RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CLPSL2Q6UWE3 100 aa12.5□□□□□ -0.41
COL2A1-202ENST00000380518 Q71RC1 249 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-202ENST00000380518 SLC25A29Q8N8R3 303 aa12.5□□□□□ -0.41
COL2A1-202ENST00000380518 IGFBPL1Q8WX77 278 aa12.5□□□□□ -0.41
COL2A1-202ENST00000380518 XCL1P47992 114 aa12.49□□□□□ -0.41
COL2A1-202ENST00000380518 DEFB136Q30KP8 78 aa12.49□□□□□ -0.41
COL2A1-202ENST00000380518 NTN5Q8WTR8 489 aaPredicted RBP12.49□□□□□ -0.41
COL2A1-202ENST00000380518 PLA2G2EQ9NZK7 142 aa12.49□□□□□ -0.41
COL2A1-202ENST00000380518 DEFB125Q8N687 156 aa12.49□□□□□ -0.41
COL2A1-202ENST00000380518 SPRY2O43597 315 aa12.49□□□□□ -0.41
COL2A1-202ENST00000380518 HERV-K104P63124 156 aa12.49□□□□□ -0.41
COL2A1-202ENST00000380518 RITA1Q96K30 269 aa12.49□□□□□ -0.41
COL2A1-202ENST00000380518 FAM167A-AS1Q96KT0 104 aa12.49□□□□□ -0.41
COL2A1-202ENST00000380518 ANKHD1Q8IWZ3 2542 aaKnown RBP12.48□□□□□ -0.41
COL2A1-202ENST00000380518 BLCAPP62952 87 aa12.48□□□□□ -0.41
COL2A1-202ENST00000380518 IGHV4-38-2P0DP08 117 aa12.48□□□□□ -0.41
COL2A1-202ENST00000380518 IFITM1P13164 125 aa12.48□□□□□ -0.41
COL2A1-202ENST00000380518 C16orf54Q6UWD8 224 aa12.48□□□□□ -0.41
COL2A1-202ENST00000380518 Q8N9W7 124 aa12.48□□□□□ -0.41
COL2A1-202ENST00000380518 RPL39LQ96EH5 51 aaKnown RBP12.48□□□□□ -0.41
COL2A1-202ENST00000380518 MSRB1Q9NZV6 116 aa12.47□□□□□ -0.41
COL2A1-202ENST00000380518 TANC1Q9C0D5 1861 aa12.47□□□□□ -0.41
COL2A1-202ENST00000380518 LINC01545Q5VT33 79 aa12.47□□□□□ -0.41
COL2A1-202ENST00000380518 IGHV4-30-2A0A087WSY4 118 aa12.47□□□□□ -0.41
COL2A1-202ENST00000380518 IGHG4P01861 327 aa12.47□□□□□ -0.41
COL2A1-202ENST00000380518 CDPF1Q6NVV7 123 aa12.47□□□□□ -0.41
COL2A1-202ENST00000380518 CACNA1AO00555 2505 aa12.46□□□□□ -0.41
COL2A1-202ENST00000380518 A0A0J9YY99 117 aa12.46□□□□□ -0.41
COL2A1-202ENST00000380518 PRSS47A8MTI9 375 aa12.46□□□□□ -0.41
COL2A1-202ENST00000380518 CCL25O15444 150 aa12.46□□□□□ -0.41
COL2A1-202ENST00000380518 CRYGCP07315 174 aa12.46□□□□□ -0.41
COL2A1-202ENST00000380518 WNK1Q9H4A3 2382 aa12.46□□□□□ -0.42
COL2A1-202ENST00000380518 TINCRA0A1B0GVN0 87 aa12.46□□□□□ -0.42
COL2A1-202ENST00000380518 SLURP1P55000 103 aa12.46□□□□□ -0.42
COL2A1-202ENST00000380518 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.42
COL2A1-202ENST00000380518 ANKRD29Q8N6D5 301 aa12.46□□□□□ -0.42
COL2A1-202ENST00000380518 NUPR1O60356 82 aa12.45□□□□□ -0.42
COL2A1-202ENST00000380518 IGLV1-47P01700 117 aa12.45□□□□□ -0.42
COL2A1-202ENST00000380518 TNCP24821 2201 aa12.45□□□□□ -0.42
COL2A1-202ENST00000380518 ZFP2Q6ZN57 461 aa12.45□□□□□ -0.42
COL2A1-202ENST00000380518 DEFB113Q30KQ7 82 aa12.45□□□□□ -0.42
COL2A1-202ENST00000380518 WI2-2373I1.2A0A1W2PRP0 233 aa12.44□□□□□ -0.42
COL2A1-202ENST00000380518 ANKRD39Q53RE8 183 aa12.44□□□□□ -0.42
COL2A1-202ENST00000380518 KLF2Q9Y5W3 355 aaPredicted RBP12.44□□□□□ -0.42
COL2A1-202ENST00000380518 TRAV12-1A0A0B4J245 112 aa12.44□□□□□ -0.42
COL2A1-202ENST00000380518 C5orf38Q86SI9 138 aa12.44□□□□□ -0.42
COL2A1-202ENST00000380518 C5orf56Q8N8D9 126 aa12.44□□□□□ -0.42
COL2A1-202ENST00000380518 A0A0J9YXV3 536 aa12.44□□□□□ -0.42
COL2A1-202ENST00000380518 TEX22C9J3V5 150 aa12.44□□□□□ -0.42
COL2A1-202ENST00000380518 LINC00173Q6ZV60 143 aa12.44□□□□□ -0.42
COL2A1-202ENST00000380518 IGKV2D-24A0A075B6R9 120 aa12.43□□□□□ -0.42
COL2A1-202ENST00000380518 C10orf105Q8TEF2 133 aa12.43□□□□□ -0.42
COL2A1-202ENST00000380518 IGLV2-23P01705 113 aa12.43□□□□□ -0.42
COL2A1-202ENST00000380518 CGB3P0DN86 165 aa12.43□□□□□ -0.42
COL2A1-202ENST00000380518 IGKV1OR2-108A0A075B7D4 117 aa12.43□□□□□ -0.42
COL2A1-202ENST00000380518 BAALC-AS2P0C853 105 aa12.43□□□□□ -0.42
COL2A1-202ENST00000380518 C15orf53Q8NAA6 179 aa12.43□□□□□ -0.42
COL2A1-202ENST00000380518 GTSF1Q8WW33 167 aa12.43□□□□□ -0.42
COL2A1-202ENST00000380518 C16orf74Q96GX8 76 aa12.43□□□□□ -0.42
COL2A1-202ENST00000380518 CSPG4Q6UVK1 2322 aa12.42□□□□□ -0.42
COL2A1-202ENST00000380518 CHD3Q12873 2000 aaKnown RBP12.42□□□□□ -0.42
COL2A1-202ENST00000380518 Q6ZQT7 251 aa12.42□□□□□ -0.42
COL2A1-202ENST00000380518 CRYBA4P53673 196 aa12.42□□□□□ -0.42
COL2A1-202ENST00000380518 SEM1Q6ZVN7 128 aa12.42□□□□□ -0.42
COL2A1-202ENST00000380518 ORMDL1Q9P0S3 153 aa12.42□□□□□ -0.42
COL2A1-202ENST00000380518 K7EMT4 169 aa12.42□□□□□ -0.42
COL2A1-202ENST00000380518 CUL9Q8IWT3 2517 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 IGLL5B9A064 214 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 C9orf47Q6ZRZ4 202 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 Q6ZVH6 145 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 SPRY4Q9C004 299 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 TRAV4A0A0B4J268 109 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 DAZ2Q13117 558 aaKnown RBP12.41□□□□□ -0.42
COL2A1-202ENST00000380518 DAZ4Q86SG3 579 aaKnown RBP12.41□□□□□ -0.42
COL2A1-202ENST00000380518 DAZ3Q9NR90 486 aaKnown RBP12.41□□□□□ -0.42
COL2A1-202ENST00000380518 PRAC2D3DTV9 90 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 ATP6V0E2Q8NHE4 81 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 C1orf43Q9BWL3 253 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 ZMAT4Q9H898 229 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 K7EQD1 137 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 C9orf66Q5T8R8 295 aa12.41□□□□□ -0.42
COL2A1-202ENST00000380518 IGLV2-14P01704 120 aa12.4□□□□□ -0.42
COL2A1-202ENST00000380518 CGB7P0DN87 165 aa12.4□□□□□ -0.42
COL2A1-202ENST00000380518 ODF3L1Q8IXM7 274 aa12.4□□□□□ -0.42
COL2A1-202ENST00000380518 ADORA2A-AS1P86434 159 aa12.4□□□□□ -0.42
COL2A1-202ENST00000380518 MRPL23Q16540 153 aaKnown RBP12.4□□□□□ -0.42
COL2A1-202ENST00000380518 PIFOQ8TCI5 191 aa12.4□□□□□ -0.42
COL2A1-202ENST00000380518 NUP210Q8TEM1 1887 aaPredicted RBP12.4□□□□□ -0.43
COL2A1-202ENST00000380518 GYPEP15421 78 aa12.4□□□□□ -0.43
COL2A1-202ENST00000380518 SONP18583 2426 aaKnown RBP12.4□□□□□ -0.43
COL2A1-202ENST00000380518 DENND4CQ5VZ89 1909 aa12.4□□□□□ -0.43
COL2A1-202ENST00000380518 Q8N7P7 452 aa12.39□□□□□ -0.43
COL2A1-202ENST00000380518 ATP5G1P05496 136 aa12.39□□□□□ -0.43
COL2A1-202ENST00000380518 TDRG1Q3Y452 100 aa12.39□□□□□ -0.43
COL2A1-202ENST00000380518 Q8N1Y9 231 aa12.39□□□□□ -0.43
COL2A1-202ENST00000380518 MRPL36Q9P0J6 103 aaKnown RBP12.39□□□□□ -0.43
COL2A1-202ENST00000380518 TEX48A0A1B0GUV7 120 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 A4D1N5 150 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 TRACP01848 142 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 CTRLP40313 264 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms