RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 NACAE9PAV3 2078 aa11.36□□□□□ -0.59
SNRPB-201ENST00000381342 C9JCJ5 164 aa11.36□□□□□ -0.59
SNRPB-201ENST00000381342 SRP19P09132 144 aaKnown RBP11.36□□□□□ -0.59
SNRPB-201ENST00000381342 ZNF575Q86XF7 245 aa11.36□□□□□ -0.59
SNRPB-201ENST00000381342 RASL10AQ92737 203 aa11.36□□□□□ -0.59
SNRPB-201ENST00000381342 C18orf15Q96N68 181 aa11.36□□□□□ -0.59
SNRPB-201ENST00000381342 K7EN84 100 aa11.35□□□□□ -0.59
SNRPB-201ENST00000381342 IL36BQ9NZH7 164 aa11.35□□□□□ -0.59
SNRPB-201ENST00000381342 C19orf71A6NCJ1 209 aa11.34□□□□□ -0.59
SNRPB-201ENST00000381342 C9JQL5 133 aa11.34□□□□□ -0.59
SNRPB-201ENST00000381342 SFTA3P0C7M3 94 aa11.34□□□□□ -0.59
SNRPB-201ENST00000381342 ZNF876PQ49A33 203 aa11.34□□□□□ -0.59
SNRPB-201ENST00000381342 DNLZQ5SXM8 178 aa11.34□□□□□ -0.59
SNRPB-201ENST00000381342 FAM210BQ96KR6 192 aa11.34□□□□□ -0.59
SNRPB-201ENST00000381342 SMIM7Q9BQ49 75 aa11.34□□□□□ -0.59
SNRPB-201ENST00000381342 ARMS2P0C7Q2 107 aa11.33□□□□□ -0.6
SNRPB-201ENST00000381342 POM121L12Q8N7R1 296 aa11.33□□□□□ -0.6
SNRPB-201ENST00000381342 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
SNRPB-201ENST00000381342 DAZAP1Q96EP5 407 aaKnown RBP11.33□□□□□ -0.6
SNRPB-201ENST00000381342 ZNF479Q96JC4 524 aa11.33□□□□□ -0.6
SNRPB-201ENST00000381342 TRAV26-1A0A087WT03 109 aa11.32□□□□□ -0.6
SNRPB-201ENST00000381342 TRAV4A0A0B4J268 109 aa11.32□□□□□ -0.6
SNRPB-201ENST00000381342 A0A0J9YY99 117 aa11.32□□□□□ -0.6
SNRPB-201ENST00000381342 TMEM218A2RU14 115 aa11.32□□□□□ -0.6
SNRPB-201ENST00000381342 CXCL1P09341 107 aa11.32□□□□□ -0.6
SNRPB-201ENST00000381342 P0DMU3 169 aa11.32□□□□□ -0.6
SNRPB-201ENST00000381342 FAM231AP0DMU4 169 aa11.32□□□□□ -0.6
SNRPB-201ENST00000381342 FAM231CP0DMU5 169 aa11.32□□□□□ -0.6
SNRPB-201ENST00000381342 BIN3Q9NQY0 253 aa11.32□□□□□ -0.6
SNRPB-201ENST00000381342 ZNF727A8MUV8 499 aa11.31□□□□□ -0.6
SNRPB-201ENST00000381342 P01737 135 aa11.31□□□□□ -0.6
SNRPB-201ENST00000381342 OR4C5Q8NGB2 326 aa11.31□□□□□ -0.6
SNRPB-201ENST00000381342 OR2D3Q8NGH3 330 aa11.31□□□□□ -0.6
SNRPB-201ENST00000381342 RNASE7Q9H1E1 156 aaKnown RBP11.31□□□□□ -0.6
SNRPB-201ENST00000381342 NUDT3O95989 172 aa11.3□□□□□ -0.6
SNRPB-201ENST00000381342 GZMBP10144 247 aa11.3□□□□□ -0.6
SNRPB-201ENST00000381342 FHL2Q14192 279 aa11.3□□□□□ -0.6
SNRPB-201ENST00000381342 C15orf53Q8NAA6 179 aa11.3□□□□□ -0.6
SNRPB-201ENST00000381342 PTH2Q96A98 100 aa11.3□□□□□ -0.6
SNRPB-201ENST00000381342 SCRT2Q9NQ03 307 aa11.3□□□□□ -0.6
SNRPB-201ENST00000381342 PHLDA3Q9Y5J5 127 aa11.3□□□□□ -0.6
SNRPB-201ENST00000381342 TRGV4A0A0C4DH28 118 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 M0R381 172 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 RS1O15537 224 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 ATP6V1G1O75348 118 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 MED14OSP0DP75 135 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 CFAP126Q5VTH2 177 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 UBE2DNLQ8IWF7 75 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 NUDT10Q8NFP7 164 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 NUDT11Q96G61 164 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 VPS13DQ5THJ4 4388 aa11.29□□□□□ -0.6
SNRPB-201ENST00000381342 MUC21A0A0G2JKD1 596 aa11.28□□□□□ -0.6
SNRPB-201ENST00000381342 MUC21A0A140T8X8 626 aa11.28□□□□□ -0.6
SNRPB-201ENST00000381342 C10orf91Q5T1B1 145 aa11.28□□□□□ -0.6
SNRPB-201ENST00000381342 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
SNRPB-201ENST00000381342 LINC01551Q86U37 167 aa11.28□□□□□ -0.6
SNRPB-201ENST00000381342 SYT8Q8NBV8 401 aa11.28□□□□□ -0.6
SNRPB-201ENST00000381342 OR10AG1Q8NH19 301 aa11.28□□□□□ -0.6
SNRPB-201ENST00000381342 VSIG2Q96IQ7 327 aa11.28□□□□□ -0.6
SNRPB-201ENST00000381342 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
SNRPB-201ENST00000381342 RPP21Q9H633 154 aaKnown RBP11.28□□□□□ -0.6
SNRPB-201ENST00000381342 JPT2Q9H910 190 aa11.28□□□□□ -0.6
SNRPB-201ENST00000381342 HYDINQ4G0P3 5121 aa11.27□□□□□ -0.6
SNRPB-201ENST00000381342 IGHV3-73A0A0B4J1V6 119 aa11.27□□□□□ -0.61
SNRPB-201ENST00000381342 SNAI2O43623 268 aa11.27□□□□□ -0.61
SNRPB-201ENST00000381342 ADCYAP1P18509 176 aa11.27□□□□□ -0.61
SNRPB-201ENST00000381342 RPS20P60866 119 aaKnown RBP11.27□□□□□ -0.61
SNRPB-201ENST00000381342 FAM74A3Q4VXF1 159 aa11.27□□□□□ -0.61
SNRPB-201ENST00000381342 ZFP82Q8N141 532 aa11.27□□□□□ -0.61
SNRPB-201ENST00000381342 TPPP3Q9BW30 176 aa11.27□□□□□ -0.61
SNRPB-201ENST00000381342 PRO0255Q9UI72 69 aa11.27□□□□□ -0.61
SNRPB-201ENST00000381342 F8W036 122 aa11.26□□□□□ -0.61
SNRPB-201ENST00000381342 PAX4O43316 350 aa11.26□□□□□ -0.61
SNRPB-201ENST00000381342 OR5AL1P0C617 328 aa11.26□□□□□ -0.61
SNRPB-201ENST00000381342 IGLC6P0CF74 106 aa11.26□□□□□ -0.61
SNRPB-201ENST00000381342 CRYBA4P53673 196 aa11.26□□□□□ -0.61
SNRPB-201ENST00000381342 PIK3CD-AS1Q5SR53 167 aa11.26□□□□□ -0.61
SNRPB-201ENST00000381342 FER1L6-AS1Q8NA97 138 aa11.26□□□□□ -0.61
SNRPB-201ENST00000381342 HHLA3Q9XRX5 114 aa11.26□□□□□ -0.61
SNRPB-201ENST00000381342 CARHSP1Q9Y2V2 147 aaKnown RBP11.26□□□□□ -0.61
SNRPB-201ENST00000381342 XKRY2A2RUG3 117 aa11.25□□□□□ -0.61
SNRPB-201ENST00000381342 A8MWV9 139 aa11.25□□□□□ -0.61
SNRPB-201ENST00000381342 H3BNG1 76 aa11.25□□□□□ -0.61
SNRPB-201ENST00000381342 NXPH4O95158 308 aa11.25□□□□□ -0.61
SNRPB-201ENST00000381342 S100A1P23297 94 aa11.25□□□□□ -0.61
SNRPB-201ENST00000381342 SSBP4Q9BWG4 385 aaPredicted RBP11.25□□□□□ -0.61
SNRPB-201ENST00000381342 SAMD10Q9BYL1 202 aa11.25□□□□□ -0.61
SNRPB-201ENST00000381342 GATCO43716 136 aaKnown RBP11.24□□□□□ -0.61
SNRPB-201ENST00000381342 GATA1P15976 413 aaPredicted RBP11.24□□□□□ -0.61
SNRPB-201ENST00000381342 ERVFC1-1P60608 527 aa11.24□□□□□ -0.61
SNRPB-201ENST00000381342 SSTP61278 116 aa11.24□□□□□ -0.61
SNRPB-201ENST00000381342 RPL23P62829 140 aaKnown RBP11.24□□□□□ -0.61
SNRPB-201ENST00000381342 SLAQ13239 276 aa11.24□□□□□ -0.61
SNRPB-201ENST00000381342 ADIRFQ15847 76 aa11.24□□□□□ -0.61
SNRPB-201ENST00000381342 TMEM241Q24JQ0 296 aa11.24□□□□□ -0.61
SNRPB-201ENST00000381342 SPANXN1Q5VSR9 72 aa11.24□□□□□ -0.61
SNRPB-201ENST00000381342 FAM231DQ6ZW35 169 aa11.24□□□□□ -0.61
SNRPB-201ENST00000381342 NAT8Q9UHE5 227 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms