIM7-205ENST00000393551 PPT1P50897 306 aa12.23□□□□□ -0.45
PDLIM7-205ENST00000393551 C10orf126Q8N4M7 172 aa12.23□□□□□ -0.45
PDLIM7-205ENST00000393551 A0A0D9SG52 128 aa12.22□□□□□ -0.45
PDLIM7-205ENST00000393551 IBA57-AS1B1ANH7 110 aa12.22□□□□□ -0.45
PDLIM7-205ENST00000393551 CIDEAO60543 219 aa12.22□□□□□ -0.45
PDLIM7-205ENST00000393551 ZNF345Q14585 488 aa12.22□□□□□ -0.45
PDLIM7-205ENST00000393551 RHOHQ15669 191 aa12.22□□□□□ -0.45
PDLIM7-205ENST00000393551 INO80EQ8NBZ0 244 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-205ENST00000393551 OR11H4Q8NGC9 324 aa12.22□□□□□ -0.45
PDLIM7-205ENST00000393551 Q9UF83 564 aa12.22□□□□□ -0.45
PDLIM7-205ENST00000393551 ARL2-SNX15V9GYD0 113 aa12.22□□□□□ -0.45
PDLIM7-205ENST00000393551 SRRM2Q9UQ35 2752 aaKnown RBP12.22□□□□□ -0.45
PDLIM7-205ENST00000393551 FXYD6-FXYD2A0A087WZ82 144 aa12.21□□□□□ -0.45
PDLIM7-205ENST00000393551 SMLR1H3BR10 107 aa12.21□□□□□ -0.45
PDLIM7-205ENST00000393551 SAPCD1Q5SSQ6 148 aa12.21□□□□□ -0.45
PDLIM7-205ENST00000393551 PRADC1Q9BSG0 188 aa12.21□□□□□ -0.45
PDLIM7-205ENST00000393551 MYCBP2O75592 4640 aa12.21□□□□□ -0.46
PDLIM7-205ENST00000393551 CTXND1A0A1B0GTU2 59 aa12.2□□□□□ -0.46
PDLIM7-205ENST00000393551 EPM2AB3EWF7 344 aa12.2□□□□□ -0.46
PDLIM7-205ENST00000393551 CRIP1P50238 77 aa12.2□□□□□ -0.46
PDLIM7-205ENST00000393551 FGF8P55075 233 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-205ENST00000393551 UBE2G2P60604 165 aa12.2□□□□□ -0.46
PDLIM7-205ENST00000393551 OR10J3Q5JRS4 329 aa12.2□□□□□ -0.46
PDLIM7-205ENST00000393551 Q8N3U1 123 aa12.2□□□□□ -0.46
PDLIM7-205ENST00000393551 PARLQ9H300 379 aa12.2□□□□□ -0.46
PDLIM7-205ENST00000393551 FAM74A7A6NL05 159 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 IGHV3-30P01768 117 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 IGHV3-33P01772 117 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 LINC00694P0DN24 101 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 IGHV3-30-3P0DP02 117 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 IGHV3-30-5P0DP03 117 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 MGST1P10620 155 aaKnown RBP12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 LELP1Q5T871 98 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 UFSP1Q6NVU6 142 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 C9orf62Q8N4C0 152 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 GTSF1LQ9H1H1 148 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 JPT2Q9H910 190 aa12.19□□□□□ -0.46
PDLIM7-205ENST00000393551 TRAV8-6A0A0B4J262 113 aa12.18□□□□□ -0.46
PDLIM7-205ENST00000393551 PEX7O00628 323 aa12.18□□□□□ -0.46
PDLIM7-205ENST00000393551 GCSHP23434 173 aa12.18□□□□□ -0.46
PDLIM7-205ENST00000393551 Q86TA4 180 aa12.18□□□□□ -0.46
PDLIM7-205ENST00000393551 KCNRGQ8N5I3 272 aa12.18□□□□□ -0.46
PDLIM7-205ENST00000393551 ATP6V0E2Q8NHE4 81 aa12.18□□□□□ -0.46
PDLIM7-205ENST00000393551 SAMD10Q9BYL1 202 aa12.18□□□□□ -0.46
PDLIM7-205ENST00000393551 CYTL1Q9NRR1 136 aa12.18□□□□□ -0.46
PDLIM7-205ENST00000393551 BORCS7-ASMTA0A0B4J1R7 106 aa12.17□□□□□ -0.46
PDLIM7-205ENST00000393551 FABP5P3A8MUU1 101 aa12.17□□□□□ -0.46
PDLIM7-205ENST00000393551 ARPC5O15511 151 aa12.17□□□□□ -0.46
PDLIM7-205ENST00000393551 IFNA7P01567 189 aa12.17□□□□□ -0.46
PDLIM7-205ENST00000393551 LGALSLQ3ZCW2 172 aaPredicted RBP12.17□□□□□ -0.46
PDLIM7-205ENST00000393551 ZFP2Q6ZN57 461 aa12.17□□□□□ -0.46
PDLIM7-205ENST00000393551 Q9HAA7 133 aa12.17□□□□□ -0.46
PDLIM7-205ENST00000393551 NKX2-5P52952 324 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-205ENST00000393551 PIK3CD-AS1Q5SR53 167 aa12.16□□□□□ -0.46
PDLIM7-205ENST00000393551 ZC2HC1AQ96GY0 325 aa12.16□□□□□ -0.46
PDLIM7-205ENST00000393551 IL36BQ9NZH7 164 aa12.16□□□□□ -0.46
PDLIM7-205ENST00000393551 A8MWV9 139 aa12.15□□□□□ -0.46
PDLIM7-205ENST00000393551 KRBOX1C9JBD0 128 aa12.15□□□□□ -0.46
PDLIM7-205ENST00000393551 PSCAO43653 123 aa12.15□□□□□ -0.46
PDLIM7-205ENST00000393551 HAMPP81172 84 aa12.15□□□□□ -0.46
PDLIM7-205ENST00000393551 Q5VSD8 79 aa12.15□□□□□ -0.46
PDLIM7-205ENST00000393551 DMRTA1Q5VZB9 504 aa12.15□□□□□ -0.46
PDLIM7-205ENST00000393551 TMUB2Q71RG4 321 aa12.15□□□□□ -0.46
PDLIM7-205ENST00000393551 COX8CQ7Z4L0 72 aa12.15□□□□□ -0.46
PDLIM7-205ENST00000393551 C14orf178Q8N769 122 aaPredicted RBP12.15□□□□□ -0.46
PDLIM7-205ENST00000393551 GAGE12JA6NER3 117 aa12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 H3BVH4 76 aa12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 SMR3BP02814 79 aaPredicted RBP12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 S100A4P26447 101 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 ASIPP42127 132 aa12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 EIF5AP63241 154 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 GAGE1Q13065 139 aa12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 GAGE4Q13068 117 aa12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 GAGE5Q13069 117 aa12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 GAGE13Q4V321 117 aa12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 DNLZQ5SXM8 178 aa12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 Q8N814 137 aa12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 HIST1H2BAQ96A08 127 aa12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 FLG2Q5D862 2391 aaPredicted RBP12.14□□□□□ -0.47
PDLIM7-205ENST00000393551 DMBT1Q9UGM3 2413 aaPredicted RBP12.13□□□□□ -0.47
PDLIM7-205ENST00000393551 IGLV5-52A0A0A0MRZ9 124 aa12.13□□□□□ -0.47
PDLIM7-205ENST00000393551 KANTRA0A1W2PQU2 76 aa12.13□□□□□ -0.47
PDLIM7-205ENST00000393551 B4DEV8 164 aa12.13□□□□□ -0.47
PDLIM7-205ENST00000393551 SH2D1AO60880 128 aa12.13□□□□□ -0.47
PDLIM7-205ENST00000393551 FHITP49789 147 aa12.13□□□□□ -0.47
PDLIM7-205ENST00000393551 WFDC2Q14508 124 aa12.13□□□□□ -0.47
PDLIM7-205ENST00000393551 AKR1C8PQ5T2L2 129 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms