RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 DKK2Q9UBU2 259 aa14.63□□□□□ -0.07
CCDC50-202ENST00000392456 C5orf56Q8N8D9 126 aa14.63□□□□□ -0.07
CCDC50-202ENST00000392456 IGKV1D-37A0A075B6S9 117 aa14.62□□□□□ -0.07
CCDC50-202ENST00000392456 DEFB112Q30KQ8 113 aa14.62□□□□□ -0.07
CCDC50-202ENST00000392456 C21orf62Q9NYP8 219 aa14.62□□□□□ -0.07
CCDC50-202ENST00000392456 FLNBO75369 2602 aaKnown RBP14.62□□□□□ -0.07
CCDC50-202ENST00000392456 CT83Q5H943 113 aa14.61□□□□□ -0.07
CCDC50-202ENST00000392456 MTORP42345 2549 aa14.61□□□□□ -0.07
CCDC50-202ENST00000392456 C9JAW5 83 aa14.61□□□□□ -0.07
CCDC50-202ENST00000392456 F5H768 121 aa14.61□□□□□ -0.07
CCDC50-202ENST00000392456 J3KT08 172 aa14.61□□□□□ -0.07
CCDC50-202ENST00000392456 J3QLI3 93 aa14.61□□□□□ -0.07
CCDC50-202ENST00000392456 HIGD1AQ9Y241 93 aa14.61□□□□□ -0.07
CCDC50-202ENST00000392456 S4R3C0 116 aa14.61□□□□□ -0.07
CCDC50-202ENST00000392456 IFI27L1Q96BM0 104 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 FANCD2OSQ96PS1 177 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 PRSS22Q9GZN4 317 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 I3L2K1 104 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 ATP6V0E1O15342 81 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 HLA-DRB4P13762 266 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 PSMB2P49721 201 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 ANKRD29Q8N6D5 301 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 TMEM101Q96IK0 257 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 HHLA3Q9XRX5 114 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 HLA-DRB4X5D2U9 266 aa14.6□□□□□ -0.07
CCDC50-202ENST00000392456 G3V318 75 aa14.59□□□□□ -0.07
CCDC50-202ENST00000392456 HAX1O00165 279 aa14.59□□□□□ -0.07
CCDC50-202ENST00000392456 DUX5Q96PT3 197 aa14.59□□□□□ -0.07
CCDC50-202ENST00000392456 LINC00527Q9UJ94 153 aa14.59□□□□□ -0.07
CCDC50-202ENST00000392456 OTOGQ6ZRI0 2925 aa14.59□□□□□ -0.07
CCDC50-202ENST00000392456 K7EIM0 57 aa14.59□□□□□ -0.07
CCDC50-202ENST00000392456 FSHBP01225 129 aa14.59□□□□□ -0.07
CCDC50-202ENST00000392456 IFI27P40305 119 aaPredicted RBP14.59□□□□□ -0.07
CCDC50-202ENST00000392456 Q6ZS46 218 aa14.59□□□□□ -0.07
CCDC50-202ENST00000392456 GFRA4Q9GZZ7 299 aa14.59□□□□□ -0.07
CCDC50-202ENST00000392456 A6NDX4 124 aa14.58□□□□□ -0.07
CCDC50-202ENST00000392456 A8MWV9 139 aa14.58□□□□□ -0.07
CCDC50-202ENST00000392456 OR13C6PQ8NH95 151 aa14.58□□□□□ -0.07
CCDC50-202ENST00000392456 AGRNO00468 2067 aa14.58□□□□□ -0.08
CCDC50-202ENST00000392456 A0A1B0GX51 115 aa14.58□□□□□ -0.08
CCDC50-202ENST00000392456 F8WDY8 70 aa14.58□□□□□ -0.08
CCDC50-202ENST00000392456 PEX7O00628 323 aa14.58□□□□□ -0.08
CCDC50-202ENST00000392456 IGHV4-59P01825 116 aa14.58□□□□□ -0.08
CCDC50-202ENST00000392456 ECSCRQ19T08 205 aa14.58□□□□□ -0.08
CCDC50-202ENST00000392456 IL17RELQ6ZVW7 336 aa14.58□□□□□ -0.08
CCDC50-202ENST00000392456 OR1L4Q8NGR5 311 aa14.58□□□□□ -0.08
CCDC50-202ENST00000392456 MOB4Q9Y3A3 225 aa14.58□□□□□ -0.08
CCDC50-202ENST00000392456 WI2-2373I1.2A0A1W2PRP0 233 aa14.57□□□□□ -0.08
CCDC50-202ENST00000392456 IL4P05112 153 aa14.57□□□□□ -0.08
CCDC50-202ENST00000392456 BLCAPP62952 87 aa14.57□□□□□ -0.08
CCDC50-202ENST00000392456 MRPL23Q16540 153 aaKnown RBP14.57□□□□□ -0.08
CCDC50-202ENST00000392456 ZMAT4Q9H898 229 aa14.57□□□□□ -0.08
CCDC50-202ENST00000392456 NF1P21359 2839 aa14.57□□□□□ -0.08
CCDC50-202ENST00000392456 TRBV7-3A0A075B6L6 115 aa14.57□□□□□ -0.08
CCDC50-202ENST00000392456 LINC00322Q6ZN03 302 aaPredicted RBP14.57□□□□□ -0.08
CCDC50-202ENST00000392456 IGLV11-55A0A075B6I3 123 aa14.56□□□□□ -0.08
CCDC50-202ENST00000392456 HBDP02042 147 aa14.56□□□□□ -0.08
CCDC50-202ENST00000392456 C8orf88P0DMB2 117 aa14.56□□□□□ -0.08
CCDC50-202ENST00000392456 THAP8Q8NA92 274 aa14.56□□□□□ -0.08
CCDC50-202ENST00000392456 BAALCQ8WXS3 180 aa14.56□□□□□ -0.08
CCDC50-202ENST00000392456 FOXC2Q99958 501 aa14.56□□□□□ -0.08
CCDC50-202ENST00000392456 TMSB15BA0A087X1C1 80 aa14.55□□□□□ -0.08
CCDC50-202ENST00000392456 HOXA3O43365 443 aaPredicted RBP14.55□□□□□ -0.08
CCDC50-202ENST00000392456 HIST1H4GQ99525 98 aa14.55□□□□□ -0.08
CCDC50-202ENST00000392456 ANK3Q12955 4377 aaKnown RBP14.55□□□□□ -0.08
CCDC50-202ENST00000392456 ZFP2Q6ZN57 461 aa14.55□□□□□ -0.08
CCDC50-202ENST00000392456 TRAV8-2A0A0B4J237 113 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 C19orf71A6NCJ1 209 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 IGHV3-23P01764 117 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 UBE2D3P61077 147 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 UBE2D2P62837 147 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 MORN5Q5VZ52 161 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 ZNF329Q86UD4 541 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 MAPKAPK5-AS1Q8N8E1 139 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 FAM167A-AS1Q96KT0 104 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 SGK494Q96LW2 274 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 PRADC1Q9BSG0 188 aa14.54□□□□□ -0.08
CCDC50-202ENST00000392456 UBE2L3P68036 154 aaKnown RBP14.53□□□□□ -0.08
CCDC50-202ENST00000392456 KRTAP1-1Q07627 177 aa14.53□□□□□ -0.08
CCDC50-202ENST00000392456 GATD1Q8NB37 220 aa14.53□□□□□ -0.08
CCDC50-202ENST00000392456 CHCHD5Q9BSY4 110 aa14.53□□□□□ -0.08
CCDC50-202ENST00000392456 P01737 135 aa14.53□□□□□ -0.08
CCDC50-202ENST00000392456 PATE2Q6UY27 113 aa14.53□□□□□ -0.08
CCDC50-202ENST00000392456 KIR2DL5BQ8NHK3 375 aa14.53□□□□□ -0.08
CCDC50-202ENST00000392456 ODF3Q96PU9 254 aa14.53□□□□□ -0.08
CCDC50-202ENST00000392456 SLC25A2Q9BXI2 301 aa14.53□□□□□ -0.08
CCDC50-202ENST00000392456 DUSP14O95147 198 aaKnown RBP14.52□□□□□ -0.08
CCDC50-202ENST00000392456 FXYD7P58549 80 aa14.52□□□□□ -0.08
CCDC50-202ENST00000392456 MLST8Q9BVC4 326 aa14.52□□□□□ -0.08
CCDC50-202ENST00000392456 ZNF492Q9P255 531 aa14.52□□□□□ -0.08
CCDC50-202ENST00000392456 F8W735 103 aaPredicted RBP14.52□□□□□ -0.09
CCDC50-202ENST00000392456 NDUFA7O95182 113 aa14.52□□□□□ -0.09
CCDC50-202ENST00000392456 IGKV1-17P01599 117 aa14.52□□□□□ -0.09
CCDC50-202ENST00000392456 FCER1GP30273 86 aa14.52□□□□□ -0.09
CCDC50-202ENST00000392456 GTSCR1Q86UQ5 136 aa14.52□□□□□ -0.09
CCDC50-202ENST00000392456 C15orf53Q8NAA6 179 aa14.51□□□□□ -0.09
CCDC50-202ENST00000392456 MYMXA0A1B0GTQ4 84 aa14.51□□□□□ -0.09
CCDC50-202ENST00000392456 LINC01619G3V211 115 aa14.51□□□□□ -0.09
CCDC50-202ENST00000392456 RPS28P62857 69 aaKnown RBP14.51□□□□□ -0.09
CCDC50-202ENST00000392456 MRAPQ8TCY5 172 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms