RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 TMEM61Q8N0U2 210 aa8.95□□□□□ -0.98
USP3-202ENST00000380324 IGHV4-4A0A075B6R2 117 aa8.94□□□□□ -0.98
USP3-202ENST00000380324 C7orf71A4D174 169 aa8.94□□□□□ -0.98
USP3-202ENST00000380324 OR4C46A6NHA9 309 aa8.94□□□□□ -0.98
USP3-202ENST00000380324 DYNLRB2Q8TF09 96 aa8.94□□□□□ -0.98
USP3-202ENST00000380324 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
USP3-202ENST00000380324 CRXO43186 299 aaPredicted RBP8.94□□□□□ -0.98
USP3-202ENST00000380324 CD7P09564 240 aa8.94□□□□□ -0.98
USP3-202ENST00000380324 CD28P10747 220 aa8.94□□□□□ -0.98
USP3-202ENST00000380324 LEPP41159 167 aa8.94□□□□□ -0.98
USP3-202ENST00000380324 C14orf178Q8N769 122 aaPredicted RBP8.94□□□□□ -0.98
USP3-202ENST00000380324 OTOGQ6ZRI0 2925 aa8.94□□□□□ -0.98
USP3-202ENST00000380324 C20orf202A1L168 122 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 KNCNA6PVL3 124 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 DEFB131AP59861 70 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 ZNF124Q15973 351 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 ZNF747Q9BV97 191 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 NIPBLQ6KC79 2804 aaeCLIP8.93□□□□□ -0.98
USP3-202ENST00000380324 SETXQ7Z333 2677 aaKnown RBP8.93□□□□□ -0.98
USP3-202ENST00000380324 HBDP02042 147 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 MGPP08493 103 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 CDKN1BP46527 198 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 FOXI2Q6ZQN5 318 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 OR2K2Q8NGT1 345 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 RAX2Q96IS3 184 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 LAMTOR2Q9Y2Q5 125 aa8.93□□□□□ -0.98
USP3-202ENST00000380324 EREGO14944 169 aa8.92□□□□□ -0.98
USP3-202ENST00000380324 RNASE1P07998 156 aaKnown RBP8.92□□□□□ -0.98
USP3-202ENST00000380324 ODF3Q96PU9 254 aa8.92□□□□□ -0.98
USP3-202ENST00000380324 CITED2Q99967 270 aaPredicted RBP8.92□□□□□ -0.98
USP3-202ENST00000380324 MIEN1Q9BRT3 115 aa8.92□□□□□ -0.98
USP3-202ENST00000380324 SCRT2Q9NQ03 307 aa8.92□□□□□ -0.98
USP3-202ENST00000380324 NRACQ8N912 160 aa8.92□□□□□ -0.98
USP3-202ENST00000380324 LINC01006Q8NI28 216 aa8.92□□□□□ -0.98
USP3-202ENST00000380324 AP1S3Q96PC3 154 aa8.92□□□□□ -0.98
USP3-202ENST00000380324 TRAV9-2A0A087WT02 112 aa8.91□□□□□ -0.98
USP3-202ENST00000380324 MED14OSP0DP75 135 aa8.91□□□□□ -0.98
USP3-202ENST00000380324 DPH3P1Q9H4G8 78 aa8.91□□□□□ -0.98
USP3-202ENST00000380324 NXT2Q9NPJ8 142 aaKnown RBP8.91□□□□□ -0.98
USP3-202ENST00000380324 hDV102S1A0JD36 115 aa8.91□□□□□ -0.98
USP3-202ENST00000380324 DUSP14O95147 198 aaKnown RBP8.91□□□□□ -0.98
USP3-202ENST00000380324 IGLL1P15814 213 aa8.91□□□□□ -0.98
USP3-202ENST00000380324 CD300EQ496F6 205 aaPredicted RBP8.91□□□□□ -0.98
USP3-202ENST00000380324 PET117Q6UWS5 81 aa8.91□□□□□ -0.98
USP3-202ENST00000380324 ZNF418Q8TF45 676 aaPredicted RBP8.91□□□□□ -0.98
USP3-202ENST00000380324 C18orf15Q96N68 181 aa8.91□□□□□ -0.98
USP3-202ENST00000380324 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
USP3-202ENST00000380324 TSPOP30536 169 aa8.9□□□□□ -0.98
USP3-202ENST00000380324 SCGB2A2Q13296 93 aa8.9□□□□□ -0.98
USP3-202ENST00000380324 AMTNQ6UX39 209 aa8.9□□□□□ -0.98
USP3-202ENST00000380324 CCL24O00175 119 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 Q8N1Y9 231 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 RPL39LQ96EH5 51 aaKnown RBP8.89□□□□□ -0.99
USP3-202ENST00000380324 MRAP2Q96G30 205 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 JPT2Q9H910 190 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 MDFICQ9P1T7 246 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 TP73-AS1Q9UF72 201 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 HTN1P15515 57 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 DEFB114Q30KQ6 69 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 LINC01545Q5VT33 79 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 SNHG12Q9BXW3 62 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 MAP6D1Q9H9H5 199 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 JMJD1CQ15652 2540 aa8.89□□□□□ -0.99
USP3-202ENST00000380324 TCAPO15273 167 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 HILS1P60008 231 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 FHL3Q13643 280 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 Q6ZN92 141 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 Q8N8P6 123 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 UQCR10Q9UDW1 63 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 IGLV2-18A0A075B6J9 118 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 IGHV1OR15-1A0A075B7D0 117 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 A0A087WWL8 130 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 IGHV3-16A0A0C4DH30 117 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 NXPH4O95158 308 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 RBMY1A1P0DJD3 496 aaKnown RBP8.88□□□□□ -0.99
USP3-202ENST00000380324 RBMY1CP0DJD4 496 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 HLA-DRB4P13762 266 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 RBMY1FQ15415 496 aaKnown RBP8.88□□□□□ -0.99
USP3-202ENST00000380324 TMEM158Q8WZ71 300 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 RASL10AQ92737 203 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 IFI27L1Q96BM0 104 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 HLA-DRB4X5D2U9 266 aa8.88□□□□□ -0.99
USP3-202ENST00000380324 RBMY1BA6NDE4 496 aaKnown RBP8.87□□□□□ -0.99
USP3-202ENST00000380324 RBMY1EA6NEQ0 496 aaKnown RBP8.87□□□□□ -0.99
USP3-202ENST00000380324 PRSS47A8MTI9 375 aa8.87□□□□□ -0.99
USP3-202ENST00000380324 RBMY1DP0C7P1 496 aaKnown RBP8.87□□□□□ -0.99
USP3-202ENST00000380324 SMIM17P0DL12 118 aa8.87□□□□□ -0.99
USP3-202ENST00000380324 FOSL1P15407 271 aa8.87□□□□□ -0.99
USP3-202ENST00000380324 FAM74A4Q5TZK3 123 aa8.87□□□□□ -0.99
USP3-202ENST00000380324 TSSC4Q9Y5U2 329 aaPredicted RBP8.87□□□□□ -0.99
USP3-202ENST00000380324 NOTCH3Q9UM47 2321 aa8.87□□□□□ -0.99
USP3-202ENST00000380324 LINC01546A6NGU7 62 aa8.87□□□□□ -0.99
USP3-202ENST00000380324 HSBP1L1C9JCN9 74 aa8.87□□□□□ -0.99
USP3-202ENST00000380324 H3BMM0 161 aa8.87□□□□□ -0.99
USP3-202ENST00000380324 LY6G6DO95868 133 aa8.87□□□□□ -0.99
USP3-202ENST00000380324 SMIM2Q9BVW6 85 aa8.87□□□□□ -0.99
USP3-202ENST00000380324 FCER1GP30273 86 aa8.86□□□□□ -0.99
USP3-202ENST00000380324 HNRNPA3P51991 378 aaKnown RBP8.86□□□□□ -0.99
USP3-202ENST00000380324 SUMO2P61956 95 aaKnown RBP8.86□□□□□ -0.99
USP3-202ENST00000380324 BATFQ16520 125 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms